Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
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Accession | NC_009328 |
Length | 3,550,319 |
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The map label for this gene is 138894122
Identifier: 138894122
GI number: 138894122
Start: 503542
End: 506169
Strand: Direct
Name: 138894122
Synonym: GTNG_0448
Alternate gene names: NA
Gene position: 503542-506169 (Clockwise)
Preceding gene: 138894121
Following gene: 138894123
Centisome position: 14.18
GC content: 53.69
Gene sequence:
>2628_bases ATGTCGCTTGAGCGAACGGTTGTGATGTTGAATGAAGATGACACGCAAGGCCGTCCGCTCGCTGACCTTGTCAAGGAAGC GGCAAAGTCGATTGCTCCGCTTTGGCCAATTTCGTCATTTATCGCCCGCCATCCATGGATGGGATTAGAAGGGGAGCTGT TTGCCGATGCAGCCGACCGATGGCAACAAGTTTATGGGATTGACTTGTATCCGCCGATGACCGTGTTCTATACAGCATTG AAAAAAGGGGAGATTGATCCTGTGTTCGTTGAGCGGCGGCTGCAGAGCTGGCTTGACAAACAGTCACTCCCGGTGCCACG TCACGAAGCGGAACGGCTTTGCCGCTCCTTCCTTTGGAACGACACCGTGCCGGAAGAAGCGTTCAGTCTCCCAGAGATGG CTCAGTTAGCGGAAGGAACGCAACTGCGTCCGATGGCTGTCCAGCCGATTAGCAAGCGGTTGGATCAAATTGCTAAACGG CTCGATCAACAAATGATCAAGTGGTGCAAGTTATTTTACGATGAAAGTGGAGGAACATGGACGCTTCCTCAACGTGAACA AGGTTTTTATCAGGCATGGCGCCAGCTTGTAGTCACGGACCCGTCGCTTTCAAAAGATGAGCGGAAACGTTTTTCCGGTT GGCCGCATGATAAACATGAAGCACTGAACTACGCGCTCGAAAAGCTAGGGATACGGGACGAAGACGTGGTTGCGTATTTG GAAGCTCATTTGTTGGCATTGCCCGGATGGGCCGGTATGGCAGTATGGAGATCGCATCGAGCAGGCGATGAGGTGGGCGG ATTGATCGATTATTTAGCTGTCCGGCTCTCGATCGAGTGGGTACTTACGGCCCCGCATTTGCCGTTACACGGGGAAGAAA ATGGAGAGCGCCGCGATGTTCTTCCACTGTTGGCAGCTTGGTTTTATTGGACCGGAATGACGCCGGAAGACTGGCGGCGC TTGCGGACGAACGAACAACAAGCCCGCCTGGCTTTTGCGGATCGCTTTTGGCGGATTGACCGCCATCACCTTTGGCTTGA GGCGTGGGAAGATACAGATGAAGCAAAGCTAAAAGAGGCGGTGTCCACACGTCATCGGATGAGCGAACCGGAGCAGGTCG CGGCTCAGTTATTGTTTTGTATTGACGTTCGTTCCGAGCCGTTTCGCCGTCATTTGGAAGCAGCTGGGCCGTTTGAAACA TACGGATGTGCGGGATTTTTCGGCTTGCCGATTCAAACACGCGTGCTTGACAGCGAAGACGTCCATCCGTCATGTCCGGC AATTGTCGATCCCCGGCATGAAATTCGCGAAGTGGCGCCCCCTGAAGAAGTGGAGCCATATCGCTTCCGGCGTGATATGT TTCGCTTTGTCAGCAAGACGTTTAAAAAAATGAAGCAGCATGTGTTGGCTGGATTATTGCTTCCGGAAATGAGCGGGCCA TGGCTTGGCTTACATACGCTCGCCCGGAGTGCGGCTCCGGCTTGGGCTGGGCAGGTCATTCGCTATACTAAAAAGTCGGT GGAACAAAAACCAAAGACGACGTTGTCGCTTCACTACCATGAAGGGGATGAAACGACCGGCCTGCCGATCGGTTTGACAA ATGAAGAGCAAGTCGAATATGTGAAGCAGCTGCTTGTCACCATCGGTCTAACGTCCTCGTTTGCCCCGCTTGTTGTCGTT TGCGGTCATGGAAGCGAAACGACAAACAATCCGTACGCCTCGGCGCTTGACTGCGGGGCGTGCGGCGGTGTTGCAGGAGC GTTTAATGCTCGAGTGTTTGCCGCACTGGCGAATTTACCTAGTGTGCGAGCTGAGCTAGCAAAAGAGGGAATCGTCATTC CGGATGAGACCGTGTTTGTCGCTGCTGAACATATCACGACGGTTGATGAATTGCGCTGGTTGGAGGTGCCGCCGTTATCG GAAGCAGCCCAACAGTCGTTTGATCGGCTCAAGCAAGCACTTCACGATGTGAGCCGCCAGGCAAATGCTGAACGGATGAT GAAGTTGCCGCATGTTGGCGGCAAGCCGCGCGATCCGGTAGCAGAAGCACAGCGCCGCGCGGTTGACTGGAGCGAAATCC GTCCGGAATGGGGATTGGCAGGAAATACTGCTTTTTTCATCGGACGTCGGGCATTAACGAAGGGTGTTCATTTGGATGGA AGAGTGTTTTTGCATAGCTACGATTGGCGCGACGACCCGACCGGTGAAGCGTTAGCCCGCATTATTGCCGGACCGGCGAC TGTCGGGCAGTGGATTAATTTGCAATACTATGCGTCAACAGTCGCTCCACACTATTATGGAAGTGGCGATAAAACGACCC AGACGGTCACAGGCGGCATCGGTGTCATGCAAGGGAATGGAAGCGATCTGCTGGCCGGCTTGCCGTGGCAGTCAGTCGTG TCCTCCGACCGCGAGCTGTTCCATTTCCCGCTCCGGCTGCTCGTCATTATTGAAGCGCCGTCCTATTATATCGAGCGATT GCTCAATGAAAACAGCGAATTTCGGCGCAAAGTCGAGAATGGTTGGCTCCGTCTGTCCTCCATTGATCCAAATAGCGGGG CATGGATGAAATGGGGGGACACCCATTCCTTATCAGTGTGGTCACGTGAAATGGGAATAGGAAAATAA
Upstream 100 bases:
>100_bases TTTGTGCACTTTGGAGAACCGCGTCCAGCGGCGATGGAGACGCATCCACATTATTTGACAACCTATATGAAGGAGGGAAT GGCCCGTGAGTAAAAGTGCA
Downstream 100 bases:
>100_bases TTGCCGCTTGCTCGGTTTACGTAGCAAGCGATTTTTTTATTAAAAATAAAAACGATTTGCTGTTATCGCGGGTATATAAA GTGAAAACTCCTTTCAGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 875; Mature: 874
Protein sequence:
>875_residues MSLERTVVMLNEDDTQGRPLADLVKEAAKSIAPLWPISSFIARHPWMGLEGELFADAADRWQQVYGIDLYPPMTVFYTAL KKGEIDPVFVERRLQSWLDKQSLPVPRHEAERLCRSFLWNDTVPEEAFSLPEMAQLAEGTQLRPMAVQPISKRLDQIAKR LDQQMIKWCKLFYDESGGTWTLPQREQGFYQAWRQLVVTDPSLSKDERKRFSGWPHDKHEALNYALEKLGIRDEDVVAYL EAHLLALPGWAGMAVWRSHRAGDEVGGLIDYLAVRLSIEWVLTAPHLPLHGEENGERRDVLPLLAAWFYWTGMTPEDWRR LRTNEQQARLAFADRFWRIDRHHLWLEAWEDTDEAKLKEAVSTRHRMSEPEQVAAQLLFCIDVRSEPFRRHLEAAGPFET YGCAGFFGLPIQTRVLDSEDVHPSCPAIVDPRHEIREVAPPEEVEPYRFRRDMFRFVSKTFKKMKQHVLAGLLLPEMSGP WLGLHTLARSAAPAWAGQVIRYTKKSVEQKPKTTLSLHYHEGDETTGLPIGLTNEEQVEYVKQLLVTIGLTSSFAPLVVV CGHGSETTNNPYASALDCGACGGVAGAFNARVFAALANLPSVRAELAKEGIVIPDETVFVAAEHITTVDELRWLEVPPLS EAAQQSFDRLKQALHDVSRQANAERMMKLPHVGGKPRDPVAEAQRRAVDWSEIRPEWGLAGNTAFFIGRRALTKGVHLDG RVFLHSYDWRDDPTGEALARIIAGPATVGQWINLQYYASTVAPHYYGSGDKTTQTVTGGIGVMQGNGSDLLAGLPWQSVV SSDRELFHFPLRLLVIIEAPSYYIERLLNENSEFRRKVENGWLRLSSIDPNSGAWMKWGDTHSLSVWSREMGIGK
Sequences:
>Translated_875_residues MSLERTVVMLNEDDTQGRPLADLVKEAAKSIAPLWPISSFIARHPWMGLEGELFADAADRWQQVYGIDLYPPMTVFYTAL KKGEIDPVFVERRLQSWLDKQSLPVPRHEAERLCRSFLWNDTVPEEAFSLPEMAQLAEGTQLRPMAVQPISKRLDQIAKR LDQQMIKWCKLFYDESGGTWTLPQREQGFYQAWRQLVVTDPSLSKDERKRFSGWPHDKHEALNYALEKLGIRDEDVVAYL EAHLLALPGWAGMAVWRSHRAGDEVGGLIDYLAVRLSIEWVLTAPHLPLHGEENGERRDVLPLLAAWFYWTGMTPEDWRR LRTNEQQARLAFADRFWRIDRHHLWLEAWEDTDEAKLKEAVSTRHRMSEPEQVAAQLLFCIDVRSEPFRRHLEAAGPFET YGCAGFFGLPIQTRVLDSEDVHPSCPAIVDPRHEIREVAPPEEVEPYRFRRDMFRFVSKTFKKMKQHVLAGLLLPEMSGP WLGLHTLARSAAPAWAGQVIRYTKKSVEQKPKTTLSLHYHEGDETTGLPIGLTNEEQVEYVKQLLVTIGLTSSFAPLVVV CGHGSETTNNPYASALDCGACGGVAGAFNARVFAALANLPSVRAELAKEGIVIPDETVFVAAEHITTVDELRWLEVPPLS EAAQQSFDRLKQALHDVSRQANAERMMKLPHVGGKPRDPVAEAQRRAVDWSEIRPEWGLAGNTAFFIGRRALTKGVHLDG RVFLHSYDWRDDPTGEALARIIAGPATVGQWINLQYYASTVAPHYYGSGDKTTQTVTGGIGVMQGNGSDLLAGLPWQSVV SSDRELFHFPLRLLVIIEAPSYYIERLLNENSEFRRKVENGWLRLSSIDPNSGAWMKWGDTHSLSVWSREMGIGK >Mature_874_residues SLERTVVMLNEDDTQGRPLADLVKEAAKSIAPLWPISSFIARHPWMGLEGELFADAADRWQQVYGIDLYPPMTVFYTALK KGEIDPVFVERRLQSWLDKQSLPVPRHEAERLCRSFLWNDTVPEEAFSLPEMAQLAEGTQLRPMAVQPISKRLDQIAKRL DQQMIKWCKLFYDESGGTWTLPQREQGFYQAWRQLVVTDPSLSKDERKRFSGWPHDKHEALNYALEKLGIRDEDVVAYLE AHLLALPGWAGMAVWRSHRAGDEVGGLIDYLAVRLSIEWVLTAPHLPLHGEENGERRDVLPLLAAWFYWTGMTPEDWRRL RTNEQQARLAFADRFWRIDRHHLWLEAWEDTDEAKLKEAVSTRHRMSEPEQVAAQLLFCIDVRSEPFRRHLEAAGPFETY GCAGFFGLPIQTRVLDSEDVHPSCPAIVDPRHEIREVAPPEEVEPYRFRRDMFRFVSKTFKKMKQHVLAGLLLPEMSGPW LGLHTLARSAAPAWAGQVIRYTKKSVEQKPKTTLSLHYHEGDETTGLPIGLTNEEQVEYVKQLLVTIGLTSSFAPLVVVC GHGSETTNNPYASALDCGACGGVAGAFNARVFAALANLPSVRAELAKEGIVIPDETVFVAAEHITTVDELRWLEVPPLSE AAQQSFDRLKQALHDVSRQANAERMMKLPHVGGKPRDPVAEAQRRAVDWSEIRPEWGLAGNTAFFIGRRALTKGVHLDGR VFLHSYDWRDDPTGEALARIIAGPATVGQWINLQYYASTVAPHYYGSGDKTTQTVTGGIGVMQGNGSDLLAGLPWQSVVS SDRELFHFPLRLLVIIEAPSYYIERLLNENSEFRRKVENGWLRLSSIDPNSGAWMKWGDTHSLSVWSREMGIGK
Specific function: Unknown
COG id: COG3002
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0753 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y448_GEOTN (A4IKH6)
Other databases:
- EMBL: CP000557 - RefSeq: YP_001124575.1 - STRING: A4IKH6 - GeneID: 4965392 - GenomeReviews: CP000557_GR - KEGG: gtn:GTNG_0448 - NMPDR: fig|420246.5.peg.420 - eggNOG: COG3002 - HOGENOM: HBG520117 - OMA: FAEDWSE - ProtClustDB: CLSK884660 - BioCyc: GTHE420246:GTNG_0448-MONOMER - HAMAP: MF_01871 - InterPro: IPR018752
Pfam domain/function: PF10070 DUF2309
EC number: NA
Molecular weight: Translated: 99024; Mature: 98892
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLERTVVMLNEDDTQGRPLADLVKEAAKSIAPLWPISSFIARHPWMGLEGELFADAADR CCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHH WQQVYGIDLYPPMTVFYTALKKGEIDPVFVERRLQSWLDKQSLPVPRHEAERLCRSFLWN HHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC DTVPEEAFSLPEMAQLAEGTQLRPMAVQPISKRLDQIAKRLDQQMIKWCKLFYDESGGTW CCCCHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE TLPQREQGFYQAWRQLVVTDPSLSKDERKRFSGWPHDKHEALNYALEKLGIRDEDVVAYL CCCCHHHHHHHHHHHHEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH EAHLLALPGWAGMAVWRSHRAGDEVGGLIDYLAVRLSIEWVLTAPHLPLHGEENGERRDV HHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCHHHH LPLLAAWFYWTGMTPEDWRRLRTNEQQARLAFADRFWRIDRHHLWLEAWEDTDEAKLKEA HHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH VSTRHRMSEPEQVAAQLLFCIDVRSEPFRRHLEAAGPFETYGCAGFFGLPIQTRVLDSED HHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEECCCCEEEECCCCC VHPSCPAIVDPRHEIREVAPPEEVEPYRFRRDMFRFVSKTFKKMKQHVLAGLLLPEMSGP CCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC WLGLHTLARSAAPAWAGQVIRYTKKSVEQKPKTTLSLHYHEGDETTGLPIGLTNEEQVEY CHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEECCCCHHHHHH VKQLLVTIGLTSSFAPLVVVCGHGSETTNNPYASALDCGACGGVAGAFNARVFAALANLP HHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCH SVRAELAKEGIVIPDETVFVAAEHITTVDELRWLEVPPLSEAAQQSFDRLKQALHDVSRQ HHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH ANAERMMKLPHVGGKPRDPVAEAQRRAVDWSEIRPEWGLAGNTAFFIGRRALTKGVHLDG CCHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCC RVFLHSYDWRDDPTGEALARIIAGPATVGQWINLQYYASTVAPHYYGSGDKTTQTVTGGI EEEEEECCCCCCCCHHHHHHHHHCCHHHHHHEEEEEHHHHCCCCEECCCCCCCEEEECCE GVMQGNGSDLLAGLPWQSVVSSDRELFHFPLRLLVIIEAPSYYIERLLNENSEFRRKVEN EEEECCCCCCEECCCHHHHHHCCHHHHHHCEEEEEEECCCHHHHHHHHCCCHHHHHHHHC GWLRLSSIDPNSGAWMKWGDTHSLSVWSREMGIGK CCEEEEECCCCCCCEEEECCCCCHHHHHHHCCCCC >Mature Secondary Structure SLERTVVMLNEDDTQGRPLADLVKEAAKSIAPLWPISSFIARHPWMGLEGELFADAADR CCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHH WQQVYGIDLYPPMTVFYTALKKGEIDPVFVERRLQSWLDKQSLPVPRHEAERLCRSFLWN HHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC DTVPEEAFSLPEMAQLAEGTQLRPMAVQPISKRLDQIAKRLDQQMIKWCKLFYDESGGTW CCCCHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE TLPQREQGFYQAWRQLVVTDPSLSKDERKRFSGWPHDKHEALNYALEKLGIRDEDVVAYL CCCCHHHHHHHHHHHHEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH EAHLLALPGWAGMAVWRSHRAGDEVGGLIDYLAVRLSIEWVLTAPHLPLHGEENGERRDV HHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCHHHH LPLLAAWFYWTGMTPEDWRRLRTNEQQARLAFADRFWRIDRHHLWLEAWEDTDEAKLKEA HHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH VSTRHRMSEPEQVAAQLLFCIDVRSEPFRRHLEAAGPFETYGCAGFFGLPIQTRVLDSED HHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEECCCCEEEECCCCC VHPSCPAIVDPRHEIREVAPPEEVEPYRFRRDMFRFVSKTFKKMKQHVLAGLLLPEMSGP CCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC WLGLHTLARSAAPAWAGQVIRYTKKSVEQKPKTTLSLHYHEGDETTGLPIGLTNEEQVEY CHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEECCCCHHHHHH VKQLLVTIGLTSSFAPLVVVCGHGSETTNNPYASALDCGACGGVAGAFNARVFAALANLP HHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCH SVRAELAKEGIVIPDETVFVAAEHITTVDELRWLEVPPLSEAAQQSFDRLKQALHDVSRQ HHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH ANAERMMKLPHVGGKPRDPVAEAQRRAVDWSEIRPEWGLAGNTAFFIGRRALTKGVHLDG CCHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCC RVFLHSYDWRDDPTGEALARIIAGPATVGQWINLQYYASTVAPHYYGSGDKTTQTVTGGI EEEEEECCCCCCCCHHHHHHHHHCCHHHHHHEEEEEHHHHCCCCEECCCCCCCEEEECCE GVMQGNGSDLLAGLPWQSVVSSDRELFHFPLRLLVIIEAPSYYIERLLNENSEFRRKVEN EEEECCCCCCEECCCHHHHHHCCHHHHHHCEEEEEEECCCHHHHHHHHCCCHHHHHHHHC GWLRLSSIDPNSGAWMKWGDTHSLSVWSREMGIGK CCEEEEECCCCCCCEEEECCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA