BacMap

Definition	Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession	NC_009441
Length	6,096,872

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The map label for this gene is dnaJ2 [H]

Identifier: 146300129

GI number: 146300129

Start: 2843383

End: 2844303

Strand: Reverse

Name: dnaJ2 [H]

Synonym: Fjoh_2374

Alternate gene names: 146300129

Gene position: 2844303-2843383 (Counterclockwise)

Preceding gene: 146300131

Following gene: 146300128

Centisome position: 46.65

GC content: 35.61

Gene sequence:

>921_bases
ATGGATTATATCGACTATTATAAAACATTAGACGTTTCAAAATCAGCAACAGAAGCCGAGATTAAAAAAGCATATCGAAA
ACTGGCCAGAAAATATCATCCCGATTTGAATCCGAATGATAAAGAAGCCGAGAAAAAATTCAAGGAAATAAACGAAGCAA
ACGAAGTTTTAAGCAATCCCGAAAATCGTAAAAAATACGATAAATACGGAAAAGACTGGAAACATGCTGACGAATTTGAA
AAAGCAGGTTACGATCCTAATCAGCAGCAATATACAAGACAACAGAGCAGCGGTCAGGATTTTTCTGGTTTTGGAGGAGG
AGATTTTTCAGGAAGTGATTTTTCAGATTTTTTTAATTCGATGTACGGTTCTTCCGGCAGAAGCAGCCGAGGCCAGTCGA
AATACAGAGGACAGGATTTTAATGCTGAATTACAATTAGATCTTGCTTCTGCTTATACAACACACAAACAAAGTTTAACC
GTAAACGGCAAAAATATCCGAATTACAATTCCTGCCGGAGTAGAAAACGGCCAGGTAATTAAAATTCCGGGTCATGGAGG
CCCCGGAGCAAACGGAGGACCTAACGGCGATTTGTATATCACTTTTATAATCGAAAACAATTCTGATTTTAAACGAGAAG
GAAACAATTTATATTCTAATGTTGATTTAGACCTTTATACAGCTGTTTTAGGAGGTGAAATCAATATCAAAACTTTTGAT
GGAAAAGTAAAAATCAAAGTTCCTGCCGAAACTCAAACCGGAACAAAAGTCAAATTAAAAGGAAAAGGTTTTCCGATTTA
CAAAAAAGACAATCAGTTTGGGGATTTATACGTAACGTACAATTTGAAAATTCCCACCCAATTATCTCAAAAAGAAAAAG
AGTTGTTTGCCGAATTATCTAAACTAAGAAATCATGAGTAA

Upstream 100 bases:

>100_bases
GTAATAAATTTCTCCTAAAATAGCCTTCACCACTTTGATAGTTAACAACTTATTATTAACTTCAATACCTCATTTTATTT
TATCTTAAATTTCAAAAAAG

Downstream 100 bases:

>100_bases
TAAAAACTTAATCCAAATAAAACAATTTTGTGTGTATCATGAAATTGAAAACACCTTTATAAAAGAACTTAACAGTTATG
GTTTAGTAGAAATTATAATT

Product: chaperone DnaJ domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MDYIDYYKTLDVSKSATEAEIKKAYRKLARKYHPDLNPNDKEAEKKFKEINEANEVLSNPENRKKYDKYGKDWKHADEFE
KAGYDPNQQQYTRQQSSGQDFSGFGGGDFSGSDFSDFFNSMYGSSGRSSRGQSKYRGQDFNAELQLDLASAYTTHKQSLT
VNGKNIRITIPAGVENGQVIKIPGHGGPGANGGPNGDLYITFIIENNSDFKREGNNLYSNVDLDLYTAVLGGEINIKTFD
GKVKIKVPAETQTGTKVKLKGKGFPIYKKDNQFGDLYVTYNLKIPTQLSQKEKELFAELSKLRNHE

Sequences:

>Translated_306_residues
MDYIDYYKTLDVSKSATEAEIKKAYRKLARKYHPDLNPNDKEAEKKFKEINEANEVLSNPENRKKYDKYGKDWKHADEFE
KAGYDPNQQQYTRQQSSGQDFSGFGGGDFSGSDFSDFFNSMYGSSGRSSRGQSKYRGQDFNAELQLDLASAYTTHKQSLT
VNGKNIRITIPAGVENGQVIKIPGHGGPGANGGPNGDLYITFIIENNSDFKREGNNLYSNVDLDLYTAVLGGEINIKTFD
GKVKIKVPAETQTGTKVKLKGKGFPIYKKDNQFGDLYVTYNLKIPTQLSQKEKELFAELSKLRNHE
>Mature_306_residues
MDYIDYYKTLDVSKSATEAEIKKAYRKLARKYHPDLNPNDKEAEKKFKEINEANEVLSNPENRKKYDKYGKDWKHADEFE
KAGYDPNQQQYTRQQSSGQDFSGFGGGDFSGSDFSDFFNSMYGSSGRSSRGQSKYRGQDFNAELQLDLASAYTTHKQSLT
VNGKNIRITIPAGVENGQVIKIPGHGGPGANGGPNGDLYITFIIENNSDFKREGNNLYSNVDLDLYTAVLGGEINIKTFD
GKVKIKVPAETQTGTKVKLKGKGFPIYKKDNQFGDLYVTYNLKIPTQLSQKEKELFAELSKLRNHE

Specific function: Does not influence ATP binding or hydrolysis nor ADP release. Exerts influence on the interaction of dnaK with substrates; in the presence of dafA, dnaJ inhibits substrate binding, and substrate already bound to dnaK is displaced by dnaJ and dafA [H]

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI7706495, Length=332, Percent_Identity=30.421686746988, Blast_Score=126, Evalue=3e-29,
Organism=Homo sapiens, GI6631085, Length=344, Percent_Identity=30.8139534883721, Blast_Score=125, Evalue=5e-29,
Organism=Homo sapiens, GI201862518, Length=347, Percent_Identity=29.6829971181556, Blast_Score=123, Evalue=2e-28,
Organism=Homo sapiens, GI201862587, Length=349, Percent_Identity=29.7994269340974, Blast_Score=123, Evalue=2e-28,
Organism=Homo sapiens, GI56549115, Length=347, Percent_Identity=29.6829971181556, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI5453690, Length=343, Percent_Identity=27.1137026239067, Blast_Score=114, Evalue=8e-26,
Organism=Homo sapiens, GI39204547, Length=318, Percent_Identity=27.3584905660377, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI5031741, Length=334, Percent_Identity=28.1437125748503, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI205360840, Length=127, Percent_Identity=40.1574803149606, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI205360838, Length=127, Percent_Identity=40.1574803149606, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI47777312, Length=69, Percent_Identity=56.5217391304348, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI27151736, Length=68, Percent_Identity=57.3529411764706, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI88501736, Length=68, Percent_Identity=57.3529411764706, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI21553335, Length=70, Percent_Identity=57.1428571428571, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI4885495, Length=67, Percent_Identity=58.2089552238806, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI17388799, Length=67, Percent_Identity=58.2089552238806, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI23503241, Length=119, Percent_Identity=43.6974789915966, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI24308127, Length=67, Percent_Identity=53.7313432835821, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI56687498, Length=66, Percent_Identity=56.0606060606061, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI45504382, Length=64, Percent_Identity=56.25, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI194328760, Length=188, Percent_Identity=34.5744680851064, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI194306642, Length=115, Percent_Identity=40, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI194306640, Length=115, Percent_Identity=40, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI194328758, Length=188, Percent_Identity=34.5744680851064, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI4504511, Length=159, Percent_Identity=33.9622641509434, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI29126218, Length=64, Percent_Identity=54.6875, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI9558755, Length=65, Percent_Identity=56.9230769230769, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI72534740, Length=145, Percent_Identity=35.8620689655172, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI22749377, Length=68, Percent_Identity=52.9411764705882, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1787235, Length=314, Percent_Identity=34.0764331210191, Blast_Score=184, Evalue=6e-48,
Organism=Escherichia coli, GI1786197, Length=371, Percent_Identity=33.1536388140162, Blast_Score=169, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI17534355, Length=336, Percent_Identity=30.952380952381, Blast_Score=118, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI212645553, Length=321, Percent_Identity=29.9065420560748, Blast_Score=117, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI17554644, Length=82, Percent_Identity=52.4390243902439, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17568643, Length=69, Percent_Identity=55.0724637681159, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17553096, Length=63, Percent_Identity=58.7301587301587, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17553098, Length=63, Percent_Identity=58.7301587301587, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17563890, Length=64, Percent_Identity=54.6875, Blast_Score=68, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI115532476, Length=66, Percent_Identity=48.4848484848485, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115532378, Length=67, Percent_Identity=47.7611940298507, Blast_Score=64, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17554900, Length=64, Percent_Identity=48.4375, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6324321, Length=349, Percent_Identity=27.7936962750716, Blast_Score=87, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6323870, Length=68, Percent_Identity=55.8823529411765, Blast_Score=84, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6323813, Length=120, Percent_Identity=45, Blast_Score=82, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6324265, Length=157, Percent_Identity=33.1210191082803, Blast_Score=79, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6322194, Length=67, Percent_Identity=52.2388059701493, Blast_Score=71, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6320888, Length=113, Percent_Identity=38.9380530973451, Blast_Score=70, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6323119, Length=69, Percent_Identity=53.6231884057971, Blast_Score=67, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6324252, Length=64, Percent_Identity=48.4375, Blast_Score=67, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6324103, Length=65, Percent_Identity=52.3076923076923, Blast_Score=63, Evalue=6e-11,
Organism=Drosophila melanogaster, GI19920464, Length=319, Percent_Identity=28.5266457680251, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI85726398, Length=350, Percent_Identity=29.1428571428571, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24658562, Length=335, Percent_Identity=30.1492537313433, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24658555, Length=335, Percent_Identity=30.1492537313433, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24654066, Length=124, Percent_Identity=45.1612903225806, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24654070, Length=124, Percent_Identity=45.1612903225806, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24654068, Length=124, Percent_Identity=45.1612903225806, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24654072, Length=124, Percent_Identity=45.1612903225806, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI161077138, Length=65, Percent_Identity=63.0769230769231, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI18858081, Length=362, Percent_Identity=24.585635359116, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI45549272, Length=67, Percent_Identity=55.2238805970149, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI45552813, Length=67, Percent_Identity=55.2238805970149, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI45552811, Length=131, Percent_Identity=36.6412213740458, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI20129487, Length=70, Percent_Identity=55.7142857142857, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24584014, Length=70, Percent_Identity=55.7142857142857, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24584630, Length=115, Percent_Identity=41.7391304347826, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI17737735, Length=64, Percent_Identity=53.125, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI17648033, Length=115, Percent_Identity=41.7391304347826, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI28574723, Length=64, Percent_Identity=53.125, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24668523, Length=64, Percent_Identity=53.125, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI21355911, Length=66, Percent_Identity=56.0606060606061, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24646562, Length=66, Percent_Identity=56.0606060606061, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24646560, Length=66, Percent_Identity=56.0606060606061, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24646558, Length=66, Percent_Identity=56.0606060606061, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24646556, Length=66, Percent_Identity=56.0606060606061, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI21357547, Length=66, Percent_Identity=56.0606060606061, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24651436, Length=65, Percent_Identity=44.6153846153846, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI21358311, Length=65, Percent_Identity=44.6153846153846, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24651439, Length=65, Percent_Identity=44.6153846153846, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C [H]

EC number: NA

Molecular weight: Translated: 34433; Mature: 34433

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYIDYYKTLDVSKSATEAEIKKAYRKLARKYHPDLNPNDKEAEKKFKEINEANEVLSNP
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC
ENRKKYDKYGKDWKHADEFEKAGYDPNQQQYTRQQSSGQDFSGFGGGDFSGSDFSDFFNS
HHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
MYGSSGRSSRGQSKYRGQDFNAELQLDLASAYTTHKQSLTVNGKNIRITIPAGVENGQVI
HCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCEEEECCCEEEEEEECCCCCCEEE
KIPGHGGPGANGGPNGDLYITFIIENNSDFKREGNNLYSNVDLDLYTAVLGGEINIKTFD
EECCCCCCCCCCCCCCCEEEEEEEECCCCHHHCCCCEEECCCCEEEEHHHCCEEEEEEEC
GKVKIKVPAETQTGTKVKLKGKGFPIYKKDNQFGDLYVTYNLKIPTQLSQKEKELFAELS
CEEEEEECCCCCCCCEEEEECCCCCEEECCCCCCEEEEEEEEECCCHHHHHHHHHHHHHH
KLRNHE
HHHCCC
>Mature Secondary Structure
MDYIDYYKTLDVSKSATEAEIKKAYRKLARKYHPDLNPNDKEAEKKFKEINEANEVLSNP
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC
ENRKKYDKYGKDWKHADEFEKAGYDPNQQQYTRQQSSGQDFSGFGGGDFSGSDFSDFFNS
HHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
MYGSSGRSSRGQSKYRGQDFNAELQLDLASAYTTHKQSLTVNGKNIRITIPAGVENGQVI
HCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCEEEECCCEEEEEEECCCCCCEEE
KIPGHGGPGANGGPNGDLYITFIIENNSDFKREGNNLYSNVDLDLYTAVLGGEINIKTFD
EECCCCCCCCCCCCCCCEEEEEEEECCCCHHHCCCCEEECCCCEEEEHHHCCEEEEEEEC
GKVKIKVPAETQTGTKVKLKGKGFPIYKKDNQFGDLYVTYNLKIPTQLSQKEKELFAELS
CEEEEEECCCCCCCCEEEEECCCCCEEECCCCCCEEEEEEEEECCCHHHHHHHHHHHHHH
KLRNHE
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9349721; 9276481; 10092456 [H]