Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is menC [H]
Identifier: 145294618
GI number: 145294618
Start: 626462
End: 627478
Strand: Direct
Name: menC [H]
Synonym: cgR_0569
Alternate gene names: 145294618
Gene position: 626462-627478 (Clockwise)
Preceding gene: 145294617
Following gene: 145294619
Centisome position: 18.9
GC content: 58.41
Gene sequence:
>1017_bases ATGAGCACCCCAACTGTTGATGAGATTCTAGAGCGCGCCCACGTGGTGTCGCTGCCGATGCGTGTGAAGTTTCGTGGCGT CACCACCAGGGAGGCTTTGCTGATTGAAGGCCCTGCTGGTTGGGGAGAGTTCGCGCCCTTCCTTGAGTATGACCCGCAAG AATCGGCCAGTTGGCTAAAGTCCGGCATTGAAGCAGCGTGGGAGGGTTTTCCGGCGCCGTTGCGTGATCGCGTGGAAGTC AATGCCACCATCCCAGCTGTTCCGGTCGATCAAGTGGCAGAAGTTTTGGACCGTTTCCCAGGCTGTCGCACCATCAAAGT AAAGGTCGCGGAACCAGGCCAGACCTTGACTGATGACATCGCGCGAGTTGCCGCTGTCCGTGAGGCACGCCCCGGCGCGA TCATCCGTGTTGATGCCAATTGTGGGTGGAGTGTGGAGCAGGCGGTGGAGGCGGCTCAGGCGTTGGCGCCGTTGGATTAT TTAGAGCAGCCGTGTGCCACCGTGGAGGAACTGGCGGAAGTGCGCATGACGGTGCAGCGGCGCGGACTTTTTGTGCGCGT CGCAGCGGATGAATCGATCAGAAAATCTGATGATCCTTATCGGGTGGCGGATCTGCGTGCTGCGGATGTGGCTGTGGTGA AGGTTGCTCCTTTGGGTGGTGTGAAAAGGGTACTTGAGGTGGCGCAACATTTGCGGGCGCGCACGATGGACATCACTGTA GCAAGTGCGTTGGACACGGTTGTGGGGATGAATGCTGGGTTGGCTGCGGTGGCGGCGTTGCCGAAGTTGGATGATGACGA TCTCATTGATGTGCCACCAGCGGCGGCGGGTCTTGCGACTTCGCAGTTGTTCCTGGAGGATGTCGCGACCCCGCACGCAA TCACTGATGGGTTCATGGAAACGCGTGTAATTGCCCCGGAAATGGATCGTTTGGAAACGCTTGCTGCCAGCAAAGATAGG CGTGATTGGTGGTTTGCGCGCGTGCGTGAATCGTATCCGTACCTGGAGACAATCTAG
Upstream 100 bases:
>100_bases TGCGCACCTACGGCGCCGAATTCCCGCTGGTCCTGCTTAAAGATGGACAGGCACTGCTTATCGACGACCACGGCGTCCAC CTAATTTAGGATGGTTCCCC
Downstream 100 bases:
>100_bases ACTGTTGTGCATGTCCAGCACGCCAGCTCAAGATCTTGCCCGCGCCGTTATTGATTCCCTCGCACCACACGTCACTGACG TGGTGTTATGCCCAGGATCC
Product: O-succinylbenzoate synthase
Products: NA
Alternate protein names: OSB synthase; OSBS; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase; o-succinylbenzoic acid synthase [H]
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MSTPTVDEILERAHVVSLPMRVKFRGVTTREALLIEGPAGWGEFAPFLEYDPQESASWLKSGIEAAWEGFPAPLRDRVEV NATIPAVPVDQVAEVLDRFPGCRTIKVKVAEPGQTLTDDIARVAAVREARPGAIIRVDANCGWSVEQAVEAAQALAPLDY LEQPCATVEELAEVRMTVQRRGLFVRVAADESIRKSDDPYRVADLRAADVAVVKVAPLGGVKRVLEVAQHLRARTMDITV ASALDTVVGMNAGLAAVAALPKLDDDDLIDVPPAAAGLATSQLFLEDVATPHAITDGFMETRVIAPEMDRLETLAASKDR RDWWFARVRESYPYLETI
Sequences:
>Translated_338_residues MSTPTVDEILERAHVVSLPMRVKFRGVTTREALLIEGPAGWGEFAPFLEYDPQESASWLKSGIEAAWEGFPAPLRDRVEV NATIPAVPVDQVAEVLDRFPGCRTIKVKVAEPGQTLTDDIARVAAVREARPGAIIRVDANCGWSVEQAVEAAQALAPLDY LEQPCATVEELAEVRMTVQRRGLFVRVAADESIRKSDDPYRVADLRAADVAVVKVAPLGGVKRVLEVAQHLRARTMDITV ASALDTVVGMNAGLAAVAALPKLDDDDLIDVPPAAAGLATSQLFLEDVATPHAITDGFMETRVIAPEMDRLETLAASKDR RDWWFARVRESYPYLETI >Mature_337_residues STPTVDEILERAHVVSLPMRVKFRGVTTREALLIEGPAGWGEFAPFLEYDPQESASWLKSGIEAAWEGFPAPLRDRVEVN ATIPAVPVDQVAEVLDRFPGCRTIKVKVAEPGQTLTDDIARVAAVREARPGAIIRVDANCGWSVEQAVEAAQALAPLDYL EQPCATVEELAEVRMTVQRRGLFVRVAADESIRKSDDPYRVADLRAADVAVVKVAPLGGVKRVLEVAQHLRARTMDITVA SALDTVVGMNAGLAAVAALPKLDDDDLIDVPPAAAGLATSQLFLEDVATPHAITDGFMETRVIAPEMDRLETLAASKDRR DWWFARVRESYPYLETI
Specific function: Converts SHCHC to OSB [H]
COG id: COG4948
COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family. MenC type 1 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013342 - InterPro: IPR001354 - InterPro: IPR010196 [H]
Pfam domain/function: PF01188 MR_MLE [H]
EC number: =4.2.1.113 [H]
Molecular weight: Translated: 36845; Mature: 36714
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPTVDEILERAHVVSLPMRVKFRGVTTREALLIEGPAGWGEFAPFLEYDPQESASWLK CCCCCHHHHHHHHHHEECCEEEEEECCCEECEEEEECCCCCCCCCCCCCCCCHHHHHHHH SGIEAAWEGFPAPLRDRVEVNATIPAVPVDQVAEVLDRFPGCRTIKVKVAEPGQTLTDDI HHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHH ARVAAVREARPGAIIRVDANCGWSVEQAVEAAQALAPLDYLEQPCATVEELAEVRMTVQR HHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH RGLFVRVAADESIRKSDDPYRVADLRAADVAVVKVAPLGGVKRVLEVAQHLRARTMDITV CCEEEEEECCCHHHCCCCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH ASALDTVVGMNAGLAAVAALPKLDDDDLIDVPPAAAGLATSQLFLEDVATPHAITDGFME HHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH TRVIAPEMDRLETLAASKDRRDWWFARVRESYPYLETI HEECCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHCC >Mature Secondary Structure STPTVDEILERAHVVSLPMRVKFRGVTTREALLIEGPAGWGEFAPFLEYDPQESASWLK CCCCHHHHHHHHHHEECCEEEEEECCCEECEEEEECCCCCCCCCCCCCCCCHHHHHHHH SGIEAAWEGFPAPLRDRVEVNATIPAVPVDQVAEVLDRFPGCRTIKVKVAEPGQTLTDDI HHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHH ARVAAVREARPGAIIRVDANCGWSVEQAVEAAQALAPLDYLEQPCATVEELAEVRMTVQR HHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH RGLFVRVAADESIRKSDDPYRVADLRAADVAVVKVAPLGGVKRVLEVAQHLRARTMDITV CCEEEEEECCCHHHCCCCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH ASALDTVVGMNAGLAAVAALPKLDDDDLIDVPPAAAGLATSQLFLEDVATPHAITDGFME HHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH TRVIAPEMDRLETLAASKDRRDWWFARVRESYPYLETI HEECCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]