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The map label for this gene is trg [C]

Identifier: 138894019

GI number: 138894019

Start: 392268

End: 393512

Strand: Direct

Name: trg [C]

Synonym: GTNG_0345

Alternate gene names: 138894019

Gene position: 392268-393512 (Clockwise)

Preceding gene: 138894018

Following gene: 138894020

Centisome position: 11.05

GC content: 53.25

Gene sequence:

>1245_bases
ATGAGCTATATCATCCGCACGATGTTCGTCGTGATTCCGAGCACGGCGGTAATCGGCCTTGCGATATGTCTAGCTAACAG
CATTCGCGGGGCGGCGTTTTGGTGGACGTTAGCCGCTACGTTGCTGCTTGGTGCGATTGTTGGCTTCATTTCGGCAACGC
TGAATTATCGGCGGTTTGTTGCTCCAATTGCCGTCATTAACAAATACTTAAGCAAGATGACAAGTGGGGACTTAACAGTG
CGCGTACCGCTCAACAGCGTGCGGCAGTTGCGGCCGATTGCCACATCGTTAAACAATATGGCGGATGCTTGGCAAGAGGT
GATAGGCCGCATTCAACACCATGCGGACGAAGTGTCGCAGTTTTCCAACCAGTTAGCTACTGTTGCCGAACAGACGACGA
GGGCGACAGAACAAATTGCGGCAACGATGGACGGACTTGCTTCCCATGCGGAAGAGCAGGCGAGTGCAGCCCGCGGCACA
GCGGAATCCGTCAATGATATTTCCCGAACGCTCAGTGATGTTGCCCGTCAAACAAAAGAAGTGGCACACAGCGCCCAAGA
AACGGCAACAAAAGCAGGGGATGGCAAGCAATCTGTGATGCAAATGTCTGAGCAAATGCAATTTATTTATGACCACGTTC
AATCGCTCGGCCAAGTCGTTAAAGGGCTCGGGGAGCGATCGAACGAGATTGGACAAATTACTGAAGCGATTACGAGCATC
GCGTCACAGACGAATTTACTGGCGCTCAATGCGGCGATCGAAGCGGCGCGTGCCGGTGAGCAAGGGAAAGGATTTGCCGT
TGTCGCGGACGAGGTGCGGAAGTTGGCGGAGCAGTCAGTGCACTCAGCGCAGCAAATTTCCGATCTGATTAGCTACATCC
AGGAAGAGACGAAGCAGGCAATCGCCTCCACGGAACGGGTCGTCGCTGAAGTGGCGCAAGGGTTGGACGTCGTCGCTGTT
GCCGGTCAGTCGTTTGCCGATATTCGTGAGGCGGTCGGTCAAGTAAGCGAACAAATTGGACAAGTATCGTCTGCGATTGA
ACAAATGACGGGCCATGCCCGCCAGGTGGATGAGGCGTTCCAACAGATGACCAAAATTGTCGAACAGTCAGCAGCTAGTG
CTGCCAATGTATCGGCAGCGACTCAAGAACAAATGGCTTCTGTTGAAGAAATTGCTTCTTCGTCGGCATCGCTCGGTCAG
ATGGCGGACGAGATGCGGACGATGTTAAAGCAATTTTCGGTGTGA

Upstream 100 bases:

>100_bases
TAGGCACAAAGAAGGAAAACCTATGCACATTGCCGAATATGTCAATGCTGTATAAAACATTTTTAGGCGATAGAAAAAGG
GGGAGAAAGGTTTGTCGTTA

Downstream 100 bases:

>100_bases
AGCGGAAAAAAAGCGCGTTTACTGAGGAAAGAAACACGGTACATCAGTTGTGATATGGAATAAAATGGTTTGTTTATTTT
CTCATTATGTAGTAAAATAA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MSYIIRTMFVVIPSTAVIGLAICLANSIRGAAFWWTLAATLLLGAIVGFISATLNYRRFVAPIAVINKYLSKMTSGDLTV
RVPLNSVRQLRPIATSLNNMADAWQEVIGRIQHHADEVSQFSNQLATVAEQTTRATEQIAATMDGLASHAEEQASAARGT
AESVNDISRTLSDVARQTKEVAHSAQETATKAGDGKQSVMQMSEQMQFIYDHVQSLGQVVKGLGERSNEIGQITEAITSI
ASQTNLLALNAAIEAARAGEQGKGFAVVADEVRKLAEQSVHSAQQISDLISYIQEETKQAIASTERVVAEVAQGLDVVAV
AGQSFADIREAVGQVSEQIGQVSSAIEQMTGHARQVDEAFQQMTKIVEQSAASAANVSAATQEQMASVEEIASSSASLGQ
MADEMRTMLKQFSV

