Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is 145294354
Identifier: 145294354
GI number: 145294354
Start: 336013
End: 337452
Strand: Direct
Name: 145294354
Synonym: cgR_0309
Alternate gene names: NA
Gene position: 336013-337452 (Clockwise)
Preceding gene: 145294353
Following gene: 145294355
Centisome position: 10.14
GC content: 53.82
Gene sequence:
>1440_bases ATGCCTAGGTTATGGCGTGCTCGTCGCAGACTTTTGCTCATTACCCTAGGTGTACTTGGTGTGCTGCAGGCAGCTCTGGC GATCATCATGTCGCTGAGTGTGTCGGCGGTGTTGTCTGGTGATCGTGGGCTAATTGCGTTGCTGCTGGCCACCACGCTGG GGTTAGGCGCAGCGCAGTGGATCCAAAAAGTAGTGGCGGAAGATCTAGGGCAACACTATGTTCATGAAGTCCGGCGGGAA TTGGTGGGTGCTGCGCTGGTGCCGGGGAATGCTAATTCTCTGGGCGTGACTGTGACTAGGGCAAGCAATGATCTTACTGC GGTGCGTAATTGGGTGACGTTGGGCATTGTTTCGCTTGCCACCGGTGTGCCTTTGATCGCGATTGTGCTGGCAGCATTGT TTGTTCACGATATTCGCACGGGAATAGCGGTGGCTGTGCCACTGCTCATGTGTGTAGCCGTGCTGCCGGTGGTGGCGCGG TGGACTTTGAAAAGAGCACGTGAACTACGCAAAAAACGTGGACGCATGGCTGCGCGGATCGCAGATTCTGTCATGGCTGG AGAATTACTGCACGCAACAGGAGCAATAGACCGTGAGCTCAATGCAGTCACCCGAGATTCCGACCGAGTGGTGATAGCTG CTGTAAGACGTTCCTGGGCCACCGGTTTTAGCCGCGCATTGATGGCCATGGCAGCCTCGCTTGGCACTGTCAGCATTGTG ATTTCTGGCCACCTGGAAGTAAGTGAGGTTGCGGGAATAATGATGCTTCTTGGCGTTCTTGCCACTCCAGTTGCAGAACT TGGCCGCGTGGTGGAATATCGCCAAAATTATAAAGCCGCGACACGCATCCTGATTCCACTTCTGCAACGAGGCTCAGAAT TTAAACGCTCCCAACAAAAACTACCCGGGTTGCAAGCAACAGAAGGAATCCCCGGTGTCTATGTCAAAGGTATTTCCGCC CTTCCTGGAGAACGGATCTACCTCCACGGCTCTGCAGATGCGACGAGAAAATGGGTCACCTCGTTGTCTGCAATGGAGGA AGGTACAGATGCAATAGTCAACGGTCAAAGGCTTTCGCAGCTTCCTTTGAAACAACGACGCGCCCTCATCGGAATCGCCT CAGCACACCACCACTTAAGCCGTGGTTCAGTATCGCGCCTGGTTGGTTTGCGAGTGCCGGATGCCACCGTGGAAGAAATA GAGCAAGCACTGGAACAAGTTGGTCTGAACAACACCGGGAAACAACGCTTGAAAAACGGCGGACACCCCTGGAGTACTTC GCAGATCAACAAACTGAAAATTGCCAGCGCCACCCTTCGAACCCCACCGCTTTTGGTACTTGAAGGCATCACCCCTGAAA ACCTCCTCAACTATCCCGGAGTGATCATCTCCACCGTTCAGGAGAACCCATCCGAAACATGGCGACAAGTGAACATCTAA
Upstream 100 bases:
>100_bases CCGCTGGCCACCGCGGAAGCCGCCGCTGTGCTTGAAGTTCCAGTGGTGCCCACTTTTGATCTCACCAACCCGGAGATCGT CACAGCGGTGCTAACGGATC
Downstream 100 bases:
>100_bases TCTAGAAACATGGCAGGACGATACGCACCATCACCAAGCGGTGACCTTCACTTCGGCAACCTCCGCACAGCGCTTCTGGC CTGGCTGTTCGCGCGCTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Multidrug ABC Transporter ATPase/Permease
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MPRLWRARRRLLLITLGVLGVLQAALAIIMSLSVSAVLSGDRGLIALLLATTLGLGAAQWIQKVVAEDLGQHYVHEVRRE LVGAALVPGNANSLGVTVTRASNDLTAVRNWVTLGIVSLATGVPLIAIVLAALFVHDIRTGIAVAVPLLMCVAVLPVVAR WTLKRARELRKKRGRMAARIADSVMAGELLHATGAIDRELNAVTRDSDRVVIAAVRRSWATGFSRALMAMAASLGTVSIV ISGHLEVSEVAGIMMLLGVLATPVAELGRVVEYRQNYKAATRILIPLLQRGSEFKRSQQKLPGLQATEGIPGVYVKGISA LPGERIYLHGSADATRKWVTSLSAMEEGTDAIVNGQRLSQLPLKQRRALIGIASAHHHLSRGSVSRLVGLRVPDATVEEI EQALEQVGLNNTGKQRLKNGGHPWSTSQINKLKIASATLRTPPLLVLEGITPENLLNYPGVIISTVQENPSETWRQVNI
Sequences:
>Translated_479_residues MPRLWRARRRLLLITLGVLGVLQAALAIIMSLSVSAVLSGDRGLIALLLATTLGLGAAQWIQKVVAEDLGQHYVHEVRRE LVGAALVPGNANSLGVTVTRASNDLTAVRNWVTLGIVSLATGVPLIAIVLAALFVHDIRTGIAVAVPLLMCVAVLPVVAR WTLKRARELRKKRGRMAARIADSVMAGELLHATGAIDRELNAVTRDSDRVVIAAVRRSWATGFSRALMAMAASLGTVSIV ISGHLEVSEVAGIMMLLGVLATPVAELGRVVEYRQNYKAATRILIPLLQRGSEFKRSQQKLPGLQATEGIPGVYVKGISA LPGERIYLHGSADATRKWVTSLSAMEEGTDAIVNGQRLSQLPLKQRRALIGIASAHHHLSRGSVSRLVGLRVPDATVEEI EQALEQVGLNNTGKQRLKNGGHPWSTSQINKLKIASATLRTPPLLVLEGITPENLLNYPGVIISTVQENPSETWRQVNI >Mature_478_residues PRLWRARRRLLLITLGVLGVLQAALAIIMSLSVSAVLSGDRGLIALLLATTLGLGAAQWIQKVVAEDLGQHYVHEVRREL VGAALVPGNANSLGVTVTRASNDLTAVRNWVTLGIVSLATGVPLIAIVLAALFVHDIRTGIAVAVPLLMCVAVLPVVARW TLKRARELRKKRGRMAARIADSVMAGELLHATGAIDRELNAVTRDSDRVVIAAVRRSWATGFSRALMAMAASLGTVSIVI SGHLEVSEVAGIMMLLGVLATPVAELGRVVEYRQNYKAATRILIPLLQRGSEFKRSQQKLPGLQATEGIPGVYVKGISAL PGERIYLHGSADATRKWVTSLSAMEEGTDAIVNGQRLSQLPLKQRRALIGIASAHHHLSRGSVSRLVGLRVPDATVEEIE QALEQVGLNNTGKQRLKNGGHPWSTSQINKLKIASATLRTPPLLVLEGITPENLLNYPGVIISTVQENPSETWRQVNI
Specific function: Unknown
COG id: COG1132
COG function: function code V; ABC-type multidrug transport system, ATPase and permease components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51485; Mature: 51354
Theoretical pI: Translated: 11.24; Mature: 11.24
Prosite motif: PS50929 ABC_TM1F
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLWRARRRLLLITLGVLGVLQAALAIIMSLSVSAVLSGDRGLIALLLATTLGLGAAQW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH IQKVVAEDLGQHYVHEVRRELVGAALVPGNANSLGVTVTRASNDLTAVRNWVTLGIVSLA HHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH TGVPLIAIVLAALFVHDIRTGIAVAVPLLMCVAVLPVVARWTLKRARELRKKRGRMAARI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADSVMAGELLHATGAIDRELNAVTRDSDRVVIAAVRRSWATGFSRALMAMAASLGTVSIV HHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEE ISGHLEVSEVAGIMMLLGVLATPVAELGRVVEYRQNYKAATRILIPLLQRGSEFKRSQQK EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LPGLQATEGIPGVYVKGISALPGERIYLHGSADATRKWVTSLSAMEEGTDAIVNGQRLSQ CCCCCCCCCCCCHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHCCCHHHHH LPLKQRRALIGIASAHHHLSRGSVSRLVGLRVPDATVEEIEQALEQVGLNNTGKQRLKNG CCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCC GHPWSTSQINKLKIASATLRTPPLLVLEGITPENLLNYPGVIISTVQENPSETWRQVNI CCCCCCCCCCCEEEEHHHCCCCCEEEEECCCHHHHHCCCCCEEEECCCCHHHHHHCCCC >Mature Secondary Structure PRLWRARRRLLLITLGVLGVLQAALAIIMSLSVSAVLSGDRGLIALLLATTLGLGAAQW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH IQKVVAEDLGQHYVHEVRRELVGAALVPGNANSLGVTVTRASNDLTAVRNWVTLGIVSLA HHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH TGVPLIAIVLAALFVHDIRTGIAVAVPLLMCVAVLPVVARWTLKRARELRKKRGRMAARI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADSVMAGELLHATGAIDRELNAVTRDSDRVVIAAVRRSWATGFSRALMAMAASLGTVSIV HHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEE ISGHLEVSEVAGIMMLLGVLATPVAELGRVVEYRQNYKAATRILIPLLQRGSEFKRSQQK EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LPGLQATEGIPGVYVKGISALPGERIYLHGSADATRKWVTSLSAMEEGTDAIVNGQRLSQ CCCCCCCCCCCCHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHCCCHHHHH LPLKQRRALIGIASAHHHLSRGSVSRLVGLRVPDATVEEIEQALEQVGLNNTGKQRLKNG CCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCC GHPWSTSQINKLKIASATLRTPPLLVLEGITPENLLNYPGVIISTVQENPSETWRQVNI CCCCCCCCCCCEEEEHHHCCCCCEEEEECCCHHHHHCCCCCEEEECCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA