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The map label for this gene is qoxA [H]

Identifier: 138897020

GI number: 138897020

Start: 3498262

End: 3499170

Strand: Reverse

Name: qoxA [H]

Synonym: GTNG_3391

Alternate gene names: 138897020

Gene position: 3499170-3498262 (Counterclockwise)

Preceding gene: 138897021

Following gene: 138897019

Centisome position: 98.56

GC content: 49.06

Gene sequence:

>909_bases
ATGAAACGGGCGATATGGCGCGCGCTGTCGGTCTTGCCGCTCCTCTTTTTGCTTAGTGGTTGCGTCGAGCGTACAGCAGT
GCTCAACCCACAAGGACCGGTGGCGCGAACGCAGTACGACTTAATTATGTGGTCAATCGGCTTTATGCTGTTGATTATTG
TCGTTGTCTTTACTTTATTTACGGTCGTGCTCATTCGTTATCGGGAGAAGCCGGAGAACGCCGATTACGAGCCGCCGGAT
GAAGAAGGAAACACGCTGCTTGAAATCGTCTGGACAGCGATTCCCGTTTTGATTGTTGCGGCGCTTGCTGTTCCGACGGT
GAAGGCGACGTTTGCCTTTGAGAAGCCGCCGACCGATAAAGTCAAACCAATAACGATTCATGTTACGGCAGCCAATTGGA
AATGGATTTTCAGTTATCCGGAAGAGAACATTGAAACGGTCAACTATGTCCATATTCCAGCGGGTGTTCCGGTCAGGTTT
AAGCTGACTTCAGTCGGACCGATGAACTCATTTTGGGTGCCAGAGTTAGGCGGACAAAAATACGCCATGGACGGCATGGA
GACAGAGCTGATTTTACAAGCTGACAAACCGGGGTCATATATGGGGCGAAGCGCCAACTTTTCCGGGGAAAAGTTCACCC
ATATGGAGTTTGAAGTCGTCGCGCAAAAAGGAGACGACTTTAAGCAATGGGTCAACGAAGTGAAACAAACGGCGCCGAAG
CTCAATGAGAACAAGTATGCAAAAATTTTAGAACCGGGACTTGTCGGGCGGATGACGTTCTCAAATACGCATTTAGAATG
GATTGACCATGCGAAACAAAACAGCCATCATGTCGAGAGGAAATCAGCAGGTAACCATGGCAACCCAGACCATGACATGG
CGAAAGACAGTCATCATCACGGAGAATAA

Upstream 100 bases:

>100_bases
AGTTTCAAATATTTTTAACTTTGATATGGTAGAAACTAAGACAATATGCATAGAAGGCACGCCTCACATGGTGGGGGCGG
ACGAAGGAGGATATACAGTG

Downstream 100 bases:

>100_bases
GAAGGGGGGAACGGGCGATGAAATGGAGCGAGTTTTTCGTCACGGGTGAGCCGTTGATTTATGCGGCTGATGTCGCGATC
GTCTTAACGATGGTCGGCAT

Product: quinol oxidase subunit II

Products: Ubiquinone-8; H2O. [C]

Alternate protein names: Cytochrome aa(3) subunit 2; Quinol oxidase polypeptide II [H]

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MKRAIWRALSVLPLLFLLSGCVERTAVLNPQGPVARTQYDLIMWSIGFMLLIIVVVFTLFTVVLIRYREKPENADYEPPD
EEGNTLLEIVWTAIPVLIVAALAVPTVKATFAFEKPPTDKVKPITIHVTAANWKWIFSYPEENIETVNYVHIPAGVPVRF
KLTSVGPMNSFWVPELGGQKYAMDGMETELILQADKPGSYMGRSANFSGEKFTHMEFEVVAQKGDDFKQWVNEVKQTAPK
LNENKYAKILEPGLVGRMTFSNTHLEWIDHAKQNSHHVERKSAGNHGNPDHDMAKDSHHHGE

Sequences:

>Translated_302_residues
MKRAIWRALSVLPLLFLLSGCVERTAVLNPQGPVARTQYDLIMWSIGFMLLIIVVVFTLFTVVLIRYREKPENADYEPPD
EEGNTLLEIVWTAIPVLIVAALAVPTVKATFAFEKPPTDKVKPITIHVTAANWKWIFSYPEENIETVNYVHIPAGVPVRF
KLTSVGPMNSFWVPELGGQKYAMDGMETELILQADKPGSYMGRSANFSGEKFTHMEFEVVAQKGDDFKQWVNEVKQTAPK
LNENKYAKILEPGLVGRMTFSNTHLEWIDHAKQNSHHVERKSAGNHGNPDHDMAKDSHHHGE
>Mature_302_residues
MKRAIWRALSVLPLLFLLSGCVERTAVLNPQGPVARTQYDLIMWSIGFMLLIIVVVFTLFTVVLIRYREKPENADYEPPD
EEGNTLLEIVWTAIPVLIVAALAVPTVKATFAFEKPPTDKVKPITIHVTAANWKWIFSYPEENIETVNYVHIPAGVPVRF
KLTSVGPMNSFWVPELGGQKYAMDGMETELILQADKPGSYMGRSANFSGEKFTHMEFEVVAQKGDDFKQWVNEVKQTAPK
LNENKYAKILEPGLVGRMTFSNTHLEWIDHAKQNSHHVERKSAGNHGNPDHDMAKDSHHHGE

Specific function: Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=238, Percent_Identity=41.5966386554622, Blast_Score=179, Evalue=2e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR008972
- InterPro:   IPR006332
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF02790 COX2_TM [H]

EC number: 1.10.3.- [C]

Molecular weight: Translated: 34119; Mature: 34119

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRAIWRALSVLPLLFLLSGCVERTAVLNPQGPVARTQYDLIMWSIGFMLLIIVVVFTLF
CCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TVVLIRYREKPENADYEPPDEEGNTLLEIVWTAIPVLIVAALAVPTVKATFAFEKPPTDK
HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHEEEEEECCCCCCC
VKPITIHVTAANWKWIFSYPEENIETVNYVHIPAGVPVRFKLTSVGPMNSFWVPELGGQK
CCEEEEEEEECCEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCE
YAMDGMETELILQADKPGSYMGRSANFSGEKFTHMEFEVVAQKGDDFKQWVNEVKQTAPK
EECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHCCC
LNENKYAKILEPGLVGRMTFSNTHLEWIDHAKQNSHHVERKSAGNHGNPDHDMAKDSHHH
CCCCCHHHHHCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHCCCCCCCCCHHHCCCCCCC
GE
CC
>Mature Secondary Structure
MKRAIWRALSVLPLLFLLSGCVERTAVLNPQGPVARTQYDLIMWSIGFMLLIIVVVFTLF
CCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TVVLIRYREKPENADYEPPDEEGNTLLEIVWTAIPVLIVAALAVPTVKATFAFEKPPTDK
HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHEEEEEECCCCCCC
VKPITIHVTAANWKWIFSYPEENIETVNYVHIPAGVPVRFKLTSVGPMNSFWVPELGGQK
CCEEEEEEEECCEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCE
YAMDGMETELILQADKPGSYMGRSANFSGEKFTHMEFEVVAQKGDDFKQWVNEVKQTAPK
EECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHCCC
LNENKYAKILEPGLVGRMTFSNTHLEWIDHAKQNSHHVERKSAGNHGNPDHDMAKDSHHH
CCCCCHHHHHCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHCCCCCCCCCHHHCCCCCCC
GE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Ubiquinol-8; O(2) [C]

Specific reaction: Ubiquinol-8 + O(2) = Ubiquinone-8 + H2O. [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]