Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is paaE [H]
Identifier: 145294703
GI number: 145294703
Start: 708413
End: 709567
Strand: Direct
Name: paaE [H]
Synonym: cgR_0651
Alternate gene names: 145294703
Gene position: 708413-709567 (Clockwise)
Preceding gene: 145294702
Following gene: 145294704
Centisome position: 21.38
GC content: 53.16
Gene sequence:
>1155_bases ATGACTTCTGTAATTAAGAAAAAAGCGAAATTCAACACTCTCTCAGTTTCAGGAGTTAAAAAGCTCACCGACGATTCCGT CGAGGTCAGCTTCGATGTTCCTGAAGAACTTCAGGATGATTACGATTACATCCCCGGCCAGTACGTTGCTCTACGAGCCA CCGTGGATGGGGAGGAACTCCGACGTTCCTATTCAATCTGCGATATCCCCAACAAGGGCACCATTCGCGTAGGTATTAAG AAAGACCTGGGCGGCAAGTTCTCCACTTGGGCAAATGAAGAACTCCAGCTCGGCGATGTTATCGATGTGATGAACCCCCA AGGCGCATTCACCTCCAAGATTCACGTCACCAGCCTCAATGATGCGCAAAACTTGGTTGATTCGGAATTGGGGCAGGTAG AAAACCCTAACTTTGTTGCCATTGCCGCAGGCTCGGGCATCACCCCAATCATGTCCATTGCGCAGGCCGTGCTCAAATCC TTGCCCAAGGCGACTTTCCAGCTGGTGTACTCCAACAAGGGTGGTGCAGATGTCATGTTCGCCGACAAAATCGGCGATCT GAAAGACAAATACCCGGCACGCTTTGCGGTCCACCATGTGCTCACCCGCGAACAACGCGTCAATCCGCTCTTCTCCGGGC GCATTGACGACGAAAAGATGGAGCTTCTACTCGATCAAGTGCTCCGCCCAGACCTGGTCGATGAATGGTTCCTCTGCGGA CCTTTCGAATTGGTTCAGATGTGCCGCGACTCCCTAAAAGAGCGCGACATCGATGAAAAGCGTATCCGCTTCGAGCTCTT CTCCACTGGCGATCCTAAGAGCGCACCTGGTGGCAACGCCGGACGCCCTGTTATTGCTGATCCCAAGGGCAAGAACATCT CCATCCAATTCCAACTGGATGGATTGTCCGGCACCATCGAATCCCCAGTATCCGCGAAAGAGACCGTACTCAACGCAGCA CTTCGTGCCCGCCCAGATGTACCTTTCGCGTGTGCCGGCGGAGTCTGCGGAACCTGTCGCGCAAAGGTCGTTGAAGGTGA CTACGAGATGGATGAAAACTACGCACTCGAGCCTGATGAAGTTGCAGCTGGTTACGTGCTGACCTGCCAAACCCGACCAA CTGGTGATTGCATCACTGTTGACTACGACGCGTAA
Upstream 100 bases:
>100_bases CCAACACCAAATTAATTAGCCAGTTCGGTTCAACCTCTTGCAAATCTCTTCATACCTGCAAGGACTGCTTTGAGCCTTTC GATTACTTCAAGGTGCACTA
Downstream 100 bases:
>100_bases AGGACAAGGTCAGTGATCGATCTTAATATCCACCGCATTGATGAGCACGCAAGTTATGCCGAAGTAGTGCTCAACGATCC ATCAACTCTCAACGCCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MTSVIKKKAKFNTLSVSGVKKLTDDSVEVSFDVPEELQDDYDYIPGQYVALRATVDGEELRRSYSICDIPNKGTIRVGIK KDLGGKFSTWANEELQLGDVIDVMNPQGAFTSKIHVTSLNDAQNLVDSELGQVENPNFVAIAAGSGITPIMSIAQAVLKS LPKATFQLVYSNKGGADVMFADKIGDLKDKYPARFAVHHVLTREQRVNPLFSGRIDDEKMELLLDQVLRPDLVDEWFLCG PFELVQMCRDSLKERDIDEKRIRFELFSTGDPKSAPGGNAGRPVIADPKGKNISIQFQLDGLSGTIESPVSAKETVLNAA LRARPDVPFACAGGVCGTCRAKVVEGDYEMDENYALEPDEVAAGYVLTCQTRPTGDCITVDYDA
Sequences:
>Translated_384_residues MTSVIKKKAKFNTLSVSGVKKLTDDSVEVSFDVPEELQDDYDYIPGQYVALRATVDGEELRRSYSICDIPNKGTIRVGIK KDLGGKFSTWANEELQLGDVIDVMNPQGAFTSKIHVTSLNDAQNLVDSELGQVENPNFVAIAAGSGITPIMSIAQAVLKS LPKATFQLVYSNKGGADVMFADKIGDLKDKYPARFAVHHVLTREQRVNPLFSGRIDDEKMELLLDQVLRPDLVDEWFLCG PFELVQMCRDSLKERDIDEKRIRFELFSTGDPKSAPGGNAGRPVIADPKGKNISIQFQLDGLSGTIESPVSAKETVLNAA LRARPDVPFACAGGVCGTCRAKVVEGDYEMDENYALEPDEVAAGYVLTCQTRPTGDCITVDYDA >Mature_383_residues TSVIKKKAKFNTLSVSGVKKLTDDSVEVSFDVPEELQDDYDYIPGQYVALRATVDGEELRRSYSICDIPNKGTIRVGIKK DLGGKFSTWANEELQLGDVIDVMNPQGAFTSKIHVTSLNDAQNLVDSELGQVENPNFVAIAAGSGITPIMSIAQAVLKSL PKATFQLVYSNKGGADVMFADKIGDLKDKYPARFAVHHVLTREQRVNPLFSGRIDDEKMELLLDQVLRPDLVDEWFLCGP FELVQMCRDSLKERDIDEKRIRFELFSTGDPKSAPGGNAGRPVIADPKGKNISIQFQLDGLSGTIESPVSAKETVLNAAL RARPDVPFACAGGVCGTCRAKVVEGDYEMDENYALEPDEVAAGYVLTCQTRPTGDCITVDYDA
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG1018
COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Homo sapiens, GI284448553, Length=215, Percent_Identity=26.046511627907, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI6552328, Length=215, Percent_Identity=26.046511627907, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI193794826, Length=215, Percent_Identity=26.046511627907, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI4503327, Length=215, Percent_Identity=26.046511627907, Blast_Score=66, Evalue=5e-11, Organism=Homo sapiens, GI284448551, Length=215, Percent_Identity=26.046511627907, Blast_Score=66, Evalue=5e-11, Organism=Escherichia coli, GI1787658, Length=374, Percent_Identity=38.5026737967914, Blast_Score=266, Evalue=1e-72, Organism=Escherichia coli, GI1787098, Length=362, Percent_Identity=26.7955801104972, Blast_Score=101, Evalue=9e-23, Organism=Escherichia coli, GI1788903, Length=230, Percent_Identity=24.3478260869565, Blast_Score=77, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17563928, Length=276, Percent_Identity=25, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6323552, Length=215, Percent_Identity=25.5813953488372, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR017927 - InterPro: IPR001041 - InterPro: IPR001709 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR011884 - InterPro: IPR001221 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 41997; Mature: 41866
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVIKKKAKFNTLSVSGVKKLTDDSVEVSFDVPEELQDDYDYIPGQYVALRATVDGEEL CCHHHHHHHCCCEEEECCHHHCCCCCEEEEECCCHHHHHHHCCCCCCEEEEEEECCHHHH RRSYSICDIPNKGTIRVGIKKDLGGKFSTWANEELQLGDVIDVMNPQGAFTSKIHVTSLN HHHCCEECCCCCCEEEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEEEECC DAQNLVDSELGQVENPNFVAIAAGSGITPIMSIAQAVLKSLPKATFQLVYSNKGGADVMF HHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEE ADKIGDLKDKYPARFAVHHVLTREQRVNPLFSGRIDDEKMELLLDQVLRPDLVDEWFLCG ECCCCCHHHHCCHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHCCCHHHHHHCCC PFELVQMCRDSLKERDIDEKRIRFELFSTGDPKSAPGGNAGRPVIADPKGKNISIQFQLD HHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCCCCEEEEEEEEC GLSGTIESPVSAKETVLNAALRARPDVPFACAGGVCGTCRAKVVEGDYEMDENYALEPDE CCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCHH VAAGYVLTCQTRPTGDCITVDYDA HCCCEEEEECCCCCCCEEEEECCC >Mature Secondary Structure TSVIKKKAKFNTLSVSGVKKLTDDSVEVSFDVPEELQDDYDYIPGQYVALRATVDGEEL CHHHHHHHCCCEEEECCHHHCCCCCEEEEECCCHHHHHHHCCCCCCEEEEEEECCHHHH RRSYSICDIPNKGTIRVGIKKDLGGKFSTWANEELQLGDVIDVMNPQGAFTSKIHVTSLN HHHCCEECCCCCCEEEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEEEECC DAQNLVDSELGQVENPNFVAIAAGSGITPIMSIAQAVLKSLPKATFQLVYSNKGGADVMF HHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEE ADKIGDLKDKYPARFAVHHVLTREQRVNPLFSGRIDDEKMELLLDQVLRPDLVDEWFLCG ECCCCCHHHHCCHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHCCCHHHHHHCCC PFELVQMCRDSLKERDIDEKRIRFELFSTGDPKSAPGGNAGRPVIADPKGKNISIQFQLD HHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCCCCEEEEEEEEC GLSGTIESPVSAKETVLNAALRARPDVPFACAGGVCGTCRAKVVEGDYEMDENYALEPDE CCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCHH VAAGYVLTCQTRPTGDCITVDYDA HCCCEEEEECCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FAD [C]
Metal ions: Iron-Sulfur [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748275; 9097039; 9278503; 10766858 [H]