Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is 145294353
Identifier: 145294353
GI number: 145294353
Start: 334938
End: 336020
Strand: Direct
Name: 145294353
Synonym: cgR_0308
Alternate gene names: NA
Gene position: 334938-336020 (Clockwise)
Preceding gene: 145294351
Following gene: 145294354
Centisome position: 10.11
GC content: 57.25
Gene sequence:
>1083_bases ATGACCATTGCTCTTGAACACCCAGTACTGCATTCCACGGCGATCGCGTTGCCTGCTCGTTTTCAGGCGAGCTATACGAC GCGTTTGGTGGCGGTGGGCGTCGATAAGCGTCCTTCTGATTTTTGGTTGGAAACAGCAGGCGCGCCGCAGGCGGGCGATG TGGTGATTGCGCGGGTGACGGCGATTAATAATCACAAGCGAGTGGAGACGCCGGAGTCGCGCAAGGCCATTTTGTTTGAG GGTGCGTTGGTGATGTTGGCGTATGGACACCGGTATGCGGCGGATCAGTTTTTAGCGCATGTGCCGGAGGATTTGGAGCC ATGCCATTTGGTGGCTGCGGGCGGTATTGCCGGGGTGGTTACTGCGCTGCATGACCAGATGGATGAACCCACAGAGATTG AACCTTTGGGATTGCTCACCAATGCGCGCGGAACGGTGAATGTGCGCGACTTTGCGGCTTTCGATAATCCTTTGAAAGTG GAGGCTCCCAAAAAGCGCGCGCAGGTGATCGCGGTATTGGGAACGTCGATGAACTCTGGAAAATCCACCACGCTTGCCTG CTTGGTCAATGGTTTGGCTGCGGCGGGGCAGAAGGTGGCGGCTGGAAAGATCACGGGCACTGGTGCTGGAAATGACCGCA TGATTTATCACGATGCTGGTGCTCACAGCGTTATTGATTTCACCGACTTTGGCTACCCAACCACGTTCAAGCTGAATTTC GCGGAGATTCGTGCGCTGAGCGTCAACATGATTAATGTGCTGGCTGATTCTGGTGCGGATACCGTGATCGTGGAAATCGC GGACGGAATTTATCAGGGCGAAACCTCGCGGCTGTTGCGCGATCAAGTGTTCCAGGAGAGCGTGGATCATGTGGTGTTCT CCGCCGTTGATGCCTTGGGCGCGAAGGCCGGTGTGCAGGAACTGCAGGCGGCGGGGCTTCATGTGGCTGCGGCCTCGGGA GTGATGACGGCTTCGCCGCTGGCCACCGCGGAAGCCGCCGCTGTGCTTGAAGTTCCAGTGGTGCCCACTTTTGATCTCAC CAACCCGGAGATCGTCACAGCGGTGCTAACGGATCATGCCTAG
Upstream 100 bases:
>100_bases AAACTCTCATGTTGGTTTCATCGTGGTTTCATGAGGCGGGATTTAACTAGAGATTGTTAGCCAATCGGCCAGACACTTCC TCCTAGAAAGGTCCCTCCTC
Downstream 100 bases:
>100_bases GTTATGGCGTGCTCGTCGCAGACTTTTGCTCATTACCCTAGGTGTACTTGGTGTGCTGCAGGCAGCTCTGGCGATCATCA TGTCGCTGAGTGTGTCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MTIALEHPVLHSTAIALPARFQASYTTRLVAVGVDKRPSDFWLETAGAPQAGDVVIARVTAINNHKRVETPESRKAILFE GALVMLAYGHRYAADQFLAHVPEDLEPCHLVAAGGIAGVVTALHDQMDEPTEIEPLGLLTNARGTVNVRDFAAFDNPLKV EAPKKRAQVIAVLGTSMNSGKSTTLACLVNGLAAAGQKVAAGKITGTGAGNDRMIYHDAGAHSVIDFTDFGYPTTFKLNF AEIRALSVNMINVLADSGADTVIVEIADGIYQGETSRLLRDQVFQESVDHVVFSAVDALGAKAGVQELQAAGLHVAAASG VMTASPLATAEAAAVLEVPVVPTFDLTNPEIVTAVLTDHA
Sequences:
>Translated_360_residues MTIALEHPVLHSTAIALPARFQASYTTRLVAVGVDKRPSDFWLETAGAPQAGDVVIARVTAINNHKRVETPESRKAILFE GALVMLAYGHRYAADQFLAHVPEDLEPCHLVAAGGIAGVVTALHDQMDEPTEIEPLGLLTNARGTVNVRDFAAFDNPLKV EAPKKRAQVIAVLGTSMNSGKSTTLACLVNGLAAAGQKVAAGKITGTGAGNDRMIYHDAGAHSVIDFTDFGYPTTFKLNF AEIRALSVNMINVLADSGADTVIVEIADGIYQGETSRLLRDQVFQESVDHVVFSAVDALGAKAGVQELQAAGLHVAAASG VMTASPLATAEAAAVLEVPVVPTFDLTNPEIVTAVLTDHA >Mature_359_residues TIALEHPVLHSTAIALPARFQASYTTRLVAVGVDKRPSDFWLETAGAPQAGDVVIARVTAINNHKRVETPESRKAILFEG ALVMLAYGHRYAADQFLAHVPEDLEPCHLVAAGGIAGVVTALHDQMDEPTEIEPLGLLTNARGTVNVRDFAAFDNPLKVE APKKRAQVIAVLGTSMNSGKSTTLACLVNGLAAAGQKVAAGKITGTGAGNDRMIYHDAGAHSVIDFTDFGYPTTFKLNFA EIRALSVNMINVLADSGADTVIVEIADGIYQGETSRLLRDQVFQESVDHVVFSAVDALGAKAGVQELQAAGLHVAAASGV MTASPLATAEAAAVLEVPVVPTFDLTNPEIVTAVLTDHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37776; Mature: 37645
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIALEHPVLHSTAIALPARFQASYTTRLVAVGVDKRPSDFWLETAGAPQAGDVVIARVT CEEEECCCCHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCEEEEEEE AINNHKRVETPESRKAILFEGALVMLAYGHRYAADQFLAHVPEDLEPCHLVAAGGIAGVV EECCCCCCCCCCCCCEEEECCEEEEEEECCHHHHHHHHHHCCCCCCCEEEEECCCHHHHH TALHDQMDEPTEIEPLGLLTNARGTVNVRDFAAFDNPLKVEAPKKRAQVIAVLGTSMNSG HHHHHHCCCCCCCCCEEEEECCCCEEEEHHHHHCCCCEEECCCHHHEEEEEEEECCCCCC KSTTLACLVNGLAAAGQKVAAGKITGTGAGNDRMIYHDAGAHSVIDFTDFGYPTTFKLNF CCHHHHHHHHHHHHCCCEEECCEEEECCCCCCEEEEECCCCCCEEEEECCCCCEEEEEEH AEIRALSVNMINVLADSGADTVIVEIADGIYQGETSRLLRDQVFQESVDHVVFSAVDALG HHEEEEEEEEEEEEECCCCCEEEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AKAGVQELQAAGLHVAAASGVMTASPLATAEAAAVLEVPVVPTFDLTNPEIVTAVLTDHA HHHHHHHHHHCCEEEEECCCCEECCCCCHHCCEEEEEECCCCEECCCCCCEEEEEEECCC >Mature Secondary Structure TIALEHPVLHSTAIALPARFQASYTTRLVAVGVDKRPSDFWLETAGAPQAGDVVIARVT EEEECCCCHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCEEEEEEE AINNHKRVETPESRKAILFEGALVMLAYGHRYAADQFLAHVPEDLEPCHLVAAGGIAGVV EECCCCCCCCCCCCCEEEECCEEEEEEECCHHHHHHHHHHCCCCCCCEEEEECCCHHHHH TALHDQMDEPTEIEPLGLLTNARGTVNVRDFAAFDNPLKVEAPKKRAQVIAVLGTSMNSG HHHHHHCCCCCCCCCEEEEECCCCEEEEHHHHHCCCCEEECCCHHHEEEEEEEECCCCCC KSTTLACLVNGLAAAGQKVAAGKITGTGAGNDRMIYHDAGAHSVIDFTDFGYPTTFKLNF CCHHHHHHHHHHHHCCCEEECCEEEECCCCCCEEEEECCCCCCEEEEECCCCCEEEEEEH AEIRALSVNMINVLADSGADTVIVEIADGIYQGETSRLLRDQVFQESVDHVVFSAVDALG HHEEEEEEEEEEEEECCCCCEEEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AKAGVQELQAAGLHVAAASGVMTASPLATAEAAAVLEVPVVPTFDLTNPEIVTAVLTDHA HHHHHHHHHHCCEEEEECCCCEECCCCCHHCCEEEEEECCCCEECCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA