Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is hisA
Identifier: 145296058
GI number: 145296058
Start: 2177552
End: 2178292
Strand: Reverse
Name: hisA
Synonym: cgR_1980
Alternate gene names: 145296058
Gene position: 2178292-2177552 (Counterclockwise)
Preceding gene: 145296059
Following gene: 145296057
Centisome position: 65.73
GC content: 52.63
Gene sequence:
>741_bases ATGACCTTCACTATTCTTCCTGCAGTCGATGTAGTTAACGGACAAGCAGTTCGCCTAGATCAGGGCGAGGCCGGCACTGA AAAATCTTATGGCACCCCTTTGGAATCCGCACTGAAGTGGCAGGAGCAGGGTGCAAAGTGGTTGCACTTTGTGGACCTGG ACGCAGCGTTCAACCGTGGTTCCAATCATGAGATGATGGCGGAAATTGTCGGCAAGCTCGATGTTGATGTGGAGCTCACT GGCGGTATCCGTGATGATGAGTCTCTGGAGCGCGCGCTGGCAACCGGTGCACGTCGTGTAAACATTGGTACCGCTGCTCT GGAGAAGCCAGAGTGGATTGCTTCTGCGATTCAACGCTATGGCGAGAAGATTGCTGTCGATATCGCTGTGCGTTTGGAAG ATGGTGAATGGCGCACCCGTGGAAACGGTTGGGTCTCCGATGGTGGCGATCTGTGGGAAGTTCTCGAGCGTTTGGATTCC CAAGGTTGTGCACGTTTCGTGGTTACCGATGTGTCCAAGGACGGCACCTTGAGTGGTCCAAATGTTGAGCTGCTGCGTGA GGTTGCTGCAGCTACAGACGCACCTATCGTGGCATCTGGTGGAATTTCTGTTTTGGAAGATGTTTTGGAACTAGCCAAGT ACCAGGATGAGGGCATTGATTCCGTCATCATTGGCAAGGCACTTTATGAGCACAAGTTCACCCTCGAAGAGGCTTTGGCT GCAGTAGAAAAGCTCGGTTAA
Upstream 100 bases:
>100_bases GCTGTGGGCTACTCAATTCCACCCAGAAAAATCAGGTGACGCAGGCGCAAAGCTACTGCGAAACTGGATCAACTACATCT AACAGATAGGATCAATATTC
Downstream 100 bases:
>100_bases TACATGGATGCTCGTGGGATGTTGGCCATTGCGGAGGCCGTTGTAGATGATGCCGAAGCCCTCTTCATGCAGGGCTTCGG AGCTGCTCCTGCCCATATGA
Product: phosphoribosyl isomerase A
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MTFTILPAVDVVNGQAVRLDQGEAGTEKSYGTPLESALKWQEQGAKWLHFVDLDAAFNRGSNHEMMAEIVGKLDVDVELT GGIRDDESLERALATGARRVNIGTAALEKPEWIASAIQRYGEKIAVDIAVRLEDGEWRTRGNGWVSDGGDLWEVLERLDS QGCARFVVTDVSKDGTLSGPNVELLREVAAATDAPIVASGGISVLEDVLELAKYQDEGIDSVIIGKALYEHKFTLEEALA AVEKLG
Sequences:
>Translated_246_residues MTFTILPAVDVVNGQAVRLDQGEAGTEKSYGTPLESALKWQEQGAKWLHFVDLDAAFNRGSNHEMMAEIVGKLDVDVELT GGIRDDESLERALATGARRVNIGTAALEKPEWIASAIQRYGEKIAVDIAVRLEDGEWRTRGNGWVSDGGDLWEVLERLDS QGCARFVVTDVSKDGTLSGPNVELLREVAAATDAPIVASGGISVLEDVLELAKYQDEGIDSVIIGKALYEHKFTLEEALA AVEKLG >Mature_245_residues TFTILPAVDVVNGQAVRLDQGEAGTEKSYGTPLESALKWQEQGAKWLHFVDLDAAFNRGSNHEMMAEIVGKLDVDVELTG GIRDDESLERALATGARRVNIGTAALEKPEWIASAIQRYGEKIAVDIAVRLEDGEWRTRGNGWVSDGGDLWEVLERLDSQ GCARFVVTDVSKDGTLSGPNVELLREVAAATDAPIVASGGISVLEDVLELAKYQDEGIDSVIIGKALYEHKFTLEEALAA VEKLG
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=245, Percent_Identity=35.1020408163265, Blast_Score=129, Evalue=3e-31, Organism=Escherichia coli, GI1788336, Length=253, Percent_Identity=24.5059288537549, Blast_Score=75, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_CORGL (O68602)
Other databases:
- EMBL: AF051846 - EMBL: BA000036 - EMBL: BX927154 - PIR: JE0213 - RefSeq: NP_601295.1 - RefSeq: YP_226333.1 - ProteinModelPortal: O68602 - GeneID: 1020047 - GeneID: 3344802 - GenomeReviews: BA000036_GR - GenomeReviews: BX927147_GR - KEGG: cgb:cg2299 - KEGG: cgl:NCgl2015 - HOGENOM: HBG541613 - OMA: CARYVVT - PhylomeDB: O68602 - ProtClustDB: PRK14024 - BioCyc: CGLU196627:CG2299-MONOMER - BRENDA: 5.3.1.16 - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR010188 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR01919
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 26609; Mature: 26478
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: ACT_SITE 10-10
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFTILPAVDVVNGQAVRLDQGEAGTEKSYGTPLESALKWQEQGAKWLHFVDLDAAFNRG CEEEEEECEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECHHHHCCC SNHEMMAEIVGKLDVDVELTGGIRDDESLERALATGARRVNIGTAALEKPEWIASAIQRY CCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCEEECCHHHCCCHHHHHHHHHHH GEKIAVDIAVRLEDGEWRTRGNGWVSDGGDLWEVLERLDSQGCARFVVTDVSKDGTLSGP CCEEEEEEEEEEECCCEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC NVELLREVAAATDAPIVASGGISVLEDVLELAKYQDEGIDSVIIGKALYEHKFTLEEALA CHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH AVEKLG HHHHCC >Mature Secondary Structure TFTILPAVDVVNGQAVRLDQGEAGTEKSYGTPLESALKWQEQGAKWLHFVDLDAAFNRG EEEEEECEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECHHHHCCC SNHEMMAEIVGKLDVDVELTGGIRDDESLERALATGARRVNIGTAALEKPEWIASAIQRY CCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCEEECCHHHCCCHHHHHHHHHHH GEKIAVDIAVRLEDGEWRTRGNGWVSDGGDLWEVLERLDSQGCARFVVTDVSKDGTLSGP CCEEEEEEEEEEECCCEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC NVELLREVAAATDAPIVASGGISVLEDVLELAKYQDEGIDSVIIGKALYEHKFTLEEALA CHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH AVEKLG HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9647764; 12948626