Definition Corynebacterium glutamicum R chromosome, complete genome.
Accession NC_009342
Length 3,314,179

Click here to switch to the map view.

The map label for this gene is 145294617

Identifier: 145294617

GI number: 145294617

Start: 625845

End: 626450

Strand: Direct

Name: 145294617

Synonym: cgR_0568

Alternate gene names: NA

Gene position: 625845-626450 (Clockwise)

Preceding gene: 145294614

Following gene: 145294618

Centisome position: 18.88

GC content: 55.61

Gene sequence:

>606_bases
ATGCGCTTACTGCTGACCTCCTTTGGCCATGATCATATTCGGGATTTTGTGCGCGGTACCGTGGCGTATATCCCTGATGC
GACCAGGCTTTTTGCTGATAGTCCCGAGGCCGCTCCTTTTATGGAGACGGAGCGAAATATGCTGCGCGAGCACGGCTTGA
GCATTCGTGAGCTGCCGATTTCCACGTCGACTCCGGAGGAAGTGGATCAGGTGCTTGGTGAGGTTGATGGGGTGTATGTG
GCGGGCGGTGAGACTTTTGATCTGATGTGGCTGCTGCGTTCCACAGGCAATGATGAGGTGTTGATTAAGCATGTTCGCGC
TGGTCTACCGTATATTGGAACGAGCGCCGGCGCGGTAATTGCAGGTCCTTCGATTGAACCGATCAGCCTTTTGGATAGCC
CCGATGTCGCGCCGAATTTAAGCGACTATTCAGGTCTAGGCCTGTGCGAGCATGTCGTGGTGCCCCATGCTGGTGGCACG
ATCCCGCAATTTCCCATCGACGTGTTTGCGGAAACCGTGCGCACCTACGGCGCCGAATTCCCGCTGGTCCTGCTTAAAGA
TGGACAGGCACTGCTTATCGACGACCACGGCGTCCACCTAATTTAG

Upstream 100 bases:

>100_bases
GGTGTTGAAATGTGCGGTGAGCTTGGCGTTGGCGGAGGACCAGTGTGGGGAGACGTCGAAAAGCGAATTCATGGCCCCAT
CTTGCCTTAAAATGGCGCAC

Downstream 100 bases:

>100_bases
GATGGTTCCCCATGAGCACCCCAACTGTTGATGAGATTCTAGAGCGCGCCCACGTGGTGTCGCTGCCGATGCGTGTGAAG
TTTCGTGGCGTCACCACCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MRLLLTSFGHDHIRDFVRGTVAYIPDATRLFADSPEAAPFMETERNMLREHGLSIRELPISTSTPEEVDQVLGEVDGVYV
AGGETFDLMWLLRSTGNDEVLIKHVRAGLPYIGTSAGAVIAGPSIEPISLLDSPDVAPNLSDYSGLGLCEHVVVPHAGGT
IPQFPIDVFAETVRTYGAEFPLVLLKDGQALLIDDHGVHLI

Sequences:

>Translated_201_residues
MRLLLTSFGHDHIRDFVRGTVAYIPDATRLFADSPEAAPFMETERNMLREHGLSIRELPISTSTPEEVDQVLGEVDGVYV
AGGETFDLMWLLRSTGNDEVLIKHVRAGLPYIGTSAGAVIAGPSIEPISLLDSPDVAPNLSDYSGLGLCEHVVVPHAGGT
IPQFPIDVFAETVRTYGAEFPLVLLKDGQALLIDDHGVHLI
>Mature_201_residues
MRLLLTSFGHDHIRDFVRGTVAYIPDATRLFADSPEAAPFMETERNMLREHGLSIRELPISTSTPEEVDQVLGEVDGVYV
AGGETFDLMWLLRSTGNDEVLIKHVRAGLPYIGTSAGAVIAGPSIEPISLLDSPDVAPNLSDYSGLGLCEHVVVPHAGGT
IPQFPIDVFAETVRTYGAEFPLVLLKDGQALLIDDHGVHLI

Specific function: Unknown

COG id: COG3340

COG function: function code E; Peptidase E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S51 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005320 [H]

Pfam domain/function: PF03575 Peptidase_S51 [H]

EC number: NA

Molecular weight: Translated: 21741; Mature: 21741

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLLTSFGHDHIRDFVRGTVAYIPDATRLFADSPEAAPFMETERNMLREHGLSIRELPI
CEEEEECCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEECCC
STSTPEEVDQVLGEVDGVYVAGGETFDLMWLLRSTGNDEVLIKHVRAGLPYIGTSAGAVI
CCCCHHHHHHHHHHCCCEEEECCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEE
AGPSIEPISLLDSPDVAPNLSDYSGLGLCEHVVVPHAGGTIPQFPIDVFAETVRTYGAEF
ECCCCCCEEECCCCCCCCCCCCCCCCCHHHHEEECCCCCCCCCCCHHHHHHHHHHCCCCC
PLVLLKDGQALLIDDHGVHLI
CEEEEECCCEEEEECCCCEEC
>Mature Secondary Structure
MRLLLTSFGHDHIRDFVRGTVAYIPDATRLFADSPEAAPFMETERNMLREHGLSIRELPI
CEEEEECCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEECCC
STSTPEEVDQVLGEVDGVYVAGGETFDLMWLLRSTGNDEVLIKHVRAGLPYIGTSAGAVI
CCCCHHHHHHHHHHCCCEEEECCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEE
AGPSIEPISLLDSPDVAPNLSDYSGLGLCEHVVVPHAGGTIPQFPIDVFAETVRTYGAEF
ECCCCCCEEECCCCCCCCCCCCCCCCCHHHHEEECCCCCCCCCCCHHHHHHHHHHCCCCC
PLVLLKDGQALLIDDHGVHLI
CEEEEECCCEEEEECCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]