Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is hflX [H]
Identifier: 145295845
GI number: 145295845
Start: 1967718
End: 1969247
Strand: Reverse
Name: hflX [H]
Synonym: cgR_1770
Alternate gene names: 145295845
Gene position: 1969247-1967718 (Counterclockwise)
Preceding gene: 145295848
Following gene: 145295844
Centisome position: 59.42
GC content: 56.01
Gene sequence:
>1530_bases ATGGATGAAAAGAAAAACTTAAGTCATGATGAACTTCTCGCTCAGGCCTTCCGCGGTCACAAAAATACCGTGCGCCCAGG ATCTGACGAGACCTCAGGTTTTGATCTCAGTGGATTTATCCGAGCTGAAGAACCATCAACTGGTGATCTCGACCTAGAGG CCCGCGATGCCCAACGTCGCCGGGATACCGAAATCCACGCTGATGAAGCAGCAGATGGCTACGAGGTTGAGTACCGAAAG CTGCGACTTGAGCGCGTTATCTTAGTGGGCGTGTGGACCGAAGGTACCACCGCAGAAATTGACGCCAGCCTTGCGGAACT TGCAGCGTTGGCTGATACCGCCGGCGCTGAGGTTATTGAAACGCTGTACCAAAAGCGCGATAAACCAGATCCTGGAACCT ACATTGGTTCCGGCAAGGTTCGGGAATTAAAGGAGATCATCGAAGCCACTGGTGCAGATACCGTGGTGTGCGATGGTGAA CTTAGCCCTTCCCAGCTCGTGGCATTAGAGCGCGAACTTGATATCAAGGTCATTGACCGCACCATGCTGATTCTGGATAT CTTCGCCCAGCACGCTAAATCGCGCGAAGGTAAAGCCCAAGTCGCGTTGGCGCAGATGGAATACCTGATTAGCCGTGTGC GTGGTTGGGGTGGAAACCTCTCCAGGCAGGCCGGTGGTCGTGCAGGTTCTAATGGTGGTGTGGGTCTGCGTGGTCCAGGT GAAACCAAAATTGAAGCAGACCGCCGTCGTCTTCGATCGGATATGGCTCGCCTGCGCAGGGAACTTTCGGGGCTGGATAC GTCGAGAAGCATTAAAAGAGCGCAACGCGCAGCCTCCCTGGTGCCGCAGATCGCCATCGCCGGCTACACGAACGCCGGAA AATCTTCGCTGATTAACGCGATGACCGGCGCGGGTGTGCTGGTGGAGAACGCGCTGTTCGCCACGCTTGATCCAACAACC AGAAAAGCCGAGCTTGCCGACGGCCGACACGTCGTGTTCACGGACACCGTCGGCTTTGTGCGACACCTGCCGACCTCTCT GGTTGAGGCGTTCAAATCTACGCTGGAAGAAGTCGTGGAGGCGGACCTCATGCTGCACGTGGTGGATGGATCCGATCCGT TCCCGCTGAAGCAGATCGACGCTGTGAACACCGTGATTAGCGATATTGTGCGATCCACCGGTGCGGTGCCACCACCAGAG ATCATCGTGGTGAACAAAATTGACCAAGCTGATCCGCTGACGCTGGCAGAACTACGCCACGCCGTCGACGATGTGGTGTT TGTCTCCGCGCTGACAGGGGAGGGAATTAAGGAGCTGGAAGCTCGCATCGAACTATTCCTCAACTCCAGGGACGCGCACC TACTGCTGAAAATCCCGTTCACCCGTGGCGATATTGTGTCCCGCCTGCACCAGCATGGCACCGTTCTCAGTGAAGACTAC GCCGAAGACGGCACCTTGATGGATGTGCGTATCCCCACCCAATTGGCCCAAGAGCTGCAGAGTTACGTTGTAGAACCCAC CTCTACCTAA
Upstream 100 bases:
>100_bases AATAGAGCGCTCAATTTAGGTGTTTATGGTGCCTTGATCGCTCACGGCGTTGCCCGACACCTAGCCTTGACGACAGCAGA CGTGAAACAATAGACAAACA
Downstream 100 bases:
>100_bases CTGTCGATTTCCCAAGAGCCCCCTTGGGAGTCGATAATTAGTGCTCGTGACTTCAACATGGGGATGGACCGTCCACGGAG ACGGCAAAAAGATCGAACCC
Product: GTPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MDEKKNLSHDELLAQAFRGHKNTVRPGSDETSGFDLSGFIRAEEPSTGDLDLEARDAQRRRDTEIHADEAADGYEVEYRK LRLERVILVGVWTEGTTAEIDASLAELAALADTAGAEVIETLYQKRDKPDPGTYIGSGKVRELKEIIEATGADTVVCDGE LSPSQLVALERELDIKVIDRTMLILDIFAQHAKSREGKAQVALAQMEYLISRVRGWGGNLSRQAGGRAGSNGGVGLRGPG ETKIEADRRRLRSDMARLRRELSGLDTSRSIKRAQRAASLVPQIAIAGYTNAGKSSLINAMTGAGVLVENALFATLDPTT RKAELADGRHVVFTDTVGFVRHLPTSLVEAFKSTLEEVVEADLMLHVVDGSDPFPLKQIDAVNTVISDIVRSTGAVPPPE IIVVNKIDQADPLTLAELRHAVDDVVFVSALTGEGIKELEARIELFLNSRDAHLLLKIPFTRGDIVSRLHQHGTVLSEDY AEDGTLMDVRIPTQLAQELQSYVVEPTST
Sequences:
>Translated_509_residues MDEKKNLSHDELLAQAFRGHKNTVRPGSDETSGFDLSGFIRAEEPSTGDLDLEARDAQRRRDTEIHADEAADGYEVEYRK LRLERVILVGVWTEGTTAEIDASLAELAALADTAGAEVIETLYQKRDKPDPGTYIGSGKVRELKEIIEATGADTVVCDGE LSPSQLVALERELDIKVIDRTMLILDIFAQHAKSREGKAQVALAQMEYLISRVRGWGGNLSRQAGGRAGSNGGVGLRGPG ETKIEADRRRLRSDMARLRRELSGLDTSRSIKRAQRAASLVPQIAIAGYTNAGKSSLINAMTGAGVLVENALFATLDPTT RKAELADGRHVVFTDTVGFVRHLPTSLVEAFKSTLEEVVEADLMLHVVDGSDPFPLKQIDAVNTVISDIVRSTGAVPPPE IIVVNKIDQADPLTLAELRHAVDDVVFVSALTGEGIKELEARIELFLNSRDAHLLLKIPFTRGDIVSRLHQHGTVLSEDY AEDGTLMDVRIPTQLAQELQSYVVEPTST >Mature_509_residues MDEKKNLSHDELLAQAFRGHKNTVRPGSDETSGFDLSGFIRAEEPSTGDLDLEARDAQRRRDTEIHADEAADGYEVEYRK LRLERVILVGVWTEGTTAEIDASLAELAALADTAGAEVIETLYQKRDKPDPGTYIGSGKVRELKEIIEATGADTVVCDGE LSPSQLVALERELDIKVIDRTMLILDIFAQHAKSREGKAQVALAQMEYLISRVRGWGGNLSRQAGGRAGSNGGVGLRGPG ETKIEADRRRLRSDMARLRRELSGLDTSRSIKRAQRAASLVPQIAIAGYTNAGKSSLINAMTGAGVLVENALFATLDPTT RKAELADGRHVVFTDTVGFVRHLPTSLVEAFKSTLEEVVEADLMLHVVDGSDPFPLKQIDAVNTVISDIVRSTGAVPPPE IIVVNKIDQADPLTLAELRHAVDDVVFVSALTGEGIKELEARIELFLNSRDAHLLLKIPFTRGDIVSRLHQHGTVLSEDY AEDGTLMDVRIPTQLAQELQSYVVEPTST
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310133118, Length=282, Percent_Identity=33.3333333333333, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI310124269, Length=260, Percent_Identity=34.2307692307692, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI310124267, Length=260, Percent_Identity=34.2307692307692, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI310124171, Length=260, Percent_Identity=34.2307692307692, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI310124169, Length=260, Percent_Identity=34.2307692307692, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI310133116, Length=279, Percent_Identity=32.9749103942652, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI24308117, Length=173, Percent_Identity=30.635838150289, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI1790615, Length=419, Percent_Identity=41.2887828162291, Blast_Score=281, Evalue=5e-77, Organism=Caenorhabditis elegans, GI17561038, Length=283, Percent_Identity=34.2756183745583, Blast_Score=130, Evalue=1e-30, Organism=Drosophila melanogaster, GI24650079, Length=324, Percent_Identity=34.5679012345679, Blast_Score=135, Evalue=6e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 55468; Mature: 55468
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEKKNLSHDELLAQAFRGHKNTVRPGSDETSGFDLSGFIRAEEPSTGDLDLEARDAQRR CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHH RDTEIHADEAADGYEVEYRKLRLERVILVGVWTEGTTAEIDASLAELAALADTAGAEVIE HCCCCCCCCCCCCCHHHHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH TLYQKRDKPDPGTYIGSGKVRELKEIIEATGADTVVCDGELSPSQLVALERELDIKVIDR HHHHHCCCCCCCCEECCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCHHHHHH TMLILDIFAQHAKSREGKAQVALAQMEYLISRVRGWGGNLSRQAGGRAGSNGGVGLRGPG HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCC ETKIEADRRRLRSDMARLRRELSGLDTSRSIKRAQRAASLVPQIAIAGYTNAGKSSLINA CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHEECCCCCCHHHHHHH MTGAGVLVENALFATLDPTTRKAELADGRHVVFTDTVGFVRHLPTSLVEAFKSTLEEVVE HHCCCHHHHCCEEEECCCCCCCHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH ADLMLHVVDGSDPFPLKQIDAVNTVISDIVRSTGAVPPPEIIVVNKIDQADPLTLAELRH HCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHH AVDDVVFVSALTGEGIKELEARIELFLNSRDAHLLLKIPFTRGDIVSRLHQHGTVLSEDY HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHH AEDGTLMDVRIPTQLAQELQSYVVEPTST CCCCCEEEEECHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDEKKNLSHDELLAQAFRGHKNTVRPGSDETSGFDLSGFIRAEEPSTGDLDLEARDAQRR CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHH RDTEIHADEAADGYEVEYRKLRLERVILVGVWTEGTTAEIDASLAELAALADTAGAEVIE HCCCCCCCCCCCCCHHHHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH TLYQKRDKPDPGTYIGSGKVRELKEIIEATGADTVVCDGELSPSQLVALERELDIKVIDR HHHHHCCCCCCCCEECCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCHHHHHH TMLILDIFAQHAKSREGKAQVALAQMEYLISRVRGWGGNLSRQAGGRAGSNGGVGLRGPG HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCC ETKIEADRRRLRSDMARLRRELSGLDTSRSIKRAQRAASLVPQIAIAGYTNAGKSSLINA CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHEECCCCCCHHHHHHH MTGAGVLVENALFATLDPTTRKAELADGRHVVFTDTVGFVRHLPTSLVEAFKSTLEEVVE HHCCCHHHHCCEEEECCCCCCCHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH ADLMLHVVDGSDPFPLKQIDAVNTVISDIVRSTGAVPPPEIIVVNKIDQADPLTLAELRH HCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHH AVDDVVFVSALTGEGIKELEARIELFLNSRDAHLLLKIPFTRGDIVSRLHQHGTVLSEDY HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHH AEDGTLMDVRIPTQLAQELQSYVVEPTST CCCCCEEEEECHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]