| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is ppsA [C]
Identifier: 146300142
GI number: 146300142
Start: 2861026
End: 2862903
Strand: Reverse
Name: ppsA [C]
Synonym: Fjoh_2387
Alternate gene names: 146300142
Gene position: 2862903-2861026 (Counterclockwise)
Preceding gene: 146300147
Following gene: 146300131
Centisome position: 46.96
GC content: 30.99
Gene sequence:
>1878_bases ATGAAAAAATACATTTACAGCTTGTTTTTCTTTCTCATTTTTATGTCTTTAAGTGCGCAGAGATATTCTTCATCATTAGA AAATTACGAAGCATATAAGGCATTTAGAGGAAAACCTTTGTCTGATAAATTCTCGAATATCGTATCTGTAAAAGTAATTT ACGATTTACGAAAACAGAAAATGTATTATTTCAACAGCACCTTAATTCCACTTCATTATGATTTCGTAATTAATTATCTG CATTACAATCAGGATTTAGAAGTTTTTAATAATGATAATTACAGCAATACTCAAAAAAACCGCGATTTTTTACTTGGAAA TCTAAATCATATTAAAGGAACTGATAAATGGATTTTTGAATTGGCAGCTTCAGATCACATGCCTGTTGAACTTATAGAAC GATTTTTCAATCTGGTTAAAAAATCAACTTTTATTGGCGAAAACCTAAAGTTTTATCTCAATAATCCAGAACAAATGGAA TGGTTTCGTTTGGAACAGTTTAAAATACCTTGTGTAAAATCAGATTATATTTTTAATGAAATACAATATCAGGAAGTCGT TTCCGGAACCAATATTGGTATTTTAAGACAATACAAAATCAAGGATTTAGAAAAAGTAAAACCTAATCCGGATGAAATTG TTGTTTTAGACGGAACGCCGGATATTTTGCCAAACGTAAGAGGAATTATAGTCAACGAACTCCAAACGCCGCTAAGTCAT TTGGTGCTTTTAGGCAAAAACAGAAAAATTCCAATTATGGCATATACAATGGCCTTAAAAGATGAAAACATAAAGAAACT AATTTCTAAAAAAGTAGAATTAAAAATCAAGTCTGATACTTTTTTTATTAAAGAAACTGATAAAAAAATAGTCCTTAAAA CGAATTCAAAAAAGAAAAAACTCACTATTGATAACACGGTTACAGATTTAGTAGATTTATCTAAAATTCCAAAAAAAGGA GTAAATTATATTGGATCTAAGGCGCAGAACATGTCGTATTTAATTGCGATATCTAAAGAAATTCCGTTTAGAACTCCAGA AGATGCACATGCCATTCCGTTTTATTTTTATACAAAACATATTCAAAAAGAATCGATTTCGCCTCTAATAAAGGAGCTTT TGGCATTTCCTAATAAAGATTCTACGGTTTGGATTAATCAGCAGTTAAAAAAAATACGCGATGCCATTAAAAAAGAACCT GTAGATCCTGAATTAATTTCTAAACTGAATCTGGCTTTTAAAAATGCTAAATTCAAAAATTTCAGATTCCGCTCGTCAAC AAATGCGGAAGATTTGGATGATTTTAACGGGGCAGGTTTATATGATTCTAAAACCGGAATTTTAGGCGACAGTATTAAAA CATTTGAAAAAGCAATTAAACAAGTCTGGGCAAGTGTCTGGAATGAAGCTTCATATAATGAAAGAGAACTATTTGGAATC GATCAGCAGAATATTGCAATGGGTGTTTTGGTTCACCGTTCTTTTCCAGATGAACTGGCAAATGGCGTTGTGATTACAAA GAATATTTTCAGACAAAATTTTCCAGGAATTACAGTAAATGTTCAAAAAGGAGAAAACTCAGTTGTAAAGCCGGAAAAAG GTGAAATATGCGAACAGTTTGTGGCTTATCACTTTAATTCCGGAACTAACGATGATGATTTTGATGTTGATTATACTTCA AACTCAAATCTAAATGACAATGAACCTTTGCTAAGCAGAAAAGAAATGAGCCGGCTTTTTATGGTCAGTAAAAAAATTGA AGAAAAGATGTATCGTTATTGGCGAAAAAGTCTATTTCATCCTGTAGATATCGAATTTAAAATTGTGGGAGAAAATCGGG ATTTATACATTAAACAGGTTCGCCCTTTTAATGATTAG
Upstream 100 bases:
>100_bases TATTTTAGAAAATCGTAATGGTTTTGATTGGTTTATATAATCCGGTGGTAGATAAAACTTATGGTTTAAATACTTACTTT TAATATTCAATAAAATTGTC
Downstream 100 bases:
>100_bases GTACAATTGACATTTAGGCTATCGGTGGCGAAGAATAAATTTATTCTGCCACAGATTAAGGGATTATAAATTATTTAAAA ATATGCTGGCAAACTCTCGC
Product: pyruvate phosphate dikinase
Products: AMP; H+; Phosphoenolpyruvate; Phosphate [C]
Alternate protein names: None
Number of amino acids: Translated: 625; Mature: 625
Protein sequence:
>625_residues MKKYIYSLFFFLIFMSLSAQRYSSSLENYEAYKAFRGKPLSDKFSNIVSVKVIYDLRKQKMYYFNSTLIPLHYDFVINYL HYNQDLEVFNNDNYSNTQKNRDFLLGNLNHIKGTDKWIFELAASDHMPVELIERFFNLVKKSTFIGENLKFYLNNPEQME WFRLEQFKIPCVKSDYIFNEIQYQEVVSGTNIGILRQYKIKDLEKVKPNPDEIVVLDGTPDILPNVRGIIVNELQTPLSH LVLLGKNRKIPIMAYTMALKDENIKKLISKKVELKIKSDTFFIKETDKKIVLKTNSKKKKLTIDNTVTDLVDLSKIPKKG VNYIGSKAQNMSYLIAISKEIPFRTPEDAHAIPFYFYTKHIQKESISPLIKELLAFPNKDSTVWINQQLKKIRDAIKKEP VDPELISKLNLAFKNAKFKNFRFRSSTNAEDLDDFNGAGLYDSKTGILGDSIKTFEKAIKQVWASVWNEASYNERELFGI DQQNIAMGVLVHRSFPDELANGVVITKNIFRQNFPGITVNVQKGENSVVKPEKGEICEQFVAYHFNSGTNDDDFDVDYTS NSNLNDNEPLLSRKEMSRLFMVSKKIEEKMYRYWRKSLFHPVDIEFKIVGENRDLYIKQVRPFND
Sequences:
>Translated_625_residues MKKYIYSLFFFLIFMSLSAQRYSSSLENYEAYKAFRGKPLSDKFSNIVSVKVIYDLRKQKMYYFNSTLIPLHYDFVINYL HYNQDLEVFNNDNYSNTQKNRDFLLGNLNHIKGTDKWIFELAASDHMPVELIERFFNLVKKSTFIGENLKFYLNNPEQME WFRLEQFKIPCVKSDYIFNEIQYQEVVSGTNIGILRQYKIKDLEKVKPNPDEIVVLDGTPDILPNVRGIIVNELQTPLSH LVLLGKNRKIPIMAYTMALKDENIKKLISKKVELKIKSDTFFIKETDKKIVLKTNSKKKKLTIDNTVTDLVDLSKIPKKG VNYIGSKAQNMSYLIAISKEIPFRTPEDAHAIPFYFYTKHIQKESISPLIKELLAFPNKDSTVWINQQLKKIRDAIKKEP VDPELISKLNLAFKNAKFKNFRFRSSTNAEDLDDFNGAGLYDSKTGILGDSIKTFEKAIKQVWASVWNEASYNERELFGI DQQNIAMGVLVHRSFPDELANGVVITKNIFRQNFPGITVNVQKGENSVVKPEKGEICEQFVAYHFNSGTNDDDFDVDYTS NSNLNDNEPLLSRKEMSRLFMVSKKIEEKMYRYWRKSLFHPVDIEFKIVGENRDLYIKQVRPFND >Mature_625_residues MKKYIYSLFFFLIFMSLSAQRYSSSLENYEAYKAFRGKPLSDKFSNIVSVKVIYDLRKQKMYYFNSTLIPLHYDFVINYL HYNQDLEVFNNDNYSNTQKNRDFLLGNLNHIKGTDKWIFELAASDHMPVELIERFFNLVKKSTFIGENLKFYLNNPEQME WFRLEQFKIPCVKSDYIFNEIQYQEVVSGTNIGILRQYKIKDLEKVKPNPDEIVVLDGTPDILPNVRGIIVNELQTPLSH LVLLGKNRKIPIMAYTMALKDENIKKLISKKVELKIKSDTFFIKETDKKIVLKTNSKKKKLTIDNTVTDLVDLSKIPKKG VNYIGSKAQNMSYLIAISKEIPFRTPEDAHAIPFYFYTKHIQKESISPLIKELLAFPNKDSTVWINQQLKKIRDAIKKEP VDPELISKLNLAFKNAKFKNFRFRSSTNAEDLDDFNGAGLYDSKTGILGDSIKTFEKAIKQVWASVWNEASYNERELFGI DQQNIAMGVLVHRSFPDELANGVVITKNIFRQNFPGITVNVQKGENSVVKPEKGEICEQFVAYHFNSGTNDDDFDVDYTS NSNLNDNEPLLSRKEMSRLFMVSKKIEEKMYRYWRKSLFHPVDIEFKIVGENRDLYIKQVRPFND
Specific function: ESSENTIAL STEP IN GLUCONEOGENESIS WHEN PYRUVATE AND LACTATE ARE USED AS A CARBON SOURCE. [C]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.9.2 [C]
Molecular weight: Translated: 72880; Mature: 72880
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYIYSLFFFLIFMSLSAQRYSSSLENYEAYKAFRGKPLSDKFSNIVSVKVIYDLRKQK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEHHHHHHHHHE MYYFNSTLIPLHYDFVINYLHYNQDLEVFNNDNYSNTQKNRDFLLGNLNHIKGTDKWIFE EEEECCEEEEEEHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEECCHHCCCCHHHHHE LAASDHMPVELIERFFNLVKKSTFIGENLKFYLNNPEQMEWFRLEQFKIPCVKSDYIFNE ECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHEEHHHEECCCCCCCHHHHH IQYQEVVSGTNIGILRQYKIKDLEKVKPNPDEIVVLDGTPDILPNVRGIIVNELQTPLSH HHHHHHHCCCCEEEEEEECHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHH LVLLGKNRKIPIMAYTMALKDENIKKLISKKVELKIKSDTFFIKETDKKIVLKTNSKKKK HEEECCCCCCEEEEEEEECCCHHHHHHHCCCEEEEEECCEEEEEECCCEEEEEECCCCCE LTIDNTVTDLVDLSKIPKKGVNYIGSKAQNMSYLIAISKEIPFRTPEDAHAIPFYFYTKH EEECCHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHH IQKESISPLIKELLAFPNKDSTVWINQQLKKIRDAIKKEPVDPELISKLNLAFKNAKFKN HHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC FRFRSSTNAEDLDDFNGAGLYDSKTGILGDSIKTFEKAIKQVWASVWNEASYNERELFGI EEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECC DQQNIAMGVLVHRSFPDELANGVVITKNIFRQNFPGITVNVQKGENSVVKPEKGEICEQF CCCCCEEEEEEECCCCHHHHCCEEEEHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHH VAYHFNSGTNDDDFDVDYTSNSNLNDNEPLLSRKEMSRLFMVSKKIEEKMYRYWRKSLFH HHHHCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PVDIEFKIVGENRDLYIKQVRPFND CCCEEEEEEECCCCEEEEECCCCCC >Mature Secondary Structure MKKYIYSLFFFLIFMSLSAQRYSSSLENYEAYKAFRGKPLSDKFSNIVSVKVIYDLRKQK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEHHHHHHHHHE MYYFNSTLIPLHYDFVINYLHYNQDLEVFNNDNYSNTQKNRDFLLGNLNHIKGTDKWIFE EEEECCEEEEEEHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEECCHHCCCCHHHHHE LAASDHMPVELIERFFNLVKKSTFIGENLKFYLNNPEQMEWFRLEQFKIPCVKSDYIFNE ECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHEEHHHEECCCCCCCHHHHH IQYQEVVSGTNIGILRQYKIKDLEKVKPNPDEIVVLDGTPDILPNVRGIIVNELQTPLSH HHHHHHHCCCCEEEEEEECHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHH LVLLGKNRKIPIMAYTMALKDENIKKLISKKVELKIKSDTFFIKETDKKIVLKTNSKKKK HEEECCCCCCEEEEEEEECCCHHHHHHHCCCEEEEEECCEEEEEECCCEEEEEECCCCCE LTIDNTVTDLVDLSKIPKKGVNYIGSKAQNMSYLIAISKEIPFRTPEDAHAIPFYFYTKH EEECCHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHH IQKESISPLIKELLAFPNKDSTVWINQQLKKIRDAIKKEPVDPELISKLNLAFKNAKFKN HHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC FRFRSSTNAEDLDDFNGAGLYDSKTGILGDSIKTFEKAIKQVWASVWNEASYNERELFGI EEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECC DQQNIAMGVLVHRSFPDELANGVVITKNIFRQNFPGITVNVQKGENSVVKPEKGEICEQF CCCCCEEEEEEECCCCHHHHCCEEEEHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHH VAYHFNSGTNDDDFDVDYTSNSNLNDNEPLLSRKEMSRLFMVSKKIEEKMYRYWRKSLFH HHHHCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PVDIEFKIVGENRDLYIKQVRPFND CCCEEEEEEECCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Mg2+; Mn2+ [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 10.5 {phosphate}} 0.083 {pyruvate}} 0.028 {ATP}} [C]
Substrates: ATP; H2O; Pyruvate [C]
Specific reaction: ATP + H2O + Pyruvate --> AMP + (2) H+ + Phosphoenolpyruvate + Phosphate [C]
General reaction: Phospho group transfer [C]
Inhibitor: 2-Oxoglutarate; 3-Phosphoglyceraldehyde; 5'-Adenylyl methylen ediphosphonate; ADP; ADP glucose; AMP; ATP; Ca2+; F-; Iodoacetate; Malate; Mg2+; Mn2+; Oxalacetate; PCMB; Phosphoenolpyruvate; Sulfhydryl reagents [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA