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The map label for this gene is ynfJ [C]

Identifier: 146300126

GI number: 146300126

Start: 2841195

End: 2842451

Strand: Reverse

Name: ynfJ [C]

Synonym: Fjoh_2371

Alternate gene names: 146300126

Gene position: 2842451-2841195 (Counterclockwise)

Preceding gene: 146300127

Following gene: 146300125

Centisome position: 46.62

GC content: 37.71

Gene sequence:

>1257_bases
ATGACTTCTCAAAACACTAAACAATTCCTTCTTTCTCTTCCAAAATGGATTCTTATCTGTGCTTTAATTGGTATTTTATC
AGGATCTGCATCTGCTTTTTTTCTTGTATCTTTAGAATGGGTAACACAGTTTAGAATTCAGCACGACTGGATTATCTGGC
TTTTGCCTTTTGGCGGATTATTGGTTGGTTTGAGTTATTATTATTGGGGAGAATCGGTTGTAAAAGGCAACAATTTATTG
CTTGAAGAATACGAAAAACCCAAAAAAGTCATTCCGTTTAAAATGGCACCTTTGGTTCTTTTAGGCACTTTACTTACTCA
TTTGTTTGGAGGTTCAGCCGGACGCGAAGGTACAGCCGTACAAATGGGAGGCGCAATCGCAGATCAATTCACTAAAATTT
TTAACTTAGATAATGCAGAACGCCGAATTCTTATTATTCTGGGTATCAGCGCAGGTTTTGCCTCTGTTTTTGGAACACCC
TTAGCAGGCGCTGTTTTTGCTTTAGAAGTTTTGTACTTCAGTAAAATCAATTTTAAAAGCGCTTTACTTTCTTTTGTAGT
TGCTTATGCTGCTTATTTTACGGTAGAATTCTGGAAAATAAAACACACACATTACAGTATTCCGGTTGTTCCCGAACTTA
ATTTCGACACTATATTTTATACCATATTACTCGGACTTCTTTCAGGCTTTGCTGCGTTATTATTTTCGAGAAGCACACAT
TTCTGGGGTTCACTTTTCTCTAAAAACATCAAATATCCGCCGCTTCGTCCAGTTATTGGCGGTGTCGTTTTAGCTGTTGC
TATTGCCGGTTTAGGTTTTACTAAATTCTCCGGACTTGGTGTGCCAGTTATTGTTGACTCATTTTCAAATCCAAGTGAAT
GGTATGATTTTCTGCTCAAAATTCTATTTACAGGATTCACTTTGGGAGCAGGCTTTAAAGGCGGAGAAGTAACACCTTTA
TTCTTTGTCGGCGCCACATTAGGAAGCGCATTATCAATATTTATCCCAATGCCTATTGCGCTTTTAGCCGGAGTTGGTTT
CGTGTCTGTTTTTTCTGGTGCAACCCACACTCCTATTGCCTGCACTATTATGGGAATGGAATTATTTGGCATTCAGCCCG
GAATTTTCATTGCTCTAGGATGTACAATAGCGTATTTTTCTTCAGGTTCTGTTGGTATTTACAAATCACAAATCGTTAAA
GGTGCGAAGTATAAATTGTACCAAAGATTTCAGAAAAAAGAACTTCAAAATTTGTAA

Upstream 100 bases:

>100_bases
AGTAATTTTAGCAGCCACGAATTTTAAAAAAAATCATTTTTAATCCATTTAATCTGTGAAAAATCGTGAAATTCGTGGCT
GAAATAATTTTACTCTTTGA

Downstream 100 bases:

>100_bases
AATAAATTCCAAGTTTTGAATTTTAAATTCAAAAACTGAACTGATTACTGCGACTGTGACTGAAAACTAAAATTATTTTC
AGCATTACATTAAAAAAATG

Product: Cl- channel, voltage-gated family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MTSQNTKQFLLSLPKWILICALIGILSGSASAFFLVSLEWVTQFRIQHDWIIWLLPFGGLLVGLSYYYWGESVVKGNNLL
LEEYEKPKKVIPFKMAPLVLLGTLLTHLFGGSAGREGTAVQMGGAIADQFTKIFNLDNAERRILIILGISAGFASVFGTP
LAGAVFALEVLYFSKINFKSALLSFVVAYAAYFTVEFWKIKHTHYSIPVVPELNFDTIFYTILLGLLSGFAALLFSRSTH
FWGSLFSKNIKYPPLRPVIGGVVLAVAIAGLGFTKFSGLGVPVIVDSFSNPSEWYDFLLKILFTGFTLGAGFKGGEVTPL
FFVGATLGSALSIFIPMPIALLAGVGFVSVFSGATHTPIACTIMGMELFGIQPGIFIALGCTIAYFSSGSVGIYKSQIVK
GAKYKLYQRFQKKELQNL

Sequences:

>Translated_418_residues
MTSQNTKQFLLSLPKWILICALIGILSGSASAFFLVSLEWVTQFRIQHDWIIWLLPFGGLLVGLSYYYWGESVVKGNNLL
LEEYEKPKKVIPFKMAPLVLLGTLLTHLFGGSAGREGTAVQMGGAIADQFTKIFNLDNAERRILIILGISAGFASVFGTP
LAGAVFALEVLYFSKINFKSALLSFVVAYAAYFTVEFWKIKHTHYSIPVVPELNFDTIFYTILLGLLSGFAALLFSRSTH
FWGSLFSKNIKYPPLRPVIGGVVLAVAIAGLGFTKFSGLGVPVIVDSFSNPSEWYDFLLKILFTGFTLGAGFKGGEVTPL
FFVGATLGSALSIFIPMPIALLAGVGFVSVFSGATHTPIACTIMGMELFGIQPGIFIALGCTIAYFSSGSVGIYKSQIVK
GAKYKLYQRFQKKELQNL
>Mature_417_residues
TSQNTKQFLLSLPKWILICALIGILSGSASAFFLVSLEWVTQFRIQHDWIIWLLPFGGLLVGLSYYYWGESVVKGNNLLL
EEYEKPKKVIPFKMAPLVLLGTLLTHLFGGSAGREGTAVQMGGAIADQFTKIFNLDNAERRILIILGISAGFASVFGTPL
AGAVFALEVLYFSKINFKSALLSFVVAYAAYFTVEFWKIKHTHYSIPVVPELNFDTIFYTILLGLLSGFAALLFSRSTHF
WGSLFSKNIKYPPLRPVIGGVVLAVAIAGLGFTKFSGLGVPVIVDSFSNPSEWYDFLLKILFTGFTLGAGFKGGEVTPLF
FVGATLGSALSIFIPMPIALLAGVGFVSVFSGATHTPIACTIMGMELFGIQPGIFIALGCTIAYFSSGSVGIYKSQIVKG
AKYKLYQRFQKKELQNL

Specific function: Unknown

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chloride channel (TC 2.A.49) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014743
- InterPro:   IPR001807 [H]

Pfam domain/function: PF00654 Voltage_CLC [H]

EC number: NA

Molecular weight: Translated: 45591; Mature: 45460

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSQNTKQFLLSLPKWILICALIGILSGSASAFFLVSLEWVTQFRIQHDWIIWLLPFGGL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHCCCCEEEEEEHHHHH
LVGLSYYYWGESVVKGNNLLLEEYEKPKKVIPFKMAPLVLLGTLLTHLFGGSAGREGTAV
HHHHHHHHCCCCEECCCCEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEE
QMGGAIADQFTKIFNLDNAERRILIILGISAGFASVFGTPLAGAVFALEVLYFSKINFKS
EECCHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHCCHHH
ALLSFVVAYAAYFTVEFWKIKHTHYSIPVVPELNFDTIFYTILLGLLSGFAALLFSRSTH
HHHHHHHHHHHHHHHEEEEEEECEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH
FWGSLFSKNIKYPPLRPVIGGVVLAVAIAGLGFTKFSGLGVPVIVDSFSNPSEWYDFLLK
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEECCCCHHHHHHHHHH
ILFTGFTLGAGFKGGEVTPLFFVGATLGSALSIFIPMPIALLAGVGFVSVFSGATHTPIA
HHHHHHHHCCCCCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
CTIMGMELFGIQPGIFIALGCTIAYFSSGSVGIYKSQIVKGAKYKLYQRFQKKELQNL
EEEECHHHHCCCCCHHHEEHHHHEEECCCCCCEEHHHHHCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TSQNTKQFLLSLPKWILICALIGILSGSASAFFLVSLEWVTQFRIQHDWIIWLLPFGGL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHCCCCEEEEEEHHHHH
LVGLSYYYWGESVVKGNNLLLEEYEKPKKVIPFKMAPLVLLGTLLTHLFGGSAGREGTAV
HHHHHHHHCCCCEECCCCEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEE
QMGGAIADQFTKIFNLDNAERRILIILGISAGFASVFGTPLAGAVFALEVLYFSKINFKS
EECCHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHCCHHH
ALLSFVVAYAAYFTVEFWKIKHTHYSIPVVPELNFDTIFYTILLGLLSGFAALLFSRSTH
HHHHHHHHHHHHHHHEEEEEEECEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH
FWGSLFSKNIKYPPLRPVIGGVVLAVAIAGLGFTKFSGLGVPVIVDSFSNPSEWYDFLLK
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEECCCCHHHHHHHHHH
ILFTGFTLGAGFKGGEVTPLFFVGATLGSALSIFIPMPIALLAGVGFVSVFSGATHTPIA
HHHHHHHHCCCCCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
CTIMGMELFGIQPGIFIALGCTIAYFSSGSVGIYKSQIVKGAKYKLYQRFQKKELQNL
EEEECHHHHCCCCCHHHEEHHHHEEECCCCCCEEHHHHHCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]