Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146300401

Identifier: 146300401

GI number: 146300401

Start: 3149473

End: 3150426

Strand: Reverse

Name: 146300401

Synonym: Fjoh_2648

Alternate gene names: NA

Gene position: 3150426-3149473 (Counterclockwise)

Preceding gene: 146300402

Following gene: 146300400

Centisome position: 51.67

GC content: 42.03

Gene sequence:

>954_bases
ATGAAAACGCTATTGCTTATATTTTGTTTTGCAGCTTCCGGCCTATGTTATCCGCAGAATCAGCGATATACACCTAAGGT
ACAGCTGGCTATTGAAACATATGCATTTATTCAAGGACAGAAAGCTTCCCTTGCAAAAGTGGCTGCGCAGTTCCCTGTGG
TTGCCCAAGAGGTAAGATCTTTGGAGAAAAAAGCTCAGGCAATATATGGACGGGCAGAAAAAAATATAGAGCAGTATCTC
AGGAATGAACTAAAAGAAGATCAATTCTCCATCCTTAAAAAAAACATAAGGCTGCTGGCCGAGGATCAGCTGAAGGAGCC
AATCCAAAAGAAAGAACATGCCATCGATTTTTTGGAGTCGGTCAGGGACAAGATAGATATGGATGAACATGCCAATATTC
CCAAAGGCATCATTTCTTTCGCCTATCAGGATGTTCCCCATCAGGAAATAATCGACGGCCACATCAAAAACTTCACAACC
CAGGGCCATCCAAAAGCAGATGAATCGATAGTAACCTTTCCCGTACCTAAAAGCTGGATCGCTCAGGAAGGTGAAATGCC
CGCAACGGTCCAGCAGTTTACAAGCTTTGACGGGAAGGGAAACGAAAAAATCATGATGGTAATTCATAAGCTTGCCAAAG
AAGACCGTAATCTGCATCTTAATGAAAAGTCTGTTTCTGAAATGATTCCTCCGACTGCGCGATTGATAAGAATAGAAGAA
GTAACAATAGACGACATTCCCGGAATAATGGTTGAGGTAGAAGAAACACTTGATATTGCGGTAAATAAAATGAAAGTGCG
CATGATGCAGTTTATGGTTACCGATCAGGAAAAATTATACTGCCTCCAGGGAAGCATAGGTCCCGTAGCTCTGGAAGAGA
ATCTGGATCACCAGTTAAGAAAATTCGAACCGTTGTTTCGTCTTGTAGCAGAAGGTGCAGAGATAGAATTTTAA

Upstream 100 bases:

>100_bases
CTTATAAAGTGGGTCTTACTATAATGTTTTTTTAAGTTTTGCATGGAGATTATTTTGACCGGCCTCAATCAATAATTAGC
TTAATTTGTAGATCTTGCCA

Downstream 100 bases:

>100_bases
TCGGCAGTCCTCCTTTCAAAACTGTGATTACGGATACTGACGGGGAAATTCATGCAGATTTTAGTTTTCTGACCGCTGCC
TCTGTTCTATTTGATGCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MKTLLLIFCFAASGLCYPQNQRYTPKVQLAIETYAFIQGQKASLAKVAAQFPVVAQEVRSLEKKAQAIYGRAEKNIEQYL
RNELKEDQFSILKKNIRLLAEDQLKEPIQKKEHAIDFLESVRDKIDMDEHANIPKGIISFAYQDVPHQEIIDGHIKNFTT
QGHPKADESIVTFPVPKSWIAQEGEMPATVQQFTSFDGKGNEKIMMVIHKLAKEDRNLHLNEKSVSEMIPPTARLIRIEE
VTIDDIPGIMVEVEETLDIAVNKMKVRMMQFMVTDQEKLYCLQGSIGPVALEENLDHQLRKFEPLFRLVAEGAEIEF

Sequences:

>Translated_317_residues
MKTLLLIFCFAASGLCYPQNQRYTPKVQLAIETYAFIQGQKASLAKVAAQFPVVAQEVRSLEKKAQAIYGRAEKNIEQYL
RNELKEDQFSILKKNIRLLAEDQLKEPIQKKEHAIDFLESVRDKIDMDEHANIPKGIISFAYQDVPHQEIIDGHIKNFTT
QGHPKADESIVTFPVPKSWIAQEGEMPATVQQFTSFDGKGNEKIMMVIHKLAKEDRNLHLNEKSVSEMIPPTARLIRIEE
VTIDDIPGIMVEVEETLDIAVNKMKVRMMQFMVTDQEKLYCLQGSIGPVALEENLDHQLRKFEPLFRLVAEGAEIEF
>Mature_317_residues
MKTLLLIFCFAASGLCYPQNQRYTPKVQLAIETYAFIQGQKASLAKVAAQFPVVAQEVRSLEKKAQAIYGRAEKNIEQYL
RNELKEDQFSILKKNIRLLAEDQLKEPIQKKEHAIDFLESVRDKIDMDEHANIPKGIISFAYQDVPHQEIIDGHIKNFTT
QGHPKADESIVTFPVPKSWIAQEGEMPATVQQFTSFDGKGNEKIMMVIHKLAKEDRNLHLNEKSVSEMIPPTARLIRIEE
VTIDDIPGIMVEVEETLDIAVNKMKVRMMQFMVTDQEKLYCLQGSIGPVALEENLDHQLRKFEPLFRLVAEGAEIEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36226; Mature: 36226

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLLLIFCFAASGLCYPQNQRYTPKVQLAIETYAFIQGQKASLAKVAAQFPVVAQEVRS
CHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHCHHHHHHHHH
LEKKAQAIYGRAEKNIEQYLRNELKEDQFSILKKNIRLLAEDQLKEPIQKKEHAIDFLES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRDKIDMDEHANIPKGIISFAYQDVPHQEIIDGHIKNFTTQGHPKADESIVTFPVPKSWI
HHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHH
AQEGEMPATVQQFTSFDGKGNEKIMMVIHKLAKEDRNLHLNEKSVSEMIPPTARLIRIEE
HCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHEEEEEE
VTIDDIPGIMVEVEETLDIAVNKMKVRMMQFMVTDQEKLYCLQGSIGPVALEENLDHQLR
EECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCEEEHHHHHHHHH
KFEPLFRLVAEGAEIEF
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKTLLLIFCFAASGLCYPQNQRYTPKVQLAIETYAFIQGQKASLAKVAAQFPVVAQEVRS
CHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHCHHHHHHHHH
LEKKAQAIYGRAEKNIEQYLRNELKEDQFSILKKNIRLLAEDQLKEPIQKKEHAIDFLES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRDKIDMDEHANIPKGIISFAYQDVPHQEIIDGHIKNFTTQGHPKADESIVTFPVPKSWI
HHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHH
AQEGEMPATVQQFTSFDGKGNEKIMMVIHKLAKEDRNLHLNEKSVSEMIPPTARLIRIEE
HCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHEEEEEE
VTIDDIPGIMVEVEETLDIAVNKMKVRMMQFMVTDQEKLYCLQGSIGPVALEENLDHQLR
EECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCEEEHHHHHHHHH
KFEPLFRLVAEGAEIEF
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA