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The map label for this gene is ctaC [H]

Identifier: 138894617

GI number: 138894617

Start: 1018866

End: 1019936

Strand: Direct

Name: ctaC [H]

Synonym: GTNG_0947

Alternate gene names: 138894617

Gene position: 1018866-1019936 (Clockwise)

Preceding gene: 138894616

Following gene: 138894618

Centisome position: 28.7

GC content: 47.99

Gene sequence:

>1071_bases
ATGAAGAAAGGGCTACGGAACTGGCGCTTATTTTCCTTGTTTGGGATGATGGCGCTGTTGCTCGCCGGCTGCGGCAAGCC
GTTTTTGTCGACGCTTCAGCCTGCCGGTGAAGTAGCGAACATGCAGTATTCGCTCATGTTGTTGAGCACGTCGATTATGG
TGCTCGTCATTGTTGTCGTAGCGATTATCTTCGTCTACGTTGTGATCCGCTTCCGGCGGCGGAAAGGGGAAGAAAATAAA
ATTCCGAAGCAAGTGGAAGGGAACCATAAACTGGAAATTATTTGGACTGTCATTCCGATTATCCTCTTGCTTATTTTAGC
GGTGCCGACGGTAGCGGCGACGTTTAAGTTGGCGGATGTAAAGCCGATGAATGACAAAAACCGCGATAAAGACACGGTTG
TTGTCAACGTGCGCGCCAATTTGTACTGGTGGGAGTTTGAATACCCGGATTATGGCATCATTACGAGCCAAGATTTAGTC
GTGCCGACGAACGAAAAAGTCTACTTTAATTTGGTGGCGTCGGATGTTAAACACTCGTTCTGGATTCCGGCCGTTGGTGG
CAAAATCGACACGAACACGGACAATAAAAACCAGTTTTGGCTCGTCTTTGACCAAAAAGCGACAGACAAAGCAGGCGGTG
TCTTCTACGGCAAATGTGCTGAGCTTTGTGGTCCGTCTCATGCATTGATGGATTTCAAAGTGCGCCCGCTGCCCCGTGCA
GAGTTTGATGCATGGGTAGAAAAAATGCAAAAAGCGGAAAATCCGGTTGTGACCGATCCGGTTGCTAAACAAGGGGAAGA
AATCTTCAATAAAAGCTGTATTGGCTGCCATGCGGTGTCGCCGGTAGACAATCGTCCGGAGCAAGCGCGTACAGCGCCGA
ACTTGGCGGGCTTCGCTGACCGTGAACGGATTGCCGGCATTTTGGAACACAATGAAGAAAACTTAAAAAGATGGCTGAAA
GACCCTGAAGGTGTGAAACCTGGAAATAAAATGACGGGTACATATGGCCAGCTGACAGAAGAACAGCTTGATGCATTGAC
AAAATATTTAATGAGCTTAAAAGTGGAATAA

Upstream 100 bases:

>100_bases
GATGGTCATCGCCACGATTTGGTGAACAGGTTAAAATTCTTTCTTCGTGAAAGAATTTATATACATTTATCCATCAAAGA
AAGAGGGGTTTGATTAGGCT

Downstream 100 bases:

>100_bases
GGCATAAAAGGGAGGTTTCGCTGTGAGTACGATCGCTCGCAAAAAGGGCGTTGGGGCCGTTTTATGGGATTACCTGACGA
CGGTCGATCATAAAAAGATC

Product: cytochrome caa3-type oxidase II

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II; Oxidase aa(3) subunit 2 [H]

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MKKGLRNWRLFSLFGMMALLLAGCGKPFLSTLQPAGEVANMQYSLMLLSTSIMVLVIVVVAIIFVYVVIRFRRRKGEENK
IPKQVEGNHKLEIIWTVIPIILLLILAVPTVAATFKLADVKPMNDKNRDKDTVVVNVRANLYWWEFEYPDYGIITSQDLV
VPTNEKVYFNLVASDVKHSFWIPAVGGKIDTNTDNKNQFWLVFDQKATDKAGGVFYGKCAELCGPSHALMDFKVRPLPRA
EFDAWVEKMQKAENPVVTDPVAKQGEEIFNKSCIGCHAVSPVDNRPEQARTAPNLAGFADRERIAGILEHNEENLKRWLK
DPEGVKPGNKMTGTYGQLTEEQLDALTKYLMSLKVE

Sequences:

>Translated_356_residues
MKKGLRNWRLFSLFGMMALLLAGCGKPFLSTLQPAGEVANMQYSLMLLSTSIMVLVIVVVAIIFVYVVIRFRRRKGEENK
IPKQVEGNHKLEIIWTVIPIILLLILAVPTVAATFKLADVKPMNDKNRDKDTVVVNVRANLYWWEFEYPDYGIITSQDLV
VPTNEKVYFNLVASDVKHSFWIPAVGGKIDTNTDNKNQFWLVFDQKATDKAGGVFYGKCAELCGPSHALMDFKVRPLPRA
EFDAWVEKMQKAENPVVTDPVAKQGEEIFNKSCIGCHAVSPVDNRPEQARTAPNLAGFADRERIAGILEHNEENLKRWLK
DPEGVKPGNKMTGTYGQLTEEQLDALTKYLMSLKVE
>Mature_356_residues
MKKGLRNWRLFSLFGMMALLLAGCGKPFLSTLQPAGEVANMQYSLMLLSTSIMVLVIVVVAIIFVYVVIRFRRRKGEENK
IPKQVEGNHKLEIIWTVIPIILLLILAVPTVAATFKLADVKPMNDKNRDKDTVVVNVRANLYWWEFEYPDYGIITSQDLV
VPTNEKVYFNLVASDVKHSFWIPAVGGKIDTNTDNKNQFWLVFDQKATDKAGGVFYGKCAELCGPSHALMDFKVRPLPRA
EFDAWVEKMQKAENPVVTDPVAKQGEEIFNKSCIGCHAVSPVDNRPEQARTAPNLAGFADRERIAGILEHNEENLKRWLK
DPEGVKPGNKMTGTYGQLTEEQLDALTKYLMSLKVE

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Homo sapiens, GI251831110, Length=180, Percent_Identity=25, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI1786635, Length=245, Percent_Identity=29.3877551020408, Blast_Score=110, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6226540, Length=236, Percent_Identity=24.5762711864407, Blast_Score=83, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR014222
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF00116 COX2; PF02790 COX2_TM; PF00034 Cytochrom_C [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 40132; Mature: 40132

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00078 COX2 ; PS50999 COX2_TM ; PS50857 COX2_CUA ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGLRNWRLFSLFGMMALLLAGCGKPFLSTLQPAGEVANMQYSLMLLSTSIMVLVIVVV
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHH
AIIFVYVVIRFRRRKGEENKIPKQVEGNHKLEIIWTVIPIILLLILAVPTVAATFKLADV
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHEEECCC
KPMNDKNRDKDTVVVNVRANLYWWEFEYPDYGIITSQDLVVPTNEKVYFNLVASDVKHSF
CCCCCCCCCCCEEEEEEEEEEEEEEECCCCCCEEECCCEEECCCCCEEEEEEHHHHCCCE
WIPAVGGKIDTNTDNKNQFWLVFDQKATDKAGGVFYGKCAELCGPSHALMDFKVRPLPRA
EECCCCCEEECCCCCCCEEEEEEECCCCCCCCCEEHHHHHHHCCCCCHHHEEECCCCCCH
EFDAWVEKMQKAENPVVTDPVAKQGEEIFNKSCIGCHAVSPVDNRPEQARTAPNLAGFAD
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCH
RERIAGILEHNEENLKRWLKDPEGVKPGNKMTGTYGQLTEEQLDALTKYLMSLKVE
HHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKGLRNWRLFSLFGMMALLLAGCGKPFLSTLQPAGEVANMQYSLMLLSTSIMVLVIVVV
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHH
AIIFVYVVIRFRRRKGEENKIPKQVEGNHKLEIIWTVIPIILLLILAVPTVAATFKLADV
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHEEECCC
KPMNDKNRDKDTVVVNVRANLYWWEFEYPDYGIITSQDLVVPTNEKVYFNLVASDVKHSF
CCCCCCCCCCCEEEEEEEEEEEEEEECCCCCCEEECCCEEECCCCCEEEEEEHHHHCCCE
WIPAVGGKIDTNTDNKNQFWLVFDQKATDKAGGVFYGKCAELCGPSHALMDFKVRPLPRA
EECCCCCEEECCCCCCCEEEEEEECCCCCCCCCEEHHHHHHHCCCCCHHHEEECCCCCCH
EFDAWVEKMQKAENPVVTDPVAKQGEEIFNKSCIGCHAVSPVDNRPEQARTAPNLAGFAD
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCH
RERIAGILEHNEENLKRWLKDPEGVKPGNKMTGTYGQLTEEQLDALTKYLMSLKVE
HHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1964459 [H]