Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is hisH [H]
Identifier: 145296059
GI number: 145296059
Start: 2178311
End: 2178946
Strand: Reverse
Name: hisH [H]
Synonym: cgR_1981
Alternate gene names: 145296059
Gene position: 2178946-2178311 (Counterclockwise)
Preceding gene: 145296060
Following gene: 145296058
Centisome position: 65.75
GC content: 52.83
Gene sequence:
>636_bases ATGACCAAAACTGTCGCCCTTCTCGACTACGGATCTGGAAACCTTCGTTCTGCTCAACGCGCACTAGAGCGTGCCGGTGC AGAAGTTATCGTGAGCTCCGATCCAGAAGTTTGCACCAACGCTGATGGCCTCCTAGTTCCTGGGGTGGGCGCATTTGATG CCTGCATGAAGGGTTTGAAAAACGTCTTCGGACATCGGATTATCGGACAGCGTCTTGCTGGTGGGCGTCCAGTGATGGGT ATTTGTGTGGGCATGCAGATCCTGTTTGATGAAGGCGATGAGCATGGCATTAAGTCAGCTGGTTGTGGCGAGTGGCCTGG CAAGGTGGAACGCCTCCAGGCGGAGATCCTGCCTCACATGGGGTGGAACACACTTGAAATGCCTACCAACTCACCAATGT TTGAGGGAATTTCACCTGATGAGCGTTTCTACTTCGTGCACTCCTATGGTGTGCGCAAGTGGACGTTGGAAACCGACGAT CTGACCATACCTCCAGAGGTTGTGTGGGCGAAGCACGAAAATGATCGTTTTGTGGCTGCTGTGGAAAACGGCACGCTGTG GGCTACTCAATTCCACCCAGAAAAATCAGGTGACGCAGGCGCAAAGCTACTGCGAAACTGGATCAACTACATCTAA
Upstream 100 bases:
>100_bases ATGGCAGCTTGGCCAGTGTGGTGGATATAAAACCCTTTTGGGGAGAAAGAAACTCGACTGCGGTTCTTGATCCTGAAAGC ACGTGACATAAACTATCGGC
Downstream 100 bases:
>100_bases CAGATAGGATCAATATTCATGACCTTCACTATTCTTCCTGCAGTCGATGTAGTTAACGGACAAGCAGTTCGCCTAGATCA GGGCGAGGCCGGCACTGAAA
Product: imidazole glycerol phosphate synthase subunit HisH
Products: NA
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MTKTVALLDYGSGNLRSAQRALERAGAEVIVSSDPEVCTNADGLLVPGVGAFDACMKGLKNVFGHRIIGQRLAGGRPVMG ICVGMQILFDEGDEHGIKSAGCGEWPGKVERLQAEILPHMGWNTLEMPTNSPMFEGISPDERFYFVHSYGVRKWTLETDD LTIPPEVVWAKHENDRFVAAVENGTLWATQFHPEKSGDAGAKLLRNWINYI
Sequences:
>Translated_211_residues MTKTVALLDYGSGNLRSAQRALERAGAEVIVSSDPEVCTNADGLLVPGVGAFDACMKGLKNVFGHRIIGQRLAGGRPVMG ICVGMQILFDEGDEHGIKSAGCGEWPGKVERLQAEILPHMGWNTLEMPTNSPMFEGISPDERFYFVHSYGVRKWTLETDD LTIPPEVVWAKHENDRFVAAVENGTLWATQFHPEKSGDAGAKLLRNWINYI >Mature_210_residues TKTVALLDYGSGNLRSAQRALERAGAEVIVSSDPEVCTNADGLLVPGVGAFDACMKGLKNVFGHRIIGQRLAGGRPVMGI CVGMQILFDEGDEHGIKSAGCGEWPGKVERLQAEILPHMGWNTLEMPTNSPMFEGISPDERFYFVHSYGVRKWTLETDDL TIPPEVVWAKHENDRFVAAVENGTLWATQFHPEKSGDAGAKLLRNWINYI
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=208, Percent_Identity=37.0192307692308, Blast_Score=121, Evalue=4e-29, Organism=Saccharomyces cerevisiae, GI6319725, Length=214, Percent_Identity=35.5140186915888, Blast_Score=120, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.-
Molecular weight: Translated: 23186; Mature: 23054
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTVALLDYGSGNLRSAQRALERAGAEVIVSSDPEVCTNADGLLVPGVGAFDACMKGLK CCCEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCHHCCCCCEEECCCCHHHHHHHHHH NVFGHRIIGQRLAGGRPVMGICVGMQILFDEGDEHGIKSAGCGEWPGKVERLQAEILPHM HHHHHHHHHHHHCCCCCHHHHHHCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC GWNTLEMPTNSPMFEGISPDERFYFVHSYGVRKWTLETDDLTIPPEVVWAKHENDRFVAA CCCEEECCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCEEEEECCCCEEEEE VENGTLWATQFHPEKSGDAGAKLLRNWINYI EECCEEEEEEECCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TKTVALLDYGSGNLRSAQRALERAGAEVIVSSDPEVCTNADGLLVPGVGAFDACMKGLK CCEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCHHCCCCCEEECCCCHHHHHHHHHH NVFGHRIIGQRLAGGRPVMGICVGMQILFDEGDEHGIKSAGCGEWPGKVERLQAEILPHM HHHHHHHHHHHHCCCCCHHHHHHCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC GWNTLEMPTNSPMFEGISPDERFYFVHSYGVRKWTLETDDLTIPPEVVWAKHENDRFVAA CCCEEECCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCEEEEECCCCEEEEE VENGTLWATQFHPEKSGDAGAKLLRNWINYI EECCEEEEEEECCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12948626 [H]