Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is pyrH [H]
Identifier: 145295927
GI number: 145295927
Start: 2056944
End: 2057708
Strand: Reverse
Name: pyrH [H]
Synonym: cgR_1852
Alternate gene names: 145295927
Gene position: 2057708-2056944 (Counterclockwise)
Preceding gene: 145295928
Following gene: 145295926
Centisome position: 62.09
GC content: 53.46
Gene sequence:
>765_bases TTGGCACAACCCCTACTGAAGGAGAACACCACGGTGACCACCTCAAGTGAACAACCCCGTACAGGATACAAACGAGTGAT GTTAAAGCTCGGAGGTGAAATGTTTGGTGGTGGCAAAGTCGGCGTCGATCCTGATGTAGTTGACAATGTTGCACGTCAGA TCGCTGAAGTTGCTAAAACTGGAGCAGAGATTGCCGTTGTTATCGGTGGCGGAAACTTCTTCCGCGGAGCTGAGCTTCAG CAGCGTGGCATGGATCGCGCACGGTCCGATTACATGGGCATGCTCGGCACAGTCATGAACTGCCTCGCCTTGCAGGACTT CCTCGGTCAGCATGGCGTTGAATGCCGTGTCCAGACAGCCATCAACATGGCACAGGTTGCAGAACCATATCTGCCACTGC GTGCAGAACGCCACCTGGAAAAGGGCCGCGTTGTCATCTTCGGTGCTGGCATGGGTATGCCGTACTTTTCCACAGACACC ACTGCTGCACAGCGTGCGTTGGAAATCGGCTGTGACGTCCTGCTGATGGCTAAGGCTGTTGACGGTGTGTACAGCGATGA TCCTCGTACCAACCCAGATGCTGAGCTCTTCACCGAAATTACTCCAAAGGAAGTAATTGAGAAGGGCCTGAAGGTTGCCG ATGCAACTGCATTCAGCCTCTGCATGGACAACAAGATGCCTATCTTGGTGTTTAACCTGCTTACTGAAGGCAACATTGCT CGCGCCATCAGCGGTGAACGTATCGGTACTCTGGTCGAGTCCTGA
Upstream 100 bases:
>100_bases TCGAATCCCAGGAATAGGGGTGCCCTGAATTTGGGTCTCAGTGGCTTCTTGGTTGCTGTGATTTTTTCAAGGCGTACCCC GTGGCCGATGTTAAAAGCGG
Downstream 100 bases:
>100_bases TACATTTAGTCTTATAAACAGCGTGGCTTATCTAGGTTCGATTCTAGGATCCATCAGAATCCACGCTGTTAGAAAAACAC AGGAGTGAATAAATGATTGA
Product: uridylate kinase
Products: NA
Alternate protein names: UK; Uridine monophosphate kinase; UMP kinase; UMPK [H]
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MAQPLLKENTTVTTSSEQPRTGYKRVMLKLGGEMFGGGKVGVDPDVVDNVARQIAEVAKTGAEIAVVIGGGNFFRGAELQ QRGMDRARSDYMGMLGTVMNCLALQDFLGQHGVECRVQTAINMAQVAEPYLPLRAERHLEKGRVVIFGAGMGMPYFSTDT TAAQRALEIGCDVLLMAKAVDGVYSDDPRTNPDAELFTEITPKEVIEKGLKVADATAFSLCMDNKMPILVFNLLTEGNIA RAISGERIGTLVES
Sequences:
>Translated_254_residues MAQPLLKENTTVTTSSEQPRTGYKRVMLKLGGEMFGGGKVGVDPDVVDNVARQIAEVAKTGAEIAVVIGGGNFFRGAELQ QRGMDRARSDYMGMLGTVMNCLALQDFLGQHGVECRVQTAINMAQVAEPYLPLRAERHLEKGRVVIFGAGMGMPYFSTDT TAAQRALEIGCDVLLMAKAVDGVYSDDPRTNPDAELFTEITPKEVIEKGLKVADATAFSLCMDNKMPILVFNLLTEGNIA RAISGERIGTLVES >Mature_253_residues AQPLLKENTTVTTSSEQPRTGYKRVMLKLGGEMFGGGKVGVDPDVVDNVARQIAEVAKTGAEIAVVIGGGNFFRGAELQQ RGMDRARSDYMGMLGTVMNCLALQDFLGQHGVECRVQTAINMAQVAEPYLPLRAERHLEKGRVVIFGAGMGMPYFSTDTT AAQRALEIGCDVLLMAKAVDGVYSDDPRTNPDAELFTEITPKEVIEKGLKVADATAFSLCMDNKMPILVFNLLTEGNIAR AISGERIGTLVES
Specific function: Catalyzes the reversible phosphorylation of UMP to UDP [H]
COG id: COG0528
COG function: function code F; Uridylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UMP kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786367, Length=231, Percent_Identity=45.4545454545455, Blast_Score=202, Evalue=1e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR011817 - InterPro: IPR015963 [H]
Pfam domain/function: PF00696 AA_kinase [H]
EC number: =2.7.4.22 [H]
Molecular weight: Translated: 27379; Mature: 27248
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQPLLKENTTVTTSSEQPRTGYKRVMLKLGGEMFGGGKVGVDPDVVDNVARQIAEVAKT CCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC GAEIAVVIGGGNFFRGAELQQRGMDRARSDYMGMLGTVMNCLALQDFLGQHGVECRVQTA CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHH INMAQVAEPYLPLRAERHLEKGRVVIFGAGMGMPYFSTDTTAAQRALEIGCDVLLMAKAV HHHHHHHCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH DGVYSDDPRTNPDAELFTEITPKEVIEKGLKVADATAFSLCMDNKMPILVFNLLTEGNIA CCCCCCCCCCCCCHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCH RAISGERIGTLVES HHHCCCHHHHHHCC >Mature Secondary Structure AQPLLKENTTVTTSSEQPRTGYKRVMLKLGGEMFGGGKVGVDPDVVDNVARQIAEVAKT CCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC GAEIAVVIGGGNFFRGAELQQRGMDRARSDYMGMLGTVMNCLALQDFLGQHGVECRVQTA CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHH INMAQVAEPYLPLRAERHLEKGRVVIFGAGMGMPYFSTDTTAAQRALEIGCDVLLMAKAV HHHHHHHCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH DGVYSDDPRTNPDAELFTEITPKEVIEKGLKVADATAFSLCMDNKMPILVFNLLTEGNIA CCCCCCCCCCCCCHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCH RAISGERIGTLVES HHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12840036 [H]