| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300401
Identifier: 146300401
GI number: 146300401
Start: 3149473
End: 3150426
Strand: Reverse
Name: 146300401
Synonym: Fjoh_2648
Alternate gene names: NA
Gene position: 3150426-3149473 (Counterclockwise)
Preceding gene: 146300402
Following gene: 146300400
Centisome position: 51.67
GC content: 42.03
Gene sequence:
>954_bases ATGAAAACGCTATTGCTTATATTTTGTTTTGCAGCTTCCGGCCTATGTTATCCGCAGAATCAGCGATATACACCTAAGGT ACAGCTGGCTATTGAAACATATGCATTTATTCAAGGACAGAAAGCTTCCCTTGCAAAAGTGGCTGCGCAGTTCCCTGTGG TTGCCCAAGAGGTAAGATCTTTGGAGAAAAAAGCTCAGGCAATATATGGACGGGCAGAAAAAAATATAGAGCAGTATCTC AGGAATGAACTAAAAGAAGATCAATTCTCCATCCTTAAAAAAAACATAAGGCTGCTGGCCGAGGATCAGCTGAAGGAGCC AATCCAAAAGAAAGAACATGCCATCGATTTTTTGGAGTCGGTCAGGGACAAGATAGATATGGATGAACATGCCAATATTC CCAAAGGCATCATTTCTTTCGCCTATCAGGATGTTCCCCATCAGGAAATAATCGACGGCCACATCAAAAACTTCACAACC CAGGGCCATCCAAAAGCAGATGAATCGATAGTAACCTTTCCCGTACCTAAAAGCTGGATCGCTCAGGAAGGTGAAATGCC CGCAACGGTCCAGCAGTTTACAAGCTTTGACGGGAAGGGAAACGAAAAAATCATGATGGTAATTCATAAGCTTGCCAAAG AAGACCGTAATCTGCATCTTAATGAAAAGTCTGTTTCTGAAATGATTCCTCCGACTGCGCGATTGATAAGAATAGAAGAA GTAACAATAGACGACATTCCCGGAATAATGGTTGAGGTAGAAGAAACACTTGATATTGCGGTAAATAAAATGAAAGTGCG CATGATGCAGTTTATGGTTACCGATCAGGAAAAATTATACTGCCTCCAGGGAAGCATAGGTCCCGTAGCTCTGGAAGAGA ATCTGGATCACCAGTTAAGAAAATTCGAACCGTTGTTTCGTCTTGTAGCAGAAGGTGCAGAGATAGAATTTTAA
Upstream 100 bases:
>100_bases CTTATAAAGTGGGTCTTACTATAATGTTTTTTTAAGTTTTGCATGGAGATTATTTTGACCGGCCTCAATCAATAATTAGC TTAATTTGTAGATCTTGCCA
Downstream 100 bases:
>100_bases TCGGCAGTCCTCCTTTCAAAACTGTGATTACGGATACTGACGGGGAAATTCATGCAGATTTTAGTTTTCTGACCGCTGCC TCTGTTCTATTTGATGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MKTLLLIFCFAASGLCYPQNQRYTPKVQLAIETYAFIQGQKASLAKVAAQFPVVAQEVRSLEKKAQAIYGRAEKNIEQYL RNELKEDQFSILKKNIRLLAEDQLKEPIQKKEHAIDFLESVRDKIDMDEHANIPKGIISFAYQDVPHQEIIDGHIKNFTT QGHPKADESIVTFPVPKSWIAQEGEMPATVQQFTSFDGKGNEKIMMVIHKLAKEDRNLHLNEKSVSEMIPPTARLIRIEE VTIDDIPGIMVEVEETLDIAVNKMKVRMMQFMVTDQEKLYCLQGSIGPVALEENLDHQLRKFEPLFRLVAEGAEIEF
Sequences:
>Translated_317_residues MKTLLLIFCFAASGLCYPQNQRYTPKVQLAIETYAFIQGQKASLAKVAAQFPVVAQEVRSLEKKAQAIYGRAEKNIEQYL RNELKEDQFSILKKNIRLLAEDQLKEPIQKKEHAIDFLESVRDKIDMDEHANIPKGIISFAYQDVPHQEIIDGHIKNFTT QGHPKADESIVTFPVPKSWIAQEGEMPATVQQFTSFDGKGNEKIMMVIHKLAKEDRNLHLNEKSVSEMIPPTARLIRIEE VTIDDIPGIMVEVEETLDIAVNKMKVRMMQFMVTDQEKLYCLQGSIGPVALEENLDHQLRKFEPLFRLVAEGAEIEF >Mature_317_residues MKTLLLIFCFAASGLCYPQNQRYTPKVQLAIETYAFIQGQKASLAKVAAQFPVVAQEVRSLEKKAQAIYGRAEKNIEQYL RNELKEDQFSILKKNIRLLAEDQLKEPIQKKEHAIDFLESVRDKIDMDEHANIPKGIISFAYQDVPHQEIIDGHIKNFTT QGHPKADESIVTFPVPKSWIAQEGEMPATVQQFTSFDGKGNEKIMMVIHKLAKEDRNLHLNEKSVSEMIPPTARLIRIEE VTIDDIPGIMVEVEETLDIAVNKMKVRMMQFMVTDQEKLYCLQGSIGPVALEENLDHQLRKFEPLFRLVAEGAEIEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36226; Mature: 36226
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLLLIFCFAASGLCYPQNQRYTPKVQLAIETYAFIQGQKASLAKVAAQFPVVAQEVRS CHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHCHHHHHHHHH LEKKAQAIYGRAEKNIEQYLRNELKEDQFSILKKNIRLLAEDQLKEPIQKKEHAIDFLES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRDKIDMDEHANIPKGIISFAYQDVPHQEIIDGHIKNFTTQGHPKADESIVTFPVPKSWI HHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHH AQEGEMPATVQQFTSFDGKGNEKIMMVIHKLAKEDRNLHLNEKSVSEMIPPTARLIRIEE HCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHEEEEEE VTIDDIPGIMVEVEETLDIAVNKMKVRMMQFMVTDQEKLYCLQGSIGPVALEENLDHQLR EECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCEEEHHHHHHHHH KFEPLFRLVAEGAEIEF HHHHHHHHHHCCCCCCC >Mature Secondary Structure MKTLLLIFCFAASGLCYPQNQRYTPKVQLAIETYAFIQGQKASLAKVAAQFPVVAQEVRS CHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHCHHHHHHHHH LEKKAQAIYGRAEKNIEQYLRNELKEDQFSILKKNIRLLAEDQLKEPIQKKEHAIDFLES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRDKIDMDEHANIPKGIISFAYQDVPHQEIIDGHIKNFTTQGHPKADESIVTFPVPKSWI HHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHH AQEGEMPATVQQFTSFDGKGNEKIMMVIHKLAKEDRNLHLNEKSVSEMIPPTARLIRIEE HCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHEEEEEE VTIDDIPGIMVEVEETLDIAVNKMKVRMMQFMVTDQEKLYCLQGSIGPVALEENLDHQLR EECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCEEEHHHHHHHHH KFEPLFRLVAEGAEIEF HHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA