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The map label for this gene is yjeA [H]

Identifier: 138895432

GI number: 138895432

Start: 1881452

End: 1882078

Strand: Reverse

Name: yjeA [H]

Synonym: GTNG_1776

Alternate gene names: 138895432

Gene position: 1882078-1881452 (Counterclockwise)

Preceding gene: 138895433

Following gene: 138895431

Centisome position: 53.01

GC content: 42.74

Gene sequence:

>627_bases
ATGTCTAGATTGGAAATGATTGAACATGTTGAGACGCCTCGCAAGGTGGTCGCCATAACGTTCGATGATGGACCAAATCC
GGTTTATACGTTAAAGGTGCTAGATATATTTGAGAAGATAGCGGGAAAGGTGACCTTTTTCATGATTGGGCGTCATATGG
AGGAACATCCCGAAATTGTAGAAGCTGTCAAATTACAGGGGCATGAAATTGGCAATCATACGTATTCGCATGCTAGACTG
ACCTCTTTAGATGAAGATGACTGCTTGCAAGAGATGGAGCGAACGGATGCAATGATTGCCGCTATGACTGGAAGAAAGGC
TGTTGTCTTCCGTCCACCCTATCTTGACTATAATGAAACTGTTATGTCAATGTGCCATCATTTCGGCTATAAGATGATTG
GTGCTCTTAATACTGATGCGCTAGACTGGGAGCAACCTGGTGTCGATTATATTGTTCAGAAGACCCGCAATCATATAAAA
AATGGAAGCATCCTGCTTTTCCATGATGGATTTGGGGATCGTTCGCAAACGATCCAAGCTGTTAAAATACTCGTTTCAGA
GTTGCGGTTGCAAGGATATGAATTTGTCACCATCAGCGAGTTATTACAGTTGCAGACGATGGATTAA

Upstream 100 bases:

>100_bases
CACCATGCACAGTTTCCGTCTTGGGTACTGTCAGCAAATGAGGAGCGGGTATCAACGACGATGTATCGGTTTGGCATAGC
TGAATAAATGGGAGGATGGC

Downstream 100 bases:

>100_bases
ATAATCTAGGTGATCCCTCTACCAAATTAACATTCTATCGATTGCTATTAAAATGATGCTGTTTGCGTGATAAAAGGATA
AAGAGGAGAAAAGGAGAGAG

Product: xylanase/chitin deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MSRLEMIEHVETPRKVVAITFDDGPNPVYTLKVLDIFEKIAGKVTFFMIGRHMEEHPEIVEAVKLQGHEIGNHTYSHARL
TSLDEDDCLQEMERTDAMIAAMTGRKAVVFRPPYLDYNETVMSMCHHFGYKMIGALNTDALDWEQPGVDYIVQKTRNHIK
NGSILLFHDGFGDRSQTIQAVKILVSELRLQGYEFVTISELLQLQTMD

Sequences:

>Translated_208_residues
MSRLEMIEHVETPRKVVAITFDDGPNPVYTLKVLDIFEKIAGKVTFFMIGRHMEEHPEIVEAVKLQGHEIGNHTYSHARL
TSLDEDDCLQEMERTDAMIAAMTGRKAVVFRPPYLDYNETVMSMCHHFGYKMIGALNTDALDWEQPGVDYIVQKTRNHIK
NGSILLFHDGFGDRSQTIQAVKILVSELRLQGYEFVTISELLQLQTMD
>Mature_207_residues
SRLEMIEHVETPRKVVAITFDDGPNPVYTLKVLDIFEKIAGKVTFFMIGRHMEEHPEIVEAVKLQGHEIGNHTYSHARLT
SLDEDDCLQEMERTDAMIAAMTGRKAVVFRPPYLDYNETVMSMCHHFGYKMIGALNTDALDWEQPGVDYIVQKTRNHIKN
GSILLFHDGFGDRSQTIQAVKILVSELRLQGYEFVTISELLQLQTMD

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323339, Length=190, Percent_Identity=27.8947368421053, Blast_Score=74, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6323338, Length=125, Percent_Identity=31.2, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021729
- InterPro:   IPR011330
- InterPro:   IPR017219
- InterPro:   IPR002509 [H]

Pfam domain/function: PF11738 DUF3298; PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 23816; Mature: 23685

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLEMIEHVETPRKVVAITFDDGPNPVYTLKVLDIFEKIAGKVTFFMIGRHMEEHPEIV
CCHHHHHHHCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHEEEEHHHCHHHCCHHHH
EAVKLQGHEIGNHTYSHARLTSLDEDDCLQEMERTDAMIAAMTGRKAVVFRPPYLDYNET
HHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHEEEECCCEEEEEECCCCCCCHH
VMSMCHHFGYKMIGALNTDALDWEQPGVDYIVQKTRNHIKNGSILLFHDGFGDRSQTIQA
HHHHHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH
VKILVSELRLQGYEFVTISELLQLQTMD
HHHHHHHHHHCCCCEEEHHHHHHHHCCC
>Mature Secondary Structure 
SRLEMIEHVETPRKVVAITFDDGPNPVYTLKVLDIFEKIAGKVTFFMIGRHMEEHPEIV
CHHHHHHHCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHEEEEHHHCHHHCCHHHH
EAVKLQGHEIGNHTYSHARLTSLDEDDCLQEMERTDAMIAAMTGRKAVVFRPPYLDYNET
HHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHEEEECCCEEEEEECCCCCCCHH
VMSMCHHFGYKMIGALNTDALDWEQPGVDYIVQKTRNHIKNGSILLFHDGFGDRSQTIQA
HHHHHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH
VKILVSELRLQGYEFVTISELLQLQTMD
HHHHHHHHHHCCCCEEEHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]