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The map label for this gene is lctB [H]

Identifier: 138894162

GI number: 138894162

Start: 543771

End: 544175

Strand: Direct

Name: lctB [H]

Synonym: GTNG_0488

Alternate gene names: 138894162

Gene position: 543771-544175 (Clockwise)

Preceding gene: 138894161

Following gene: 138894163

Centisome position: 15.32

GC content: 53.33

Gene sequence:

>405_bases
ATGGATTACGCCTTCCTCGGAGTGGTTACCGCCGTACTGCTCGGTAGCATCACCTCAATTTGGACAGCGCGCGTTCAAGT
GACGCACCGCCTCTCACTCGACAGTCTGTGGGTGCTCGTTCAATGGTATGTAACGATGCTGCTCGGTTTTGCCATGATTT
ATATGATTTTGCAGGTGAATGGCCATGCAGTGTTCACTCCGTCCTCAAATAGCGACGTGGATAACCGCTTGTCTTTGCTT
GGGGATAGCTTGTACTTAAGCGGCATAACGCTCTTATCAGTGGGATACGGAGATGTGACCCCGATCGGCATCGGACGGTG
GATCGCGATCACTGAGGCGTTGCTCGGCTACATTATGCCAGCTGTCATCGTAGCGCGCACCGTATTTGACTGGGACCGCC
GCTAA

Upstream 100 bases:

>100_bases
TTCAAGTACGATCACTATCGAGATCGCGGCGGTTCACTCCGTCATAATTGTCCATTCGGCCACGTATATATGAACAACGG
ACAAGGATGGAGGGAATGTG

Downstream 100 bases:

>100_bases
CAGTTGCAATTTTCTTCCCGCTCCGTTACGCTAAAAGAAAATAAAGCAGACGGAGGGAACGTCATGATAATTGCCATTGG
CCAACCAGCCCCGGATTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MDYAFLGVVTAVLLGSITSIWTARVQVTHRLSLDSLWVLVQWYVTMLLGFAMIYMILQVNGHAVFTPSSNSDVDNRLSLL
GDSLYLSGITLLSVGYGDVTPIGIGRWIAITEALLGYIMPAVIVARTVFDWDRR

Sequences:

>Translated_134_residues
MDYAFLGVVTAVLLGSITSIWTARVQVTHRLSLDSLWVLVQWYVTMLLGFAMIYMILQVNGHAVFTPSSNSDVDNRLSLL
GDSLYLSGITLLSVGYGDVTPIGIGRWIAITEALLGYIMPAVIVARTVFDWDRR
>Mature_134_residues
MDYAFLGVVTAVLLGSITSIWTARVQVTHRLSLDSLWVLVQWYVTMLLGFAMIYMILQVNGHAVFTPSSNSDVDNRLSLL
GDSLYLSGITLLSVGYGDVTPIGIGRWIAITEALLGYIMPAVIVARTVFDWDRR

Specific function: Unknown

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013099 [H]

Pfam domain/function: PF07885 Ion_trans_2 [H]

EC number: NA

Molecular weight: Translated: 14826; Mature: 14826

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYAFLGVVTAVLLGSITSIWTARVQVTHRLSLDSLWVLVQWYVTMLLGFAMIYMILQVN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GHAVFTPSSNSDVDNRLSLLGDSLYLSGITLLSVGYGDVTPIGIGRWIAITEALLGYIMP
CCEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHH
AVIVARTVFDWDRR
HHHHHHHHHHCCCC
>Mature Secondary Structure
MDYAFLGVVTAVLLGSITSIWTARVQVTHRLSLDSLWVLVQWYVTMLLGFAMIYMILQVN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GHAVFTPSSNSDVDNRLSLLGDSLYLSGITLLSVGYGDVTPIGIGRWIAITEALLGYIMP
CCEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHH
AVIVARTVFDWDRR
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3029705 [H]