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The map label for this gene is rsbP [H]

Identifier: 138894016

GI number: 138894016

Start: 388875

End: 390398

Strand: Direct

Name: rsbP [H]

Synonym: GTNG_0342

Alternate gene names: 138894016

Gene position: 388875-390398 (Clockwise)

Preceding gene: 138894015

Following gene: 138894018

Centisome position: 10.95

GC content: 50.92

Gene sequence:

>1524_bases
ATGATTGATGAGTTTTTGGAATATCTGCGACATCACAAAAACTTTACATGGCGGGAGTTGTTCGACAGACTTGAAAAAAT
GAACATGCTGTTCGGGTCGAATGATTATGTATACTGGTTGGCAGCACCGGATAAAAGAAAAATATTGTTCATTTCTTCGT
CGTGTGAGCAGCTATACGGCCTGCCTCCGGCTGCCTTTTATCATGATGAGGATATATGGATGAAAATATCCTACCCCGAC
GACCATGCCAAAGCGGAGGCAAAATGGGCACTCCCTTGGGAATCTAAGGTGAGTACACAAACATACCGCATCGTTAATCA
GCGGGACGGGTCTGTGCGTTGGGTGCTTGAGCGGATGGTTCCTGTGCTTAGTGAGGCAGAGGAAGGAAACCTGATCAGCG
GCTTTGTCATGGACATCACGGAGACGAAAAGAAACAGGGACGAGATTCGGCTCGCTGAGCAAGTGTATGCGTCCATCGAA
CAGGCGATGCTTGTGACTGACGATGAGTTTGCCGTTCGGTTCGTCAACTCGGCGTTTACGAAAATCACCGGCCATAGTAC
GGAAGTCGTCGGCCAGCCGCTGCATACGCTCTATGCTGGTTATTACGCTGCCTGGTTTTACGAAGTGATCAAAAACGGAA
TTGTGGAAAGCGGGCAATGGCAGGGACGGGTGCGCTGGCGGCGGAAAAACGGATCGGTGTCTGTTAGGCGAACAACGGTG
CGGGCTGTTCACAATCAAGAAGGGAACATTTCCTTTTACTTATTTTTGTTTTCCGGCCTGCATGAGACGCCTTATGCGGA
GGCAATGAAGGATGATTTAAAGCTGGCCCGCGAAGTGCAGAAGCGTGTATTAAGCAAACCGTTGTCAGCCAATGGAATCG
ACATCGCTGGCACATACATTCCGTCGCAGGAGTTGGGCGGCGACATGTATGCATGGTATCAGATCGACAACCAGCGGTAC
GGCATTTTTTTAATGGACGTGATGGGGCATGGAGCGGCGGCTTCACTCATTTGCATGTCAGTTCGCTCGCTCCTTAACGG
CATCATCCGCAAAGCGATCGTCCCACAAGCCGTGTTCTACGAGTTGAACCGTCATATGCGCCAGCTGTATCATGAAAACG
GGCAGATGACGTATTATTTTACTGCTGTGTATGTCCTTGTTGATGTGAAGAAACGGATGATCGAGTATGCATCGGCCGGC
CATCCGCCCGGATTTTTATTCCAACCGGACGGCACGGTATTCGAATTGGATCGCGGGTGTGCGCCGATCGGGTTGCTCCC
TGGGCTTTTCGTTGATAGCGGCCAGTTGCGCTATGAGTCTGGGGCGACGCTTGTCCTGTATTCCGATGGGGCTATTGAAG
GGGAGGCGGGTTCTGTCCGCCAAAATATTGAGACGTTCCGTGATACGCTAGCGCCGTATGTTTCTCTCGATGAGCGTGCG
CTGTTAGCCTGCTTACGCCGTCATTTTATCCAAAAAGGATCGCTTCGGGACGATTTCTCAGCGGTGGTTGCTAAGCTTAG
ATAG

Upstream 100 bases:

>100_bases
GCTCGCAGAAATTTTCCGTATTGTAAAATTTTATTCGTTTATGAAATTATTCGCCACGGAGAAAGAAGCAATTGATTATT
TAAGCGGAGAATGACGTTTT

Downstream 100 bases:

>100_bases
GGGGAAAGTCGCCAATGTCAGCCGACTTGGCAGGGCTGTCATGTTGGGACTCTCCATTTGTGAGTAAAAGGATGCCCGAA
AAAATGGGCATCCTTTTACA

Product: sigma factor sigB regulation protein RsbU-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MIDEFLEYLRHHKNFTWRELFDRLEKMNMLFGSNDYVYWLAAPDKRKILFISSSCEQLYGLPPAAFYHDEDIWMKISYPD
DHAKAEAKWALPWESKVSTQTYRIVNQRDGSVRWVLERMVPVLSEAEEGNLISGFVMDITETKRNRDEIRLAEQVYASIE
QAMLVTDDEFAVRFVNSAFTKITGHSTEVVGQPLHTLYAGYYAAWFYEVIKNGIVESGQWQGRVRWRRKNGSVSVRRTTV
RAVHNQEGNISFYLFLFSGLHETPYAEAMKDDLKLAREVQKRVLSKPLSANGIDIAGTYIPSQELGGDMYAWYQIDNQRY
GIFLMDVMGHGAAASLICMSVRSLLNGIIRKAIVPQAVFYELNRHMRQLYHENGQMTYYFTAVYVLVDVKKRMIEYASAG
HPPGFLFQPDGTVFELDRGCAPIGLLPGLFVDSGQLRYESGATLVLYSDGAIEGEAGSVRQNIETFRDTLAPYVSLDERA
LLACLRRHFIQKGSLRDDFSAVVAKLR

Sequences:

>Translated_507_residues
MIDEFLEYLRHHKNFTWRELFDRLEKMNMLFGSNDYVYWLAAPDKRKILFISSSCEQLYGLPPAAFYHDEDIWMKISYPD
DHAKAEAKWALPWESKVSTQTYRIVNQRDGSVRWVLERMVPVLSEAEEGNLISGFVMDITETKRNRDEIRLAEQVYASIE
QAMLVTDDEFAVRFVNSAFTKITGHSTEVVGQPLHTLYAGYYAAWFYEVIKNGIVESGQWQGRVRWRRKNGSVSVRRTTV
RAVHNQEGNISFYLFLFSGLHETPYAEAMKDDLKLAREVQKRVLSKPLSANGIDIAGTYIPSQELGGDMYAWYQIDNQRY
GIFLMDVMGHGAAASLICMSVRSLLNGIIRKAIVPQAVFYELNRHMRQLYHENGQMTYYFTAVYVLVDVKKRMIEYASAG
HPPGFLFQPDGTVFELDRGCAPIGLLPGLFVDSGQLRYESGATLVLYSDGAIEGEAGSVRQNIETFRDTLAPYVSLDERA
LLACLRRHFIQKGSLRDDFSAVVAKLR
>Mature_507_residues
MIDEFLEYLRHHKNFTWRELFDRLEKMNMLFGSNDYVYWLAAPDKRKILFISSSCEQLYGLPPAAFYHDEDIWMKISYPD
DHAKAEAKWALPWESKVSTQTYRIVNQRDGSVRWVLERMVPVLSEAEEGNLISGFVMDITETKRNRDEIRLAEQVYASIE
QAMLVTDDEFAVRFVNSAFTKITGHSTEVVGQPLHTLYAGYYAAWFYEVIKNGIVESGQWQGRVRWRRKNGSVSVRRTTV
RAVHNQEGNISFYLFLFSGLHETPYAEAMKDDLKLAREVQKRVLSKPLSANGIDIAGTYIPSQELGGDMYAWYQIDNQRY
GIFLMDVMGHGAAASLICMSVRSLLNGIIRKAIVPQAVFYELNRHMRQLYHENGQMTYYFTAVYVLVDVKKRMIEYASAG
HPPGFLFQPDGTVFELDRGCAPIGLLPGLFVDSGQLRYESGATLVLYSDGAIEGEAGSVRQNIETFRDTLAPYVSLDERA
LLACLRRHFIQKGSLRDDFSAVVAKLR

Specific function: Positive regulator of sigma-B activity. Dephosphorylates rsbV in response to energy stress [H]

COG id: COG2208

COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PP2C-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR013767
- InterPro:   IPR001932
- InterPro:   IPR010822 [H]

Pfam domain/function: PF00989 PAS; PF07228 SpoIIE [H]

EC number: =3.1.3.3 [H]

Molecular weight: Translated: 58036; Mature: 58036

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: PS50113 PAC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDEFLEYLRHHKNFTWRELFDRLEKMNMLFGSNDYVYWLAAPDKRKILFISSSCEQLYG
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCHHHHHC
LPPAAFYHDEDIWMKISYPDDHAKAEAKWALPWESKVSTQTYRIVNQRDGSVRWVLERMV
CCCHHEEECCCEEEEEECCCCCCCCCEEEECCCCCCCCCHHEEEECCCCCHHHHHHHHHH
PVLSEAEEGNLISGFVMDITETKRNRDEIRLAEQVYASIEQAMLVTDDEFAVRFVNSAFT
HHHCCCCCCCEEEHHEEEHHHHHCCHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHH
KITGHSTEVVGQPLHTLYAGYYAAWFYEVIKNGIVESGQWQGRVRWRRKNGSVSVRRTTV
HHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEHHHH
RAVHNQEGNISFYLFLFSGLHETPYAEAMKDDLKLAREVQKRVLSKPLSANGIDIAGTYI
HHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
PSQELGGDMYAWYQIDNQRYGIFLMDVMGHGAAASLICMSVRSLLNGIIRKAIVPQAVFY
CHHHCCCCEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELNRHMRQLYHENGQMTYYFTAVYVLVDVKKRMIEYASAGHPPGFLFQPDGTVFELDRGC
HHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEECCCC
APIGLLPGLFVDSGQLRYESGATLVLYSDGAIEGEAGSVRQNIETFRDTLAPYVSLDERA
CCHHCCCCCEECCCCEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHH
LLACLRRHFIQKGSLRDDFSAVVAKLR
HHHHHHHHHHHCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MIDEFLEYLRHHKNFTWRELFDRLEKMNMLFGSNDYVYWLAAPDKRKILFISSSCEQLYG
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCHHHHHC
LPPAAFYHDEDIWMKISYPDDHAKAEAKWALPWESKVSTQTYRIVNQRDGSVRWVLERMV
CCCHHEEECCCEEEEEECCCCCCCCCEEEECCCCCCCCCHHEEEECCCCCHHHHHHHHHH
PVLSEAEEGNLISGFVMDITETKRNRDEIRLAEQVYASIEQAMLVTDDEFAVRFVNSAFT
HHHCCCCCCCEEEHHEEEHHHHHCCHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHH
KITGHSTEVVGQPLHTLYAGYYAAWFYEVIKNGIVESGQWQGRVRWRRKNGSVSVRRTTV
HHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEHHHH
RAVