Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is paaD [H]
Identifier: 145294702
GI number: 145294702
Start: 707877
End: 708413
Strand: Direct
Name: paaD [H]
Synonym: cgR_0650
Alternate gene names: 145294702
Gene position: 707877-708413 (Clockwise)
Preceding gene: 145294701
Following gene: 145294703
Centisome position: 21.36
GC content: 51.4
Gene sequence:
>537_bases ATGTCGATCACCACAACCAACCATCCACTTCGCCCCCAAGATACAGAGCTTGCTCGACTCTGGGACATTGCCGCTCAAGT TCCTGATCCAGAAATCCCAGTGATCTCCATTGCTGATCTTGGAATCTTGCGCGGAGTGGCTTTCGAAGGAAATACCGTGG TGGTCACCATTACTCCCACCTATTCAGGATGCCCCGCGATGGGAACCATCACAGCTGACGTTGTCGATGCCCTAAAGCGT GAAGGCTTTGAAAACACCCGCGTTGATCTTGTTCTCCACCCTGCATGGTCCACGGATTGGATGACTGAGCACGGTAAAGA AAAACTCCGCGAATACGGCATCGCGCCACCTCAGGGAATGTCACGGAGGACTTCAGGACCAATTTTGCTCAATCTTGCTC CTCCAACTCCGGTGACGTGCCCACACTGCCACTCCACCAACACCAAATTAATTAGCCAGTTCGGTTCAACCTCTTGCAAA TCTCTTCATACCTGCAAGGACTGCTTTGAGCCTTTCGATTACTTCAAGGTGCACTAA
Upstream 100 bases:
>100_bases TGGCCGAAATGCAATCACTTGCACGCCAGCATCCCGGCGCCACTTGGTAGCTGGACTTTCTCACAGAATAAATCCCAGTT AGTCCCAGAGGAGTAACACC
Downstream 100 bases:
>100_bases TGACTTCTGTAATTAAGAAAAAAGCGAAATTCAACACTCTCTCAGTTTCAGGAGTTAAAAAGCTCACCGACGATTCCGTC GAGGTCAGCTTCGATGTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MSITTTNHPLRPQDTELARLWDIAAQVPDPEIPVISIADLGILRGVAFEGNTVVVTITPTYSGCPAMGTITADVVDALKR EGFENTRVDLVLHPAWSTDWMTEHGKEKLREYGIAPPQGMSRRTSGPILLNLAPPTPVTCPHCHSTNTKLISQFGSTSCK SLHTCKDCFEPFDYFKVH
Sequences:
>Translated_178_residues MSITTTNHPLRPQDTELARLWDIAAQVPDPEIPVISIADLGILRGVAFEGNTVVVTITPTYSGCPAMGTITADVVDALKR EGFENTRVDLVLHPAWSTDWMTEHGKEKLREYGIAPPQGMSRRTSGPILLNLAPPTPVTCPHCHSTNTKLISQFGSTSCK SLHTCKDCFEPFDYFKVH >Mature_177_residues SITTTNHPLRPQDTELARLWDIAAQVPDPEIPVISIADLGILRGVAFEGNTVVVTITPTYSGCPAMGTITADVVDALKRE GFENTRVDLVLHPAWSTDWMTEHGKEKLREYGIAPPQGMSRRTSGPILLNLAPPTPVTCPHCHSTNTKLISQFGSTSCKS LHTCKDCFEPFDYFKVH
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG2151
COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510939, Length=161, Percent_Identity=47.8260869565217, Blast_Score=159, Evalue=9e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002744 - InterPro: IPR011883 [H]
Pfam domain/function: PF01883 DUF59 [H]
EC number: NA
Molecular weight: Translated: 19558; Mature: 19426
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITTTNHPLRPQDTELARLWDIAAQVPDPEIPVISIADLGILRGVAFEGNTVVVTITPT CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCHHHHHCEEECCCEEEEEEECC YSGCPAMGTITADVVDALKREGFENTRVDLVLHPAWSTDWMTEHGKEKLREYGIAPPQGM CCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCC SRRTSGPILLNLAPPTPVTCPHCHSTNTKLISQFGSTSCKSLHTCKDCFEPFDYFKVH CCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCHHHEECC >Mature Secondary Structure SITTTNHPLRPQDTELARLWDIAAQVPDPEIPVISIADLGILRGVAFEGNTVVVTITPT CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCHHHHHCEEECCCEEEEEEECC YSGCPAMGTITADVVDALKREGFENTRVDLVLHPAWSTDWMTEHGKEKLREYGIAPPQGM CCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCC SRRTSGPILLNLAPPTPVTCPHCHSTNTKLISQFGSTSCKSLHTCKDCFEPFDYFKVH CCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]