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The map label for this gene is ynbA [H]

Identifier: 138894843

GI number: 138894843

Start: 1249680

End: 1250927

Strand: Direct

Name: ynbA [H]

Synonym: GTNG_1179

Alternate gene names: 138894843

Gene position: 1249680-1250927 (Clockwise)

Preceding gene: 138894840

Following gene: 138894844

Centisome position: 35.2

GC content: 54.97

Gene sequence:

>1248_bases
ATGGGCCGAGAACAAGCGATCGTCGTCGGCTGTCAACTCGCCGGTGTTGATGACGAACGGTTCCGCTATTCAATGGAGGA
GCTCGCTTCACTCGTTGCGACAGCGAGCGGCGAAGTGGTGGCGGAACTTGTGCAAAAACGCGAATCGCCGCATCCGGCAA
CGTATATCGGCAAAGGGAAAACAGAAGAGCTTGCCGCCATCGTCAAGCAGCTGGAGCCGGATCTCGTCGTCTTCAACAGC
GAGCTGTCGCCAAGCCAAGCCCGCAATTTGACGAACATGCTTGGTGAGGTGAAAGTCATTGACCGGACGCAGCTCATTTT
AGATATCTTTGCTCAGCGTGCCCGTTCGAAAGAAGGAAAGCTGCAAGTTGAGCTCGCCCAGCTCGAGTATATGCTGCCGC
GCCTTAGCGGCCAAGGGGCGGCGTTATCCCGCCTTGGTGGCGGCATCGGCACGCGCGGCCCGGGGGAGACGAAGCTTGAA
ACGGATCGCCGTCACATTCGCCGCCGCATCGATGACATTAAAGGCGAGCTGCGGCGCGTCGCCGAGCATCGCGGGCGATA
TCGGGAGCGTCGGCAAAAAAACCGCGCATTTCAAGTAGCGCTTGTCGGTTATACAAACGCTGGCAAATCGACGCTCTTTA
ACCGGTTGACCGCTGCCGACTCGTTGGAAGAAAACTTGCTGTTTGCCACGCTCGATCCGCTGACGCGCAAGTGCATTTTG
CCGTGCGGGTATACGGTGCTTCTCACCGATACGGTCGGATTTATTCAAGATTTGCCGACGACGCTTGTCGCCGCGTTTCG
CTCAACGCTTGAAGAAGTGAAAGAAGCGGATTTACTGCTTCATGTCGTCGACTCGTCGCATCCGGATTACGCCGAACATG
AGCGTACCGTATTGCAGCTTTTGGCGGAACTAGGAGCTTCTTCGATTCCGACCGTCACCGTTTACAATAAAAGCGACCGG
CAAGCGCCACAATTTCTCCCGACAACAACTGATGCAATCGTGATGAGCGCACTCTCGGCCACCGATGTTGACCGGCTCCG
CCGCTTTATCGAAGAAGCGGTGAAACAGCAAATGAGTCGTTACGACGTATCAATTCCGAGCGGAAAAGGAAAATTGCTTG
CTCAGTTAAAAACGGACACAATTTTGCAGGAATGGCATTATAATGAACAAGGGGGCACGTACGAGTGCCAAGGGTACGTG
CTGCCGACGCACCCGCTATATGGGGAGCTTCAATTATTTCAACGATAG

Upstream 100 bases:

>100_bases
GGCGGGAAATCAATCATTTTTTGAACGAACTGGCAGGGTGGCAGCTGGATTTGGTATGATGAGAGCAGAGAAAAAGGACC
GTTAGAAAGGAAGGGATGTC

Downstream 100 bases:

>100_bases
AAAGGGTTTATCTATGTTTTGGACACAGTGGAGATACGGAGAAACAATCGCTGCTCTCATCGAGGAAGTTGAAGCACAAA
TTGCGCCGATCCACCGCTCC

Product: GTP-binding protein hflX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MGREQAIVVGCQLAGVDDERFRYSMEELASLVATASGEVVAELVQKRESPHPATYIGKGKTEELAAIVKQLEPDLVVFNS
ELSPSQARNLTNMLGEVKVIDRTQLILDIFAQRARSKEGKLQVELAQLEYMLPRLSGQGAALSRLGGGIGTRGPGETKLE
TDRRHIRRRIDDIKGELRRVAEHRGRYRERRQKNRAFQVALVGYTNAGKSTLFNRLTAADSLEENLLFATLDPLTRKCIL
PCGYTVLLTDTVGFIQDLPTTLVAAFRSTLEEVKEADLLLHVVDSSHPDYAEHERTVLQLLAELGASSIPTVTVYNKSDR
QAPQFLPTTTDAIVMSALSATDVDRLRRFIEEAVKQQMSRYDVSIPSGKGKLLAQLKTDTILQEWHYNEQGGTYECQGYV
LPTHPLYGELQLFQR

Sequences:

>Translated_415_residues
MGREQAIVVGCQLAGVDDERFRYSMEELASLVATASGEVVAELVQKRESPHPATYIGKGKTEELAAIVKQLEPDLVVFNS
ELSPSQARNLTNMLGEVKVIDRTQLILDIFAQRARSKEGKLQVELAQLEYMLPRLSGQGAALSRLGGGIGTRGPGETKLE
TDRRHIRRRIDDIKGELRRVAEHRGRYRERRQKNRAFQVALVGYTNAGKSTLFNRLTAADSLEENLLFATLDPLTRKCIL
PCGYTVLLTDTVGFIQDLPTTLVAAFRSTLEEVKEADLLLHVVDSSHPDYAEHERTVLQLLAELGASSIPTVTVYNKSDR
QAPQFLPTTTDAIVMSALSATDVDRLRRFIEEAVKQQMSRYDVSIPSGKGKLLAQLKTDTILQEWHYNEQGGTYECQGYV
LPTHPLYGELQLFQR
>Mature_414_residues
GREQAIVVGCQLAGVDDERFRYSMEELASLVATASGEVVAELVQKRESPHPATYIGKGKTEELAAIVKQLEPDLVVFNSE
LSPSQARNLTNMLGEVKVIDRTQLILDIFAQRARSKEGKLQVELAQLEYMLPRLSGQGAALSRLGGGIGTRGPGETKLET
DRRHIRRRIDDIKGELRRVAEHRGRYRERRQKNRAFQVALVGYTNAGKSTLFNRLTAADSLEENLLFATLDPLTRKCILP
CGYTVLLTDTVGFIQDLPTTLVAAFRSTLEEVKEADLLLHVVDSSHPDYAEHERTVLQLLAELGASSIPTVTVYNKSDRQ
APQFLPTTTDAIVMSALSATDVDRLRRFIEEAVKQQMSRYDVSIPSGKGKLLAQLKTDTILQEWHYNEQGGTYECQGYVL
PTHPLYGELQLFQR

Specific function: Unknown

COG id: COG2262

COG function: function code R; GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI310133116, Length=275, Percent_Identity=31.6363636363636, Blast_Score=112, Evalue=9e-25,
Organism=Homo sapiens, GI310133118, Length=238, Percent_Identity=34.453781512605, Blast_Score=112, Evalue=9e-25,
Organism=Homo sapiens, GI310124269, Length=267, Percent_Identity=31.8352059925094, Blast_Score=112, Evalue=9e-25,
Organism=Homo sapiens, GI310124267, Length=267, Percent_Identity=31.8352059925094, Blast_Score=112, Evalue=9e-25,
Organism=Homo sapiens, GI310124171, Length=267, Percent_Identity=31.8352059925094, Blast_Score=112, Evalue=9e-25,
Organism=Homo sapiens, GI310124169, Length=267, Percent_Identity=31.8352059925094, Blast_Score=112, Evalue=9e-25,
Organism=Escherichia coli, GI1790615, Length=403, Percent_Identity=42.4317617866005, Blast_Score=271, Evalue=6e-74,
Organism=Caenorhabditis elegans, GI17561038, Length=262, Percent_Identity=34.3511450381679, Blast_Score=136, Evalue=2e-32,
Organism=Drosophila melanogaster, GI24650079, Length=354, Percent_Identity=32.7683615819209, Blast_Score=131, Evalue=7e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016496
- InterPro:   IPR006073
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 46324; Mature: 46193

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGREQAIVVGCQLAGVDDERFRYSMEELASLVATASGEVVAELVQKRESPHPATYIGKGK
CCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEECCCC
TEELAAIVKQLEPDLVVFNSELSPSQARNLTNMLGEVKVIDRTQLILDIFAQRARSKEGK
HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCEEHHHHHHHHHHHHHHHHCCCCCC
LQVELAQLEYMLPRLSGQGAALSRLGGGIGTRGPGETKLETDRRHIRRRIDDIKGELRRV
EEEHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AEHRGRYRERRQKNRAFQVALVGYTNAGKSTLFNRLTAADSLEENLLFATLDPLTRKCIL
HHHHHHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHH
PCGYTVLLTDTVGFIQDLPTTLVAAFRSTLEEVKEADLLLHVVDSSHPDYAEHERTVLQL
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHH
LAELGASSIPTVTVYNKSDRQAPQFLPTTTDAIVMSALSATDVDRLRRFIEEAVKQQMSR
HHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
YDVSIPSGKGKLLAQLKTDTILQEWHYNEQGGTYECQGYVLPTHPLYGELQLFQR
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHHCC
>Mature Secondary Structure 
GREQAIVVGCQLAGVDDERFRYSMEELASLVATASGEVVAELVQKRESPHPATYIGKGK
CCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEECCCC
TEELAAIVKQLEPDLVVFNSELSPSQARNLTNMLGEVKVIDRTQLILDIFAQRARSKEGK
HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCEEHHHHHHHHHHHHHHHHCCCCCC
LQVELAQLEYMLPRLSGQGAALSRLGGGIGTRGPGETKLETDRRHIRRRIDDIKGELRRV
EEEHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AEHRGRYRERRQKNRAFQVALVGYTNAGKSTLFNRLTAADSLEENLLFATLDPLTRKCIL
HHHHHHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHH
PCGYTVLLTDTVGFIQDLPTTLVAAFRSTLEEVKEADLLLHVVDSSHPDYAEHERTVLQL
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHH
LAELGASSIPTVTVYNKSDRQAPQFLPTTTDAIVMSALSATDVDRLRRFIEEAVKQQMSR
HHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
YDVSIPSGKGKLLAQLKTDTILQEWHYNEQGGTYECQGYVLPTHPLYGELQLFQR
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]