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The map label for this gene is dctB [H]

Identifier: 138894177

GI number: 138894177

Start: 566493

End: 567539

Strand: Direct

Name: dctB [H]

Synonym: GTNG_0503

Alternate gene names: 138894177

Gene position: 566493-567539 (Clockwise)

Preceding gene: 138894174

Following gene: 138894178

Centisome position: 15.96

GC content: 47.28

Gene sequence:

>1047_bases
ATGGGAAAGCTATGGAAATTGTGGGTACTCCTTCTTATGATCGGCATCGGCCTTGTTGCTTGGAACGTCAGCCGCCAAGC
CGATCAGGAACGGATTGTGTACGACGATGAACAAAAAGGATTGCAAAAACAAATTATCATCTATTTTAGCCACGTCGTTG
CGGAAAATACGCCGAAGGGGCTAGCAGCGCAAAAGTTTGCCGAACTCGTGGAACAAAAGACGAACGGCCGTGTCAAAGTC
GAAGTGTTCGCGAACGGTTCGCTTTACTCGGATGGGGAGGAGCTTGATGCGCTGCTGCGCGGTGATGTACAAATGATTGC
CCCGTCATTTTCAAAGGTCACAGAACTGATTCCGGAGTGGCAAGTGCTCGATTTGCCCTTTTTATTTCGCGATGATGACG
ATGTGCGTCGTGTGTTCACTGGAAAAGTCGGAGCTGAACTGCTCGGAATGCTTGAAGAAAAAGGAATCAAAGGACTAGCG
TTTTGGAGCAACGGCTTTAAACAGATGATGGGAACAACTCGTCCGCTTATCGAGCCTGATGACTTCCGGGGCTTGCGTTT
TCGCATTATGCCGAGCGAAGTGATCGATAAGCAGTTCCGCTTGCTTGGCGGTGAACCGGTTGCCGTTTCGTTTGACCATG
TATACCGGGCGCTTGAGCAACATGAGTTTGATGGTCAGGAAAATACGATTTCCAACATCTATTCAAAGGGGTTTTACAAG
TTTCAACCATATATTACGATTAGCAACCACGGCTATCTTGGCTATGCAGTCATGATGAACCGATCGTTTTGGGACAGTTT
GCCGAAAGAGATTCAACAAAAAATAGCCGAAGCGATGACCGAGGCGACCCAATGGAATTTGCGGCAGTCAAAGGCACAAA
ACGAGCGGGAATTGCAACAGCTGAAGCAGCAAAAGAGCGTCCAGCTTTACTTGTTATCGGAGGAGGAAAGAAAGAGATGG
GAACAGAAATTTGCCCCGTTGTATAAGGAGTTTACGAGACAATTCGGTTCTAGAATGTTGAATGAAATCAAGGGATTCCG
TGAATAA

Upstream 100 bases:

>100_bases
ACTCCTCTGTTTAGGCAGAAAATTCATTATTATTTATTCTAACATGATTCCGGTGATATGATAAAAAAGAAGAAAACGAT
GGACGAAAACGGTGTGGACA

Downstream 100 bases:

>100_bases
GCTTCCATCAGTGGAAGCTTTTTTTATGGGAATCAACGCAGTTTTGTAGTTGCAACTTCGCAAACGTTTAAGACCAAAAA
GACCAAAATGACCATTATCA

Product: C4-dicarboxylate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MGKLWKLWVLLLMIGIGLVAWNVSRQADQERIVYDDEQKGLQKQIIIYFSHVVAENTPKGLAAQKFAELVEQKTNGRVKV
EVFANGSLYSDGEELDALLRGDVQMIAPSFSKVTELIPEWQVLDLPFLFRDDDDVRRVFTGKVGAELLGMLEEKGIKGLA
FWSNGFKQMMGTTRPLIEPDDFRGLRFRIMPSEVIDKQFRLLGGEPVAVSFDHVYRALEQHEFDGQENTISNIYSKGFYK
FQPYITISNHGYLGYAVMMNRSFWDSLPKEIQQKIAEAMTEATQWNLRQSKAQNERELQQLKQQKSVQLYLLSEEERKRW
EQKFAPLYKEFTRQFGSRMLNEIKGFRE

Sequences:

>Translated_348_residues
MGKLWKLWVLLLMIGIGLVAWNVSRQADQERIVYDDEQKGLQKQIIIYFSHVVAENTPKGLAAQKFAELVEQKTNGRVKV
EVFANGSLYSDGEELDALLRGDVQMIAPSFSKVTELIPEWQVLDLPFLFRDDDDVRRVFTGKVGAELLGMLEEKGIKGLA
FWSNGFKQMMGTTRPLIEPDDFRGLRFRIMPSEVIDKQFRLLGGEPVAVSFDHVYRALEQHEFDGQENTISNIYSKGFYK
FQPYITISNHGYLGYAVMMNRSFWDSLPKEIQQKIAEAMTEATQWNLRQSKAQNERELQQLKQQKSVQLYLLSEEERKRW
EQKFAPLYKEFTRQFGSRMLNEIKGFRE
>Mature_347_residues
GKLWKLWVLLLMIGIGLVAWNVSRQADQERIVYDDEQKGLQKQIIIYFSHVVAENTPKGLAAQKFAELVEQKTNGRVKVE
VFANGSLYSDGEELDALLRGDVQMIAPSFSKVTELIPEWQVLDLPFLFRDDDDVRRVFTGKVGAELLGMLEEKGIKGLAF
WSNGFKQMMGTTRPLIEPDDFRGLRFRIMPSEVIDKQFRLLGGEPVAVSFDHVYRALEQHEFDGQENTISNIYSKGFYKF
QPYITISNHGYLGYAVMMNRSFWDSLPKEIQQKIAEAMTEATQWNLRQSKAQNERELQQLKQQKSVQLYLLSEEERKRWE
QKFAPLYKEFTRQFGSRMLNEIKGFRE

Specific function: Part of the binding-protein-dependent transport system for uptake of C4-dicarboxylates. Responsible for growth on fumarate and succinate but not malate. Is not directly involved in C4-dicarboxylate uptake, but plays a sensory role in the dctS/dctR two-com

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Secreted (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=275, Percent_Identity=28, Blast_Score=147, Evalue=7e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 40459; Mature: 40328

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKLWKLWVLLLMIGIGLVAWNVSRQADQERIVYDDEQKGLQKQIIIYFSHVVAENTPKG
CCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEECCHHHCHHHHHHHHHHHHHHCCCCCC
LAAQKFAELVEQKTNGRVKVEVFANGSLYSDGEELDALLRGDVQMIAPSFSKVTELIPEW
HHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHCCHHHHCCCHHHHHHHCCCC
QVLDLPFLFRDDDDVRRVFTGKVGAELLGMLEEKGIKGLAFWSNGFKQMMGTTRPLIEPD
EEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCCCC
DFRGLRFRIMPSEVIDKQFRLLGGEPVAVSFDHVYRALEQHEFDGQENTISNIYSKGFYK
CCCCEEEEECCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHCCCEE
FQPYITISNHGYLGYAVMMNRSFWDSLPKEIQQKIAEAMTEATQWNLRQSKAQNERELQQ
EEEEEEECCCCCEEEHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LKQQKSVQLYLLSEEERKRWEQKFAPLYKEFTRQFGSRMLNEIKGFRE
HHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GKLWKLWVLLLMIGIGLVAWNVSRQADQERIVYDDEQKGLQKQIIIYFSHVVAENTPKG
CHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEECCHHHCHHHHHHHHHHHHHHCCCCCC
LAAQKFAELVEQKTNGRVKVEVFANGSLYSDGEELDALLRGDVQMIAPSFSKVTELIPEW
HHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHCCHHHHCCCHHHHHHHCCCC
QVLDLPFLFRDDDDVRRVFTGKVGAELLGMLEEKGIKGLAFWSNGFKQMMGTTRPLIEPD
EEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCCCC
DFRGLRFRIMPSEVIDKQFRLLGGEPVAVSFDHVYRALEQHEFDGQENTISNIYSKGFYK
CCCCEEEEECCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHCCCEE
FQPYITISNHGYLGYAVMMNRSFWDSLPKEIQQKIAEAMTEATQWNLRQSKAQNERELQQ
EEEEEEECCCCCEEEHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LKQQKSVQLYLLSEEERKRWEQKFAPLYKEFTRQFGSRMLNEIKGFRE
HHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 10708364 [H]