Definition Corynebacterium glutamicum R chromosome, complete genome.
Accession NC_009342
Length 3,314,179

Click here to switch to the map view.

The map label for this gene is 145296060

Identifier: 145296060

GI number: 145296060

Start: 2179991

End: 2181307

Strand: Reverse

Name: 145296060

Synonym: cgR_1982

Alternate gene names: NA

Gene position: 2181307-2179991 (Counterclockwise)

Preceding gene: 145296061

Following gene: 145296059

Centisome position: 65.82

GC content: 54.37

Gene sequence:

>1317_bases
TTGGACACACGGGCTTTAACACGCGCTGAAATTGAGCAACTTCCCAGCATGTGGAAAAGCCCAGGGTTTGTGGCTGTCCT
CGTGGCGGTTGCAGCAGCGTTCGGCAGTTGGTCACTTTTGCTTCCTGTGGTGCCATTGGCAGTGCTCAACAATGGGGGGT
CAAGCGCTGTCGCAGGTGCCACCACTGGCATCTTCATGGCAGCCACAGTGATCACTCAGATTTTTACTCCCGCTGCCCTG
CGGAAAATTGGCTACACCCCAGTGATGGCTTTCGCCGCATTCATGCTGGGTGTGCCAGCCATCGGCTACATCTTCAGCGT
CGAGCCAATTCCAGTGCTGGTAGTGTCCGCACTTCGAGGAATTGGGTTCGGTGCGCTCACCGTCGCAGAATCTGCCTTAG
TGGCGGAACTCGTTCCCGTGCGCTTCTTGGGCAAAGCCTCCGGCATGCTGGGCGTATTTATTGGCCTTTCCCAAATGCTT
TTCCTGCCTGCCGGGTTGGCGTTAGGTGACCAATTTGGCTACAACGTGGTCTATGTTTTAGGTGCCGTTATCGCACTAGT
TGCAGCGGTGATGTGTCTGCGTATTCCGCAGGTTAAGGCAGCTGCAAAGCAGCAACCACAGGTGAGCGAACAGGAGCGTT
CTGTTTCCACCTGGAAGTTGGTGCTGGTTCCCTCCTTGGCTGTTACCAGTTTGTCAATGACTTTTGGCGCAGTGTCTTCA
TTCCTTCCAGCTGCAGTCATTGAGTTAGATCCAGGATTAGGTGCTGCATTAGCGGGTATTATTTTATCCATTACCGGTGG
TTCTTCAATGGTGTTCCGCTACCTGTCCGGCGTTATCGCTGACCGCCGCGGTGTGCCTGGTACCACGATGATTCCTGCTC
AGATCATTGGGTTCTTAGGTGTCGTTTTAATCACCGTCACAATCTTCCAAGGCTGGTCCGTGTGGCTTTTGATTATAGGT
GCAGTGATGTTTGGTGGTGCTTTTGGCATGGTGCAAAACGAAGCGTTGCTTTCAATGTTTTTCCGGCTTCCTCGCACTAG
AGTCTCCGAAGCCTCCGCCATCTGGAATATCGCCTTTGATTCGGGAACAGGAATCGGCAGTTTCTTGTTGGGTATTGTGG
CAGCATCCCTGGCTTACAGTGGGGCATTCGCTGCCGGCGCAGCCGTGATCTTGCTGGGAATTCTCATGACTGTTGCCGAC
CGAATCGTCGGCCGCAATCGCATCACCGAATACAACAACACCCGCGCGCGTTTGCGCCAGGTGCCAGTCGCTCGGCGTGC
AGTGCAAGGGCTGCGCAACAGGCGCAAAGATCGCTAA

Upstream 100 bases:

>100_bases
TATAAATCAGAAAACAAAATCCTCATGGTTGCAGCCGGCCTCATCGCAGTGCTGGCAGTGGCTGGAGGAATTCTATGGTT
GTTGGGAGAGATGACGTAAT

Downstream 100 bases:

>100_bases
AACGCTTTTCGACGCCACCCCTTACTTGGCCCACCAACCCGCTGGCATAAACCCGCGATTTGATGAACTTATGGCGACAC
TGAACTCAGAGCCTCATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: Facilitator Transporter; Arabinose Efflux Permease Family Protein; Facilitator Superfamily Permease; Mfs Transporter; Transport Membrane Protein; MFS Transporter; Permease Of Facilitator Superfamily; Transmembrane Transporter

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MDTRALTRAEIEQLPSMWKSPGFVAVLVAVAAAFGSWSLLLPVVPLAVLNNGGSSAVAGATTGIFMAATVITQIFTPAAL
RKIGYTPVMAFAAFMLGVPAIGYIFSVEPIPVLVVSALRGIGFGALTVAESALVAELVPVRFLGKASGMLGVFIGLSQML
FLPAGLALGDQFGYNVVYVLGAVIALVAAVMCLRIPQVKAAAKQQPQVSEQERSVSTWKLVLVPSLAVTSLSMTFGAVSS
FLPAAVIELDPGLGAALAGIILSITGGSSMVFRYLSGVIADRRGVPGTTMIPAQIIGFLGVVLITVTIFQGWSVWLLIIG
AVMFGGAFGMVQNEALLSMFFRLPRTRVSEASAIWNIAFDSGTGIGSFLLGIVAASLAYSGAFAAGAAVILLGILMTVAD
RIVGRNRITEYNNTRARLRQVPVARRAVQGLRNRRKDR

Sequences:

>Translated_438_residues
MDTRALTRAEIEQLPSMWKSPGFVAVLVAVAAAFGSWSLLLPVVPLAVLNNGGSSAVAGATTGIFMAATVITQIFTPAAL
RKIGYTPVMAFAAFMLGVPAIGYIFSVEPIPVLVVSALRGIGFGALTVAESALVAELVPVRFLGKASGMLGVFIGLSQML
FLPAGLALGDQFGYNVVYVLGAVIALVAAVMCLRIPQVKAAAKQQPQVSEQERSVSTWKLVLVPSLAVTSLSMTFGAVSS
FLPAAVIELDPGLGAALAGIILSITGGSSMVFRYLSGVIADRRGVPGTTMIPAQIIGFLGVVLITVTIFQGWSVWLLIIG
AVMFGGAFGMVQNEALLSMFFRLPRTRVSEASAIWNIAFDSGTGIGSFLLGIVAASLAYSGAFAAGAAVILLGILMTVAD
RIVGRNRITEYNNTRARLRQVPVARRAVQGLRNRRKDR
>Mature_438_residues
MDTRALTRAEIEQLPSMWKSPGFVAVLVAVAAAFGSWSLLLPVVPLAVLNNGGSSAVAGATTGIFMAATVITQIFTPAAL
RKIGYTPVMAFAAFMLGVPAIGYIFSVEPIPVLVVSALRGIGFGALTVAESALVAELVPVRFLGKASGMLGVFIGLSQML
FLPAGLALGDQFGYNVVYVLGAVIALVAAVMCLRIPQVKAAAKQQPQVSEQERSVSTWKLVLVPSLAVTSLSMTFGAVSS
FLPAAVIELDPGLGAALAGIILSITGGSSMVFRYLSGVIADRRGVPGTTMIPAQIIGFLGVVLITVTIFQGWSVWLLIIG
AVMFGGAFGMVQNEALLSMFFRLPRTRVSEASAIWNIAFDSGTGIGSFLLGIVAASLAYSGAFAAGAAVILLGILMTVAD
RIVGRNRITEYNNTRARLRQVPVARRAVQGLRNRRKDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45834; Mature: 45834

Theoretical pI: Translated: 11.10; Mature: 11.10

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDTRALTRAEIEQLPSMWKSPGFVAVLVAVAAAFGSWSLLLPVVPLAVLNNGGSSAVAGA
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHH
TTGIFMAATVITQIFTPAALRKIGYTPVMAFAAFMLGVPAIGYIFSVEPIPVLVVSALRG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHEECCCHHHHHHHHHHH
IGFGALTVAESALVAELVPVRFLGKASGMLGVFIGLSQMLFLPAGLALGDQFGYNVVYVL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHH
GAVIALVAAVMCLRIPQVKAAAKQQPQVSEQERSVSTWKLVLVPSLAVTSLSMTFGAVSS
HHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHCCHHHEEEEEECHHHHHHHHHHHHHHHH
FLPAAVIELDPGLGAALAGIILSITGGSSMVFRYLSGVIADRRGVPGTTMIPAQIIGFLG
HHHHHHHEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
VVLITVTIFQGWSVWLLIIGAVMFGGAFGMVQNEALLSMFFRLPRTRVSEASAIWNIAFD
HHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEEC
SGTGIGSFLLGIVAASLAYSGAFAAGAAVILLGILMTVADRIVGRNRITEYNNTRARLRQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
VPVARRAVQGLRNRRKDR
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA