| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is 138895381
Identifier: 138895381
GI number: 138895381
Start: 1824164
End: 1825141
Strand: Direct
Name: 138895381
Synonym: GTNG_1725
Alternate gene names: NA
Gene position: 1824164-1825141 (Clockwise)
Preceding gene: 138895379
Following gene: 138895397
Centisome position: 51.38
GC content: 56.75
Gene sequence:
>978_bases ATGCCGAAACGGTATGAAAATTTAGATAACGTATCCATGCAAAAAACGTGGGCCGATTTTCGCCGCTGGCAGCGAGAACG GAAGCAAAAGCGAAAAGACTTGTCCTATGTCGTACCGCACGCCGTGCCGCCGCAATGGGACCGGCTTCATCAGCCGAACG GACGACCGCAGCTTTGTTGGATCGGCCATTCGACGTTCGTCGTGCAAGTAAACGGCATCACAATCGTCACCGACCCCGTC TGGGCGAAGCGGATGGGAACGGCCAAACGCCTGTCGGCCCCAGGCGTGCCTCTTGAAGAGATGCCACCCGTTGACGCCGT TTTAATCTCCCATGGCCATTACGACCATTTGCATTTCAGCAGCCTTCGCCGATTGCCCGGTGACCCGCATATATTCGTTC CGGCCGGCCTCAGCCGCCTGTTCCACCGGCGTGGCTACCGTCATGTCACTGAACTGTCATGGTGGGAAACAACTACTTTT CGCAACGTATCGCTAACATTTGTTCCTGCTCAACATTGGACGCGGCGGACGCTTTGGGATATGAATACATCACACTGGGG CGGATGGGTCATCGAAGCCAACGGCGCCCCGACGGTTTATTTCGCTGGCGACAGCGGCTATTTCCGCGGTTTTCGCGACA TCGGTGAACGCTTTTTGATCGACTATGCTCTCCTGCCGATCGGTGCGTATGAGCCAGAATGGTTCATGGGGCCGCAGCAC ACAACACCGGAAGAAGCGGTGCAGGCGTTTTTAGATTGCCGCGCCCGTTTGTTTGTTCCAATGCATTACGGTGCCTTCCG GCTCGCCGACGATACACCAAAAGAAGCGCTCGACCGCTTATGGGCCGAGTGGCGGCGGCGCGGATTGGATGACAGCCGCC TGCTTTGCCTGAAGCTCGGCGAGGTGATGGACATCGCTGCTCAACTAGCCGCTAAGCGTGAATATGGGCATGCTGAATCC GACGGAAACGAGCAATGA
Upstream 100 bases:
>100_bases GAACGAAGCATCGATTCCACCACCTGAACAAAGATTTTGTACCGGAAAGAAATGTTTGCTACTCTAATTATAGCGCAAAA CGAGCAAGGAGAGAAAAACG
Downstream 100 bases:
>100_bases ACGTCCGCAACTGAGGCAAAGAAAAAAGCGCTCCGCTGCCCGCGGAACGCTTTTTCTCTTATTCTTTCACTTCTTTTTTC CACAACCCTACCATCAGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MPKRYENLDNVSMQKTWADFRRWQRERKQKRKDLSYVVPHAVPPQWDRLHQPNGRPQLCWIGHSTFVVQVNGITIVTDPV WAKRMGTAKRLSAPGVPLEEMPPVDAVLISHGHYDHLHFSSLRRLPGDPHIFVPAGLSRLFHRRGYRHVTELSWWETTTF RNVSLTFVPAQHWTRRTLWDMNTSHWGGWVIEANGAPTVYFAGDSGYFRGFRDIGERFLIDYALLPIGAYEPEWFMGPQH TTPEEAVQAFLDCRARLFVPMHYGAFRLADDTPKEALDRLWAEWRRRGLDDSRLLCLKLGEVMDIAAQLAAKREYGHAES DGNEQ
Sequences:
>Translated_325_residues MPKRYENLDNVSMQKTWADFRRWQRERKQKRKDLSYVVPHAVPPQWDRLHQPNGRPQLCWIGHSTFVVQVNGITIVTDPV WAKRMGTAKRLSAPGVPLEEMPPVDAVLISHGHYDHLHFSSLRRLPGDPHIFVPAGLSRLFHRRGYRHVTELSWWETTTF RNVSLTFVPAQHWTRRTLWDMNTSHWGGWVIEANGAPTVYFAGDSGYFRGFRDIGERFLIDYALLPIGAYEPEWFMGPQH TTPEEAVQAFLDCRARLFVPMHYGAFRLADDTPKEALDRLWAEWRRRGLDDSRLLCLKLGEVMDIAAQLAAKREYGHAES DGNEQ >Mature_324_residues PKRYENLDNVSMQKTWADFRRWQRERKQKRKDLSYVVPHAVPPQWDRLHQPNGRPQLCWIGHSTFVVQVNGITIVTDPVW AKRMGTAKRLSAPGVPLEEMPPVDAVLISHGHYDHLHFSSLRRLPGDPHIFVPAGLSRLFHRRGYRHVTELSWWETTTFR NVSLTFVPAQHWTRRTLWDMNTSHWGGWVIEANGAPTVYFAGDSGYFRGFRDIGERFLIDYALLPIGAYEPEWFMGPQHT TPEEAVQAFLDCRARLFVPMHYGAFRLADDTPKEALDRLWAEWRRRGLDDSRLLCLKLGEVMDIAAQLAAKREYGHAESD GNEQ
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To K.pneumoniae romA [H]
Homologues:
Organism=Homo sapiens, GI170932483, Length=258, Percent_Identity=38.3720930232558, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI170932481, Length=258, Percent_Identity=38.3720930232558, Blast_Score=180, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17543100, Length=274, Percent_Identity=33.5766423357664, Blast_Score=156, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17543102, Length=274, Percent_Identity=33.5766423357664, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI25148824, Length=274, Percent_Identity=33.5766423357664, Blast_Score=155, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17543104, Length=267, Percent_Identity=35.2059925093633, Blast_Score=154, Evalue=8e-38, Organism=Saccharomyces cerevisiae, GI6325154, Length=260, Percent_Identity=36.5384615384615, Blast_Score=147, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37739; Mature: 37608
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKRYENLDNVSMQKTWADFRRWQRERKQKRKDLSYVVPHAVPPQWDRLHQPNGRPQLCW CCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHCCCCCCCCCEEE IGHSTFVVQVNGITIVTDPVWAKRMGTAKRLSAPGVPLEEMPPVDAVLISHGHYDHLHFS EECCEEEEEECCEEEEECCHHHHHCCCHHHCCCCCCCHHHCCCCCEEEECCCCCCHHHHH SLRRLPGDPHIFVPAGLSRLFHRRGYRHVTELSWWETTTFRNVSLTFVPAQHWTRRTLWD HHHHCCCCCEEEECHHHHHHHHHCCCCHHHHCCCEECCEECEEEEEEEECCHHHHHHHHC MNTSHWGGWVIEANGAPTVYFAGDSGYFRGFRDIGERFLIDYALLPIGAYEPEWFMGPQH CCCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC TTPEEAVQAFLDCRARLFVPMHYGAFRLADDTPKEALDRLWAEWRRRGLDDSRLLCLKLG CCHHHHHHHHHHCHHEEEEEEECCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH EVMDIAAQLAAKREYGHAESDGNEQ HHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PKRYENLDNVSMQKTWADFRRWQRERKQKRKDLSYVVPHAVPPQWDRLHQPNGRPQLCW CCHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHCCCCCCCCCEEE IGHSTFVVQVNGITIVTDPVWAKRMGTAKRLSAPGVPLEEMPPVDAVLISHGHYDHLHFS EECCEEEEEECCEEEEECCHHHHHCCCHHHCCCCCCCHHHCCCCCEEEECCCCCCHHHHH SLRRLPGDPHIFVPAGLSRLFHRRGYRHVTELSWWETTTFRNVSLTFVPAQHWTRRTLWD HHHHCCCCCEEEECHHHHHHHHHCCCCHHHHCCCEECCEECEEEEEEEECCHHHHHHHHC MNTSHWGGWVIEANGAPTVYFAGDSGYFRGFRDIGERFLIDYALLPIGAYEPEWFMGPQH CCCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC TTPEEAVQAFLDCRARLFVPMHYGAFRLADDTPKEALDRLWAEWRRRGLDDSRLLCLKLG CCHHHHHHHHHHCHHEEEEEEECCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH EVMDIAAQLAAKREYGHAESDGNEQ HHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]