| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300131
Identifier: 146300131
GI number: 146300131
Start: 2845435
End: 2845962
Strand: Reverse
Name: 146300131
Synonym: Fjoh_2376
Alternate gene names: NA
Gene position: 2845962-2845435 (Counterclockwise)
Preceding gene: 146300142
Following gene: 146300129
Centisome position: 46.68
GC content: 31.44
Gene sequence:
>528_bases ATGAAATCAAAACTTATTACCTTGACAGCTTGTTTATCAATCTTTTTTACTTCTTGTGATGCTGTTGATGATTTATTGAC GTTTACTATATCGAATAACACTTCGATAAAAATTCAAAGCACATCACCTATTAATCTGCCGTCGGAAATAATCACTCCGG ATGTTACTACTAATTCTACTGCTGAATTTGAAAACAACAAAACCAAAGCCAATCTGGTAAAAGATGTACATATCAAATCG CTTAAGCTTTCTATTTCTGATCCTTCAGATAAAACTTTTACTTTTTTAAAATCGGTTCACATATATATATCGACTACTAA TTCTGACGAAATAGAATTGGCTTATCTGGATAACATCAACTCATCAAGCAGCGAAATTGATTTGGTTTGTACTGATGCAA GATTAGACCAGTACATTAAAGCTGACAGCTATAAAATTAGAACTAAGGTTACTCTTAAAGAAACTCTTACTAAAGATGTA ACGGTTAAAGCTGATATGAAGTTTAAAGTTACTGCAGATCCTTTTTAA
Upstream 100 bases:
>100_bases ATTTGCTTTGTTCCTTTGAACCTTTGCATCTTTGAAAAAAAACAAAAAACCAAACAATCCAAAAATTCGTATCTGTAGAA AAACCTATTTAAATTAAACT
Downstream 100 bases:
>100_bases TTTAAGGTTCTAAGGTGCTAAGTTTATTTTAAGGATTTAGACACAATAAAAAAAGAGGTTCTAAAATTAGAACCTCTTTT TTTTATTATATTTTTCCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MKSKLITLTACLSIFFTSCDAVDDLLTFTISNNTSIKIQSTSPINLPSEIITPDVTTNSTAEFENNKTKANLVKDVHIKS LKLSISDPSDKTFTFLKSVHIYISTTNSDEIELAYLDNINSSSSEIDLVCTDARLDQYIKADSYKIRTKVTLKETLTKDV TVKADMKFKVTADPF
Sequences:
>Translated_175_residues MKSKLITLTACLSIFFTSCDAVDDLLTFTISNNTSIKIQSTSPINLPSEIITPDVTTNSTAEFENNKTKANLVKDVHIKS LKLSISDPSDKTFTFLKSVHIYISTTNSDEIELAYLDNINSSSSEIDLVCTDARLDQYIKADSYKIRTKVTLKETLTKDV TVKADMKFKVTADPF >Mature_175_residues MKSKLITLTACLSIFFTSCDAVDDLLTFTISNNTSIKIQSTSPINLPSEIITPDVTTNSTAEFENNKTKANLVKDVHIKS LKLSISDPSDKTFTFLKSVHIYISTTNSDEIELAYLDNINSSSSEIDLVCTDARLDQYIKADSYKIRTKVTLKETLTKDV TVKADMKFKVTADPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19461; Mature: 19461
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKLITLTACLSIFFTSCDAVDDLLTFTISNNTSIKIQSTSPINLPSEIITPDVTTNST CCCCEEHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCCCHHHCCCCCCCCCC AEFENNKTKANLVKDVHIKSLKLSISDPSDKTFTFLKSVHIYISTTNSDEIELAYLDNIN CCCCCCCCHHHHEEEEEEEEEEEEECCCCCHHEEEEEEEEEEEEECCCCEEEEEEECCCC SSSSEIDLVCTDARLDQYIKADSYKIRTKVTLKETLTKDVTVKADMKFKVTADPF CCCCEEEEEEECCHHHHHHCCCCEEEEEEEEEHHHCCCCEEEEECEEEEEECCCC >Mature Secondary Structure MKSKLITLTACLSIFFTSCDAVDDLLTFTISNNTSIKIQSTSPINLPSEIITPDVTTNST CCCCEEHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCCCHHHCCCCCCCCCC AEFENNKTKANLVKDVHIKSLKLSISDPSDKTFTFLKSVHIYISTTNSDEIELAYLDNIN CCCCCCCCHHHHEEEEEEEEEEEEECCCCCHHEEEEEEEEEEEEECCCCEEEEEEECCCC SSSSEIDLVCTDARLDQYIKADSYKIRTKVTLKETLTKDVTVKADMKFKVTADPF CCCCEEEEEEECCHHHHHHCCCCEEEEEEEEEHHHCCCCEEEEECEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA