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The map label for this gene is ynbB [H]

Identifier: 138894844

GI number: 138894844

Start: 1250941

End: 1252212

Strand: Direct

Name: ynbB [H]

Synonym: GTNG_1180

Alternate gene names: 138894844

Gene position: 1250941-1252212 (Clockwise)

Preceding gene: 138894843

Following gene: 138894845

Centisome position: 35.23

GC content: 55.97

Gene sequence:

>1272_bases
ATGTTTTGGACACAGTGGAGATACGGAGAAACAATCGCTGCTCTCATCGAGGAAGTTGAAGCACAAATTGCGCCGATCCA
CCGCTCCATCGATGAACGTGTCGAGGCGAACCAATATCGCGTGCTCGACAGTTTTCGCCGCCATCAAGTGAGCGACGGCC
ATTTCATCCCGACGACTGGCTACGGTTATGACGATACAGGGCGCGATACGCTTGATCGCATTTACGCGGATGTATTTGGC
GCAGAAGCGGGCCTTGTCCGTCCGCAAATCATTTCTGGCACGCACGCGATCGCCATCGCGCTGTTTGGCGTGCTGCGCCC
GGGCGATGAACTGCTTTACATCACCGGGGCTCCGTACGACACGCTTGAAGAGATCGTCGGCGTTCGCGGCAGCGGCGTCG
GCTCACTGAAAGAGTTTGGGATTCGTTATCGGAGCGTACCGCTTACGGCGGACGGAGCGGTTGATTTTCCAGCGGTGCGT
GAAGCGATGAACGAACGGACGAAAATGATTGGCATTCAGCGCTCGCGCGGCTACGCGACACGTCCATCGTTTACGGTCGA
CGAAATCGCCGAGATGATCGCTTTTGTCAAGGCAATCAAGCCAGATGTCGTCGTGTTTGTCGACAACTGCTATGGCGAGT
TTGTCGAGGAGAAAGAGCCATGCCATGTCGGCGCTGATCTCATGGCCGGCTCGCTCATTAAAAACCCAGGAGGGGGACTG
GCAAAAACGGGTGGCTATCTTGTCGGAAAGCGGAAGTATGTCGAAGCGTGCGCCTATCGGATGACTTCACCGGGCATCGG
CGCCGAAGTCGGCCCGTCGCTGTACAGCCTGCCTGATATGTACCAAGGATTTTTCCTGGCTCCACATGTTGTCGGACAGG
CGCTCAAAGGAGCGGTGTTCACCGCCGCAATGCTTGAGCGGGTGGGACTCGAGACATCGCCGGCATGGGACGCCAAGCGC
ACCGATCTTGTACAGTCAGTTCGTTTTGACGATCCAGAGCAAATGGTTGCTTTTTGTCAAGCCATCCAAGCTTCTTCCCC
GGTGAACGCCCATTTTACTCCATACCCGAGCGAGATGCCCGGCTATGAGGACAAAGTCATCATGGCCGCTGGTACGTTCG
TGCAAGGAGCGAGCATTGAGTTGACGGCAGACGGGCCACTGCGCCCGCCATATGTCGCATACGTTCAAGGCGGTCTTACG
TATTCACACGTGAAAATCGCTGTTTGTTCGGCGGTTCACCGCTTGCTTGAACAGCAGTTGATTTGTTTGTGA

Upstream 100 bases:

>100_bases
AATGAACAAGGGGGCACGTACGAGTGCCAAGGGTACGTGCTGCCGACGCACCCGCTATATGGGGAGCTTCAATTATTTCA
ACGATAGAAAGGGTTTATCT

Downstream 100 bases:

>100_bases
GAAAATGTAACATCTCATTGACTCATTTCTTAACATTATGGTAAAATAAAGGTATCAAAAGCGAGGAGGAATTGGCATGA
GCAGCCACATTCGTCGTTCC

Product: aluminum resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MFWTQWRYGETIAALIEEVEAQIAPIHRSIDERVEANQYRVLDSFRRHQVSDGHFIPTTGYGYDDTGRDTLDRIYADVFG
AEAGLVRPQIISGTHAIAIALFGVLRPGDELLYITGAPYDTLEEIVGVRGSGVGSLKEFGIRYRSVPLTADGAVDFPAVR
EAMNERTKMIGIQRSRGYATRPSFTVDEIAEMIAFVKAIKPDVVVFVDNCYGEFVEEKEPCHVGADLMAGSLIKNPGGGL
AKTGGYLVGKRKYVEACAYRMTSPGIGAEVGPSLYSLPDMYQGFFLAPHVVGQALKGAVFTAAMLERVGLETSPAWDAKR
TDLVQSVRFDDPEQMVAFCQAIQASSPVNAHFTPYPSEMPGYEDKVIMAAGTFVQGASIELTADGPLRPPYVAYVQGGLT
YSHVKIAVCSAVHRLLEQQLICL

Sequences:

>Translated_423_residues
MFWTQWRYGETIAALIEEVEAQIAPIHRSIDERVEANQYRVLDSFRRHQVSDGHFIPTTGYGYDDTGRDTLDRIYADVFG
AEAGLVRPQIISGTHAIAIALFGVLRPGDELLYITGAPYDTLEEIVGVRGSGVGSLKEFGIRYRSVPLTADGAVDFPAVR
EAMNERTKMIGIQRSRGYATRPSFTVDEIAEMIAFVKAIKPDVVVFVDNCYGEFVEEKEPCHVGADLMAGSLIKNPGGGL
AKTGGYLVGKRKYVEACAYRMTSPGIGAEVGPSLYSLPDMYQGFFLAPHVVGQALKGAVFTAAMLERVGLETSPAWDAKR
TDLVQSVRFDDPEQMVAFCQAIQASSPVNAHFTPYPSEMPGYEDKVIMAAGTFVQGASIELTADGPLRPPYVAYVQGGLT
YSHVKIAVCSAVHRLLEQQLICL
>Mature_423_residues
MFWTQWRYGETIAALIEEVEAQIAPIHRSIDERVEANQYRVLDSFRRHQVSDGHFIPTTGYGYDDTGRDTLDRIYADVFG
AEAGLVRPQIISGTHAIAIALFGVLRPGDELLYITGAPYDTLEEIVGVRGSGVGSLKEFGIRYRSVPLTADGAVDFPAVR
EAMNERTKMIGIQRSRGYATRPSFTVDEIAEMIAFVKAIKPDVVVFVDNCYGEFVEEKEPCHVGADLMAGSLIKNPGGGL
AKTGGYLVGKRKYVEACAYRMTSPGIGAEVGPSLYSLPDMYQGFFLAPHVVGQALKGAVFTAAMLERVGLETSPAWDAKR
TDLVQSVRFDDPEQMVAFCQAIQASSPVNAHFTPYPSEMPGYEDKVIMAAGTFVQGASIELTADGPLRPPYVAYVQGGLT
YSHVKIAVCSAVHRLLEQQLICL

Specific function: Unknown

COG id: COG4100

COG function: function code P; Cystathionine beta-lyase family protein involved in aluminum resistance

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009651
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF06838 Alum_res [H]

EC number: NA

Molecular weight: Translated: 46180; Mature: 46180

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFWTQWRYGETIAALIEEVEAQIAPIHRSIDERVEANQYRVLDSFRRHQVSDGHFIPTTG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCC
YGYDDTGRDTLDRIYADVFGAEAGLVRPQIISGTHAIAIALFGVLRPGDELLYITGAPYD
CCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCEEEEECCCHH
TLEEIVGVRGSGVGSLKEFGIRYRSVPLTADGAVDFPAVREAMNERTKMIGIQRSRGYAT
HHHHHHCCCCCCCCHHHHHCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCC
RPSFTVDEIAEMIAFVKAIKPDVVVFVDNCYGEFVEEKEPCHVGADLMAGSLIKNPGGGL
CCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC
AKTGGYLVGKRKYVEACAYRMTSPGIGAEVGPSLYSLPDMYQGFFLAPHVVGQALKGAVF
CCCCCEEECHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHCCHHHHHHHHHHHHHHHHH
TAAMLERVGLETSPAWDAKRTDLVQSVRFDDPEQMVAFCQAIQASSPVNAHFTPYPSEMP
HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GYEDKVIMAAGTFVQGASIELTADGPLRPPYVAYVQGGLTYSHVKIAVCSAVHRLLEQQL
CCCCCEEEEECCEECCCEEEEECCCCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHHH
ICL
CCC
>Mature Secondary Structure
MFWTQWRYGETIAALIEEVEAQIAPIHRSIDERVEANQYRVLDSFRRHQVSDGHFIPTTG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCC
YGYDDTGRDTLDRIYADVFGAEAGLVRPQIISGTHAIAIALFGVLRPGDELLYITGAPYD
CCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCEEEEECCCHH
TLEEIVGVRGSGVGSLKEFGIRYRSVPLTADGAVDFPAVREAMNERTKMIGIQRSRGYAT
HHHHHHCCCCCCCCHHHHHCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCC
RPSFTVDEIAEMIAFVKAIKPDVVVFVDNCYGEFVEEKEPCHVGADLMAGSLIKNPGGGL
CCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC
AKTGGYLVGKRKYVEACAYRMTSPGIGAEVGPSLYSLPDMYQGFFLAPHVVGQALKGAVF
CCCCCEEECHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHCCHHHHHHHHHHHHHHHHH
TAAMLERVGLETSPAWDAKRTDLVQSVRFDDPEQMVAFCQAIQASSPVNAHFTPYPSEMP
HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GYEDKVIMAAGTFVQGASIELTADGPLRPPYVAYVQGGLTYSHVKIAVCSAVHRLLEQQL
CCCCCEEEEECCEECCCEEEEECCCCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHHH
ICL
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]