Sequences:

>Translated_414_residues
MSYIIRTMFVVIPSTAVIGLAICLANSIRGAAFWWTLAATLLLGAIVGFISATLNYRRFVAPIAVINKYLSKMTSGDLTV
RVPLNSVRQLRPIATSLNNMADAWQEVIGRIQHHADEVSQFSNQLATVAEQTTRATEQIAATMDGLASHAEEQASAARGT
AESVNDISRTLSDVARQTKEVAHSAQETATKAGDGKQSVMQMSEQMQFIYDHVQSLGQVVKGLGERSNEIGQITEAITSI
ASQTNLLALNAAIEAARAGEQGKGFAVVADEVRKLAEQSVHSAQQISDLISYIQEETKQAIASTERVVAEVAQGLDVVAV
AGQSFADIREAVGQVSEQIGQVSSAIEQMTGHARQVDEAFQQMTKIVEQSAASAANVSAATQEQMASVEEIASSSASLGQ
MADEMRTMLKQFSV
>Mature_413_residues
SYIIRTMFVVIPSTAVIGLAICLANSIRGAAFWWTLAATLLLGAIVGFISATLNYRRFVAPIAVINKYLSKMTSGDLTVR
VPLNSVRQLRPIATSLNNMADAWQEVIGRIQHHADEVSQFSNQLATVAEQTTRATEQIAATMDGLASHAEEQASAARGTA
ESVNDISRTLSDVARQTKEVAHSAQETATKAGDGKQSVMQMSEQMQFIYDHVQSLGQVVKGLGERSNEIGQITEAITSIA
SQTNLLALNAAIEAARAGEQGKGFAVVADEVRKLAEQSVHSAQQISDLISYIQEETKQAIASTERVVAEVAQGLDVVAVA
GQSFADIREAVGQVSEQIGQVSSAIEQMTGHARQVDEAFQQMTKIVEQSAASAANVSAATQEQMASVEEIASSSASLGQM
ADEMRTMLKQFSV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=368, Percent_Identity=33.9673913043478, Blast_Score=134, Evalue=2e-32,
Organism=Escherichia coli, GI1788194, Length=344, Percent_Identity=32.8488372093023, Blast_Score=125, Evalue=6e-30,
Organism=Escherichia coli, GI2367378, Length=341, Percent_Identity=30.2052785923754, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1788195, Length=319, Percent_Identity=30.0940438871473, Blast_Score=119, Evalue=4e-28,
Organism=Escherichia coli, GI1789453, Length=380, Percent_Identity=29.7368421052632, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 44219; Mature: 44088

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYIIRTMFVVIPSTAVIGLAICLANSIRGAAFWWTLAATLLLGAIVGFISATLNYRRFV
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APIAVINKYLSKMTSGDLTVRVPLNSVRQLRPIATSLNNMADAWQEVIGRIQHHADEVSQ
HHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSNQLATVAEQTTRATEQIAATMDGLASHAEEQASAARGTAESVNDISRTLSDVARQTKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VAHSAQETATKAGDGKQSVMQMSEQMQFIYDHVQSLGQVVKGLGERSNEIGQITEAITSI
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ASQTNLLALNAAIEAARAGEQGKGFAVVADEVRKLAEQSVHSAQQISDLISYIQEETKQA
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IASTERVVAEVAQGLDVVAVAGQSFADIREAVGQVSEQIGQVSSAIEQMTGHARQVDEAF
HHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQMTKIVEQSAASAANVSAATQEQMASVEEIASSSASLGQMADEMRTMLKQFSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SYIIRTMFVVIPSTAVIGLAICLANSIRGAAFWWTLAATLLLGAIVGFISATLNYRRFV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APIAVINKYLSKMTSGDLTVRVPLNSVRQLRPIATSLNNMADAWQEVIGRIQHHADEVSQ
HHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSNQLATVAEQTTRATEQIAATMDGLASHAEEQASAARGTAESVNDISRTLSDVARQTKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VAHSAQETATKAGDGKQSVMQMSEQMQFIYDHVQSLGQVVKGLGERSNEIGQITEAITSI
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ASQTNLLALNAAIEAARAGEQGKGFAVVADEVRKLAEQSVHSAQQISDLISYIQEETKQA
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IASTERVVAEVAQGLDVVAVAGQSFADIREAVGQVSEQIGQVSSAIEQMTGHARQVDEAF
HHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQMTKIVEQSAASAANVSAATQEQMASVEEIASSSASLGQMADEMRTMLKQFSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA