Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is tgt [H]
Identifier: 145294351
GI number: 145294351
Start: 332820
End: 334085
Strand: Direct
Name: tgt [H]
Synonym: cgR_0306
Alternate gene names: 145294351
Gene position: 332820-334085 (Clockwise)
Preceding gene: 145294350
Following gene: 145294353
Centisome position: 10.04
GC content: 56.0
Gene sequence:
>1266_bases TTGGCACCTATGTCAGATCTTTCATTCACCCTCAACAACAAGCTTGCCGATGACGCCCCCGGCAAGCATGGTCGTACAGG TGTAATCCACACACCTCACGGTGATATTGCCACCCCTGCTTTCATTCCTGTGGCTACCAAAGCCACGGTGAAAACCCTTA CCCCGGAGCAGATTCGGGAGACCGGCGCACAGGCTATTTTGTCCAACGCTTACCACCTGTATCTGCAGCCTGGCCCCGAC ATCGTGGACGAGGCTGGCGGTGTGTCTGCCTTTGAGAACTGGCACGGCCCCACCTACACCGACTCCGGCGGATTCCAGGT CATGAGCCTGGGCTCCGGCTTTAAAAAGGTGCTGGCCATGGACACCACCAACTTGACGCGCAACGATATCAAGGCGGCTA AAAAAGAGCGCATGGCGCTTGTCGACGAAGACGGCGTGGATTTCAAATCTGTTATCGATGGCTCAAAGCACCGATTCACC CCAGAAGTCTCCATGCAGATTCAGCACCAATTGGGCGCAGACATCATCTTCGCTTTTGATGAACTGACCACCTTGGTTGA TACCTATGACTACCAGGTGGAATCTGTGGAACGTACCCGCAGGTGGGCACAGCGCTGCCTTCTAGAGCATGAACGTTTGA CTCAGGAACGTGTCGGAAAACCACTTCAATCCCTATGGGGAGTGGTGCAGGGGGCGCAGTTCGAGGATTTGCGTCGACAA GCAGTAAAAGGCCTGTTGGACCTGGATCGCCAGGCCGCCGACGAAGGCCGTCGTGGCTTCGGCGGTTTCGGCATCGGTGG CGCGCTCGAGAAAGAAAACTTGGGCACCATCGTGGGCTGGGTATGCGATGAGCTGCCTGATGAGAAGCCTCGTCACCTGC TGGGTATTTCCGAGCCGGACGATCTGTTCGTGGCCGTGGAAGCTGGCGCGGACACCTTCGACTGCGTGGCGCCGACCCGT TTAGGCCGACGCGGCGGTGTCTACACACTTGATGGCCGTATGAACTTGACTGGTGCGCGCTTCAAGCGTGACTTCAAGGG CATCGATGAGGAAGTCGGCGGATACGCCAGCGAGAACTACTCCCGCGCGTACATTCATCACCTGCTCAAAGCGAAGGAAT TTTTGGCCGGCACGCTGTGCACCATGCACAATCTGTACTTCATGATCACCTTGGTGGATAAGATTCGTGCCAGCATCGAT GATGGCACGTACTACGAATTCAAGGAAGAATTCTTAGGCCGCTACTACGCGTCGAAGGTTTCATAA
Upstream 100 bases:
>100_bases GGTGGATGCCTAAGTGGCTGGATCGAATTCTGCCAAGTTTGGACATTGAAGGCACCGCCCTGGAGAAGGAATGGGAGGAG AAGCAGGCTGCACGTTAGAC
Downstream 100 bases:
>100_bases CCTTCGCGGCGTTTCACCCACCTAATGACTGCGTAGGTAATGGGCATGAGGATGACCTCTAGAAGGGTTTTCCACACGAA GCCCACCACAACGTAGTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Guanine insertion enzyme; tRNA-guanine transglycosylase [H]
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MAPMSDLSFTLNNKLADDAPGKHGRTGVIHTPHGDIATPAFIPVATKATVKTLTPEQIRETGAQAILSNAYHLYLQPGPD IVDEAGGVSAFENWHGPTYTDSGGFQVMSLGSGFKKVLAMDTTNLTRNDIKAAKKERMALVDEDGVDFKSVIDGSKHRFT PEVSMQIQHQLGADIIFAFDELTTLVDTYDYQVESVERTRRWAQRCLLEHERLTQERVGKPLQSLWGVVQGAQFEDLRRQ AVKGLLDLDRQAADEGRRGFGGFGIGGALEKENLGTIVGWVCDELPDEKPRHLLGISEPDDLFVAVEAGADTFDCVAPTR LGRRGGVYTLDGRMNLTGARFKRDFKGIDEEVGGYASENYSRAYIHHLLKAKEFLAGTLCTMHNLYFMITLVDKIRASID DGTYYEFKEEFLGRYYASKVS
Sequences:
>Translated_421_residues MAPMSDLSFTLNNKLADDAPGKHGRTGVIHTPHGDIATPAFIPVATKATVKTLTPEQIRETGAQAILSNAYHLYLQPGPD IVDEAGGVSAFENWHGPTYTDSGGFQVMSLGSGFKKVLAMDTTNLTRNDIKAAKKERMALVDEDGVDFKSVIDGSKHRFT PEVSMQIQHQLGADIIFAFDELTTLVDTYDYQVESVERTRRWAQRCLLEHERLTQERVGKPLQSLWGVVQGAQFEDLRRQ AVKGLLDLDRQAADEGRRGFGGFGIGGALEKENLGTIVGWVCDELPDEKPRHLLGISEPDDLFVAVEAGADTFDCVAPTR LGRRGGVYTLDGRMNLTGARFKRDFKGIDEEVGGYASENYSRAYIHHLLKAKEFLAGTLCTMHNLYFMITLVDKIRASID DGTYYEFKEEFLGRYYASKVS >Mature_420_residues APMSDLSFTLNNKLADDAPGKHGRTGVIHTPHGDIATPAFIPVATKATVKTLTPEQIRETGAQAILSNAYHLYLQPGPDI VDEAGGVSAFENWHGPTYTDSGGFQVMSLGSGFKKVLAMDTTNLTRNDIKAAKKERMALVDEDGVDFKSVIDGSKHRFTP EVSMQIQHQLGADIIFAFDELTTLVDTYDYQVESVERTRRWAQRCLLEHERLTQERVGKPLQSLWGVVQGAQFEDLRRQA VKGLLDLDRQAADEGRRGFGGFGIGGALEKENLGTIVGWVCDELPDEKPRHLLGISEPDDLFVAVEAGADTFDCVAPTRL GRRGGVYTLDGRMNLTGARFKRDFKGIDEEVGGYASENYSRAYIHHLLKAKEFLAGTLCTMHNLYFMITLVDKIRASIDD GTYYEFKEEFLGRYYASKVS
Specific function: Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hyper
COG id: COG0343
COG function: function code J; Queuine/archaeosine tRNA-ribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queuine tRNA-ribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI13654276, Length=403, Percent_Identity=33.4987593052109, Blast_Score=238, Evalue=6e-63, Organism=Escherichia coli, GI1786607, Length=404, Percent_Identity=37.3762376237624, Blast_Score=269, Evalue=2e-73, Organism=Caenorhabditis elegans, GI17544680, Length=394, Percent_Identity=32.994923857868, Blast_Score=227, Evalue=8e-60, Organism=Drosophila melanogaster, GI19920510, Length=409, Percent_Identity=32.2738386308068, Blast_Score=234, Evalue=1e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004803 - InterPro: IPR002616 [H]
Pfam domain/function: PF01702 TGT [H]
EC number: =2.4.2.29 [H]
Molecular weight: Translated: 46667; Mature: 46536
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPMSDLSFTLNNKLADDAPGKHGRTGVIHTPHGDIATPAFIPVATKATVKTLTPEQIRE CCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEECCHHHCCCCHHHHHH TGAQAILSNAYHLYLQPGPDIVDEAGGVSAFENWHGPTYTDSGGFQVMSLGSGFKKVLAM HHHHHHHCCCEEEEECCCCCHHHCCCCCCHHHCCCCCCCCCCCCEEEEECCCCHHHHHHH DTTNLTRNDIKAAKKERMALVDEDGVDFKSVIDGSKHRFTPEVSMQIQHQLGADIIFAFD CCCCCCHHHHHHHHHHHHEEECCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEHHH ELTTLVDTYDYQVESVERTRRWAQRCLLEHERLTQERVGKPLQSLWGVVQGAQFEDLRRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHH AVKGLLDLDRQAADEGRRGFGGFGIGGALEKENLGTIVGWVCDELPDEKPRHLLGISEPD HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEECCCCCC DLFVAVEAGADTFDCVAPTRLGRRGGVYTLDGRMNLTGARFKRDFKGIDEEVGGYASENY CEEEEEECCCCCCHHCCCHHCCCCCCEEEECCCCCCCHHHHHHHHCCCHHHHCCCCCCCC SRAYIHHLLKAKEFLAGTLCTMHNLYFMITLVDKIRASIDDGTYYEFKEEFLGRYYASKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC S C >Mature Secondary Structure APMSDLSFTLNNKLADDAPGKHGRTGVIHTPHGDIATPAFIPVATKATVKTLTPEQIRE CCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEECCHHHCCCCHHHHHH TGAQAILSNAYHLYLQPGPDIVDEAGGVSAFENWHGPTYTDSGGFQVMSLGSGFKKVLAM HHHHHHHCCCEEEEECCCCCHHHCCCCCCHHHCCCCCCCCCCCCEEEEECCCCHHHHHHH DTTNLTRNDIKAAKKERMALVDEDGVDFKSVIDGSKHRFTPEVSMQIQHQLGADIIFAFD CCCCCCHHHHHHHHHHHHEEECCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEHHH ELTTLVDTYDYQVESVERTRRWAQRCLLEHERLTQERVGKPLQSLWGVVQGAQFEDLRRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHH AVKGLLDLDRQAADEGRRGFGGFGIGGALEKENLGTIVGWVCDELPDEKPRHLLGISEPD HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEECCCCCC DLFVAVEAGADTFDCVAPTRLGRRGGVYTLDGRMNLTGARFKRDFKGIDEEVGGYASENY CEEEEEECCCCCCHHCCCHHCCCCCCEEEECCCCCCCHHHHHHHHCCCHHHHCCCCCCCC SRAYIHHLLKAKEFLAGTLCTMHNLYFMITLVDKIRASIDDGTYYEFKEEFLGRYYASKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA