Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is ygjT [C]
Identifier: 145295871
GI number: 145295871
Start: 1990821
End: 1991930
Strand: Reverse
Name: ygjT [C]
Synonym: cgR_1796
Alternate gene names: 145295871
Gene position: 1991930-1990821 (Counterclockwise)
Preceding gene: 145295872
Following gene: 145295869
Centisome position: 60.1
GC content: 53.06
Gene sequence:
>1110_bases ATGGAAGTAAACTTAGCCACATGGCTGATCACCATCGCAGTGATTGCTGGCTTCTTCATCTTCGATTTCTATTCCCACGT TCGCACCCCACACGAGCCGACCTTAAAAGAGTCCGCCTGGTGGAGCTTGTTCTATGTCGGTCTTGCCTGTGTCTTCGGCA TCTTCTTATGGTTCGTTTGGGGCGAGCCTGGTAACCCGCACCAGCACGGCATCGAGTTCTTCACGGGTTACGTCACAGAG AAGGCATTGAGCGTTGATAACCTGTTCATCTTCGCGCTGATCATGACTGCCTTTAAGATTCCGCGTAAGTACCAGCAAAA GGTACTGCTCATTGGTATCGCACTGGCACTGATCTTCCGCCTTCTGTTCATCCTCCTCGGCGCTGCAGTTATCGAAGCAT GGTCCGATGTCTTCTACATCTTCTCCATCTGGCTGATCTACACCGCTGTGAAGCTCCTGTGGGACGAAGTTCGAGACACC CCTGAGACCGACCCAAACGATATGTTCATCATTAAGGCGCTGCGCAAGGTCATTCCGGTTACTGAGGGCTACCACGGCGA CAAGCTCACTCATCGCGCCGGTGGAAAGCTGCACCTGACCCCACTGTTCGTTGCACTTGTATCCATCGGCATGGTTGACT TGATGTTCGCACTGGACTCCATCCCAGCGATCTACGGCATCACCACCGAGCCTTACATCGTGTTCACCACTAACGCATTC GCCCTGCTGGGTCTGCGCCAGATGTACTTCCTGCTTGACGGCCTGCTTGACCGCCTGGTCTACCTGCCTTATGGCCTGGG TCTTATCCTGCTGTTCATTGGTGCGAAGCTTGGTCTGCACGCATTGCACGAAAACAATCTGCCATTCATCAACGGTGGCG AAAACGTCTCCGTGCCTGAAGTTTCCACCGTATTCTCCTTGGTCTTCATCATTGGTGTCCTGACAATCACCGTCATTGCA TCTGTCATTAAGAACAAGCGCGATGAAAACCAGGGCGGTATTCCACCCAAGTGGAACGCTGCAAAGTATGAGGGCGACAA CTGGGAGACCGGTGAGGAGCCTGAAACGGGATCCGCCTCCGTTACCGATATCTCCTCAGAGAAGAAGTAA
Upstream 100 bases:
>100_bases ATTTTGTTCTTAGATGCATGTTAGATGCGTTGAGGGACAAGGGTGGGGGAGACCTCCGGTTCTTAAATTATCTAACCAAG AACCGGAGGTTCTTTTTCTC
Downstream 100 bases:
>100_bases CAGCATTACTTAAAATAAAGGGCCAGCACCGAGGAGTTTCGTTGCTGGCCCTTTAGCCATACGACGCTGGTTTAGGCAAG CGAGAAGGCGCCTGACTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MEVNLATWLITIAVIAGFFIFDFYSHVRTPHEPTLKESAWWSLFYVGLACVFGIFLWFVWGEPGNPHQHGIEFFTGYVTE KALSVDNLFIFALIMTAFKIPRKYQQKVLLIGIALALIFRLLFILLGAAVIEAWSDVFYIFSIWLIYTAVKLLWDEVRDT PETDPNDMFIIKALRKVIPVTEGYHGDKLTHRAGGKLHLTPLFVALVSIGMVDLMFALDSIPAIYGITTEPYIVFTTNAF ALLGLRQMYFLLDGLLDRLVYLPYGLGLILLFIGAKLGLHALHENNLPFINGGENVSVPEVSTVFSLVFIIGVLTITVIA SVIKNKRDENQGGIPPKWNAAKYEGDNWETGEEPETGSASVTDISSEKK
Sequences:
>Translated_369_residues MEVNLATWLITIAVIAGFFIFDFYSHVRTPHEPTLKESAWWSLFYVGLACVFGIFLWFVWGEPGNPHQHGIEFFTGYVTE KALSVDNLFIFALIMTAFKIPRKYQQKVLLIGIALALIFRLLFILLGAAVIEAWSDVFYIFSIWLIYTAVKLLWDEVRDT PETDPNDMFIIKALRKVIPVTEGYHGDKLTHRAGGKLHLTPLFVALVSIGMVDLMFALDSIPAIYGITTEPYIVFTTNAF ALLGLRQMYFLLDGLLDRLVYLPYGLGLILLFIGAKLGLHALHENNLPFINGGENVSVPEVSTVFSLVFIIGVLTITVIA SVIKNKRDENQGGIPPKWNAAKYEGDNWETGEEPETGSASVTDISSEKK >Mature_369_residues MEVNLATWLITIAVIAGFFIFDFYSHVRTPHEPTLKESAWWSLFYVGLACVFGIFLWFVWGEPGNPHQHGIEFFTGYVTE KALSVDNLFIFALIMTAFKIPRKYQQKVLLIGIALALIFRLLFILLGAAVIEAWSDVFYIFSIWLIYTAVKLLWDEVRDT PETDPNDMFIIKALRKVIPVTEGYHGDKLTHRAGGKLHLTPLFVALVSIGMVDLMFALDSIPAIYGITTEPYIVFTTNAF ALLGLRQMYFLLDGLLDRLVYLPYGLGLILLFIGAKLGLHALHENNLPFINGGENVSVPEVSTVFSLVFIIGVLTITVIA SVIKNKRDENQGGIPPKWNAAKYEGDNWETGEEPETGSASVTDISSEKK
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
Organism=Escherichia coli, GI48994922, Length=309, Percent_Identity=33.9805825242718, Blast_Score=177, Evalue=1e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022369 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 41344; Mature: 41344
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVNLATWLITIAVIAGFFIFDFYSHVRTPHEPTLKESAWWSLFYVGLACVFGIFLWFVW CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GEPGNPHQHGIEFFTGYVTEKALSVDNLFIFALIMTAFKIPRKYQQKVLLIGIALALIFR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LLFILLGAAVIEAWSDVFYIFSIWLIYTAVKLLWDEVRDTPETDPNDMFIIKALRKVIPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC TEGYHGDKLTHRAGGKLHLTPLFVALVSIGMVDLMFALDSIPAIYGITTEPYIVFTTNAF CCCCCCCCCHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCEEEEECCHH ALLGLRQMYFLLDGLLDRLVYLPYGLGLILLFIGAKLGLHALHENNLPFINGGENVSVPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCH VSTVFSLVFIIGVLTITVIASVIKNKRDENQGGIPPKWNAAKYEGDNWETGEEPETGSAS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VTDISSEKK EECCCCCCC >Mature Secondary Structure MEVNLATWLITIAVIAGFFIFDFYSHVRTPHEPTLKESAWWSLFYVGLACVFGIFLWFVW CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GEPGNPHQHGIEFFTGYVTEKALSVDNLFIFALIMTAFKIPRKYQQKVLLIGIALALIFR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LLFILLGAAVIEAWSDVFYIFSIWLIYTAVKLLWDEVRDTPETDPNDMFIIKALRKVIPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC TEGYHGDKLTHRAGGKLHLTPLFVALVSIGMVDLMFALDSIPAIYGITTEPYIVFTTNAF CCCCCCCCCHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCEEEEECCHH ALLGLRQMYFLLDGLLDRLVYLPYGLGLILLFIGAKLGLHALHENNLPFINGGENVSVPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCH VSTVFSLVFIIGVLTITVIASVIKNKRDENQGGIPPKWNAAKYEGDNWETGEEPETGSAS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VTDISSEKK EECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]