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The map label for this gene is ybbC [H]

Identifier: 138894952

GI number: 138894952

Start: 1371867

End: 1373123

Strand: Direct

Name: ybbC [H]

Synonym: GTNG_1290

Alternate gene names: 138894952

Gene position: 1371867-1373123 (Clockwise)

Preceding gene: 138894951

Following gene: 138894954

Centisome position: 38.64

GC content: 44.47

Gene sequence:

>1257_bases
ATGAAAAAGAAATGGTGGATGATGTTTTCTTTGATCTTGTTAAGTTTATTTATGTTTACCGATGCCTTGGCCAAAGCCCC
GAAGAAAAAAGAGCATCCACAGCTAGAGTTGGGCATTGAGGTATTACTCAAAGAGCAGAAGAAGTTAATAAAAGGGAAAC
GGATCGGCCTCATTACGAACCCAACGGGAGTTGATCGGGATCTAAATAGCTCAGTAGACCTTCTTTACAATGATCGTGAT
GTTGAACTCGTCGCTTTATATGGACCGGAACATGGAGTGCGCGGCAGCGCCCAGGCTGGCGAATACGTTCCTTTTTACAT
TGATGAAAAGACTGGCCTGCCCGTATATAGTTTGTACGGGCCAACGAAAAAACCGACACCAGAAATGTTAAAGGGAGTAG
ATATCCTTCTTTTTGATATTCAAGATGTCGGCGCTCGGTTTTACACGTATATTTATACGATGGCGTATGCAATGGAAGCA
GCAAAGGAAAACAACATCCCATTTATTGTGCTAGATCGCCCGAATCCGTTGGGCGGCGTGAAAGTCGAAGGACCTGTTCT
AGAAACGGACTATTCCTCTTTTGTTGGAATGTATCCCATCCCGTTGCGACATGGAATGACTGTCGGTGAATTGGCGTTGC
TTATTAATAAAGAGTTCGGTATTGATGCGGATGTCACCGTCGTGAAAATGAAAGGTTGGAAACGTTCAATGTATTATGAT
GATACGGGATGGCAATGGGTGTTACCATCTCCGAACATGCCAACATTGGATACTGCCTTGGTATACCCCGGAACGGCACT
GTTTGAAGGAACAAATGTATCGGAAGGCCGCGGGACAACAAAGCCATTTGAACTGATTGGCGCTCCGTTTATCGATGGGT
TGCAGTTAGCTGAAAAATTAAACGCTCTTCGCCTTCCGGGCGTACGTTTCCGTCCAGCAAGTTTTCAGCCAACGTTCTCG
AAATATAGCGGAACACTCGTACATGGTGTACAAATTCATGTCACCGATCGCCAAGTGTTCCGACCGGTCGAAACAGGAGT
AGCAATGGTAAAGACGATTCATGATTTGTATCCAGATCAATTTGCTTTTCGCGCTGAAGATAGTCAAGGAATCTCTTATT
TTGATCAACTGATCGGAAATGGATGGGTTCGAAAGGCGATTGAAGAGGGAATGACGATGGAACAAATGAAAAAGCGTTGG
GAAAAGGATGTGGAAGCCTTTCACAAGAAACGTGAGCGATATCTCCTTTATAAGTAG

Upstream 100 bases:

>100_bases
CATGCCAACCGGCCGGCTTCCGGTAACGATTCCACGTTATGATGGCGGTATATTGTACGAATATGGTCATGGCCTTAGTT
ACTAAAACGGGAGGAACGTT

Downstream 100 bases:

>100_bases
CATTTTATTGTGAAAAGGAGTATATATCGCTGCCGTTGAAGCCAGCGCAGGGCGAACCATGAAGAAGAAATGATGCGCGC
TTGTGAGGCGATGAGCCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MKKKWWMMFSLILLSLFMFTDALAKAPKKKEHPQLELGIEVLLKEQKKLIKGKRIGLITNPTGVDRDLNSSVDLLYNDRD
VELVALYGPEHGVRGSAQAGEYVPFYIDEKTGLPVYSLYGPTKKPTPEMLKGVDILLFDIQDVGARFYTYIYTMAYAMEA
AKENNIPFIVLDRPNPLGGVKVEGPVLETDYSSFVGMYPIPLRHGMTVGELALLINKEFGIDADVTVVKMKGWKRSMYYD
DTGWQWVLPSPNMPTLDTALVYPGTALFEGTNVSEGRGTTKPFELIGAPFIDGLQLAEKLNALRLPGVRFRPASFQPTFS
KYSGTLVHGVQIHVTDRQVFRPVETGVAMVKTIHDLYPDQFAFRAEDSQGISYFDQLIGNGWVRKAIEEGMTMEQMKKRW
EKDVEAFHKKRERYLLYK

Sequences:

>Translated_418_residues
MKKKWWMMFSLILLSLFMFTDALAKAPKKKEHPQLELGIEVLLKEQKKLIKGKRIGLITNPTGVDRDLNSSVDLLYNDRD
VELVALYGPEHGVRGSAQAGEYVPFYIDEKTGLPVYSLYGPTKKPTPEMLKGVDILLFDIQDVGARFYTYIYTMAYAMEA
AKENNIPFIVLDRPNPLGGVKVEGPVLETDYSSFVGMYPIPLRHGMTVGELALLINKEFGIDADVTVVKMKGWKRSMYYD
DTGWQWVLPSPNMPTLDTALVYPGTALFEGTNVSEGRGTTKPFELIGAPFIDGLQLAEKLNALRLPGVRFRPASFQPTFS
KYSGTLVHGVQIHVTDRQVFRPVETGVAMVKTIHDLYPDQFAFRAEDSQGISYFDQLIGNGWVRKAIEEGMTMEQMKKRW
EKDVEAFHKKRERYLLYK
>Mature_418_residues
MKKKWWMMFSLILLSLFMFTDALAKAPKKKEHPQLELGIEVLLKEQKKLIKGKRIGLITNPTGVDRDLNSSVDLLYNDRD
VELVALYGPEHGVRGSAQAGEYVPFYIDEKTGLPVYSLYGPTKKPTPEMLKGVDILLFDIQDVGARFYTYIYTMAYAMEA
AKENNIPFIVLDRPNPLGGVKVEGPVLETDYSSFVGMYPIPLRHGMTVGELALLINKEFGIDADVTVVKMKGWKRSMYYD
DTGWQWVLPSPNMPTLDTALVYPGTALFEGTNVSEGRGTTKPFELIGAPFIDGLQLAEKLNALRLPGVRFRPASFQPTFS
KYSGTLVHGVQIHVTDRQVFRPVETGVAMVKTIHDLYPDQFAFRAEDSQGISYFDQLIGNGWVRKAIEEGMTMEQMKKRW
EKDVEAFHKKRERYLLYK

Specific function: Unknown

COG id: COG3876

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008302 [H]

Pfam domain/function: PF07075 DUF1343 [H]

EC number: NA

Molecular weight: Translated: 47417; Mature: 47417

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKWWMMFSLILLSLFMFTDALAKAPKKKEHPQLELGIEVLLKEQKKLIKGKRIGLITN
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC
PTGVDRDLNSSVDLLYNDRDVELVALYGPEHGVRGSAQAGEYVPFYIDEKTGLPVYSLYG
CCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCEEEECC
PTKKPTPEMLKGVDILLFDIQDVGARFYTYIYTMAYAMEAAKENNIPFIVLDRPNPLGGV
CCCCCCHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCE
KVEGPVLETDYSSFVGMYPIPLRHGMTVGELALLINKEFGIDADVTVVKMKGWKRSMYYD
EECCCEEECCHHHHCCCCCCCHHCCCCHHHEEEEEECCCCCCCCEEEEEECCCCCCEEEC
DTGWQWVLPSPNMPTLDTALVYPGTALFEGTNVSEGRGTTKPFELIGAPFIDGLQLAEKL
CCCCEEECCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCHHHHCCCHHHHHHHHHHH
NALRLPGVRFRPASFQPTFSKYSGTLVHGVQIHVTDRQVFRPVETGVAMVKTIHDLYPDQ
HHHCCCCCEECCCCCCCCHHHCCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCC
FAFRAEDSQGISYFDQLIGNGWVRKAIEEGMTMEQMKKRWEKDVEAFHKKRERYLLYK
EEEECCCCCCHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKKWWMMFSLILLSLFMFTDALAKAPKKKEHPQLELGIEVLLKEQKKLIKGKRIGLITN
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC
PTGVDRDLNSSVDLLYNDRDVELVALYGPEHGVRGSAQAGEYVPFYIDEKTGLPVYSLYG
CCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCEEEECC
PTKKPTPEMLKGVDILLFDIQDVGARFYTYIYTMAYAMEAAKENNIPFIVLDRPNPLGGV
CCCCCCHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCE
KVEGPVLETDYSSFVGMYPIPLRHGMTVGELALLINKEFGIDADVTVVKMKGWKRSMYYD
EECCCEEECCHHHHCCCCCCCHHCCCCHHHEEEEEECCCCCCCCEEEEEECCCCCCEEEC
DTGWQWVLPSPNMPTLDTALVYPGTALFEGTNVSEGRGTTKPFELIGAPFIDGLQLAEKL
CCCCEEECCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCHHHHCCCHHHHHHHHHHH
NALRLPGVRFRPASFQPTFSKYSGTLVHGVQIHVTDRQVFRPVETGVAMVKTIHDLYPDQ
HHHCCCCCEECCCCCCCCHHHCCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCC
FAFRAEDSQGISYFDQLIGNGWVRKAIEEGMTMEQMKKRWEKDVEAFHKKRERYLLYK
EEEECCCCCCHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8011666; 9274029; 9384377 [H]