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The map label for this gene is yckC [H]

Identifier: 138894018

GI number: 138894018

Start: 391517

End: 391930

Strand: Direct

Name: yckC [H]

Synonym: GTNG_0344

Alternate gene names: 138894018

Gene position: 391517-391930 (Clockwise)

Preceding gene: 138894016

Following gene: 138894019

Centisome position: 11.03

GC content: 48.79

Gene sequence:

>414_bases
ATGGCAGTGACAAACCCGGCTGGATTTTGGAGGCGGCTGTTGGCAAACTTGTTAGACGCTATTGTCATCGGCATTCCGAT
TTCAATCATCGGCTATTTGATTACAGGTAGTGCGGAAGAGAACTGGTTTACGAATTTGGTAGAGTTGTTGTACGCCCTAA
TTGTTCCTGCTGTCTGGTATGGGTATACGGTCGGTAAGCGGATGATTGGCATCCGGATTGCGAAAGTGAATGGCGGCAAG
GTTGGCATCGGCACGATGTTTTTGCGCTTGTTCGTTGGCGGACTTGTTTATGTTATCACGTTAGGCATCGGTCTGATCGT
TAGCGCCATTATGGTGGCTGCAAGGGAAGACAAACGGTCGATTCACGATTTTATCGCCGGAACGTATGTCACAACCGAAA
AGCCGACGGTGTAA

Upstream 100 bases:

>100_bases
TTGATCGTATGGACGTCTCCCTGAGATTTAGGCTAAAATAAAGACAATTGTACTGTAGGTGACGAATACAATATAGAAAA
GGTAGAAGGGGGAAAGATAC

Downstream 100 bases:

>100_bases
ATAAGGAAAAAGCGGTCTTCCAACTGGAAGCCCGCTTTTTATGTTGATGTTCAAGATAGATAAACTTCGGGGGGCAGGCG
GCTTAGAAGGTCATGTGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MAVTNPAGFWRRLLANLLDAIVIGIPISIIGYLITGSAEENWFTNLVELLYALIVPAVWYGYTVGKRMIGIRIAKVNGGK
VGIGTMFLRLFVGGLVYVITLGIGLIVSAIMVAAREDKRSIHDFIAGTYVTTEKPTV

Sequences:

>Translated_137_residues
MAVTNPAGFWRRLLANLLDAIVIGIPISIIGYLITGSAEENWFTNLVELLYALIVPAVWYGYTVGKRMIGIRIAKVNGGK
VGIGTMFLRLFVGGLVYVITLGIGLIVSAIMVAAREDKRSIHDFIAGTYVTTEKPTV
>Mature_136_residues
AVTNPAGFWRRLLANLLDAIVIGIPISIIGYLITGSAEENWFTNLVELLYALIVPAVWYGYTVGKRMIGIRIAKVNGGKV
GIGTMFLRLFVGGLVYVITLGIGLIVSAIMVAAREDKRSIHDFIAGTYVTTEKPTV

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010432 [H]

Pfam domain/function: PF06271 RDD [H]

EC number: NA

Molecular weight: Translated: 14871; Mature: 14740

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTNPAGFWRRLLANLLDAIVIGIPISIIGYLITGSAEENWFTNLVELLYALIVPAVWY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
GYTVGKRMIGIRIAKVNGGKVGIGTMFLRLFVGGLVYVITLGIGLIVSAIMVAAREDKRS
HHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHDFIAGTYVTTEKPTV
HHHHHHHCEECCCCCCC
>Mature Secondary Structure 
AVTNPAGFWRRLLANLLDAIVIGIPISIIGYLITGSAEENWFTNLVELLYALIVPAVWY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
GYTVGKRMIGIRIAKVNGGKVGIGTMFLRLFVGGLVYVITLGIGLIVSAIMVAAREDKRS
HHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHDFIAGTYVTTEKPTV
HHHHHHHCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377; 7704255 [H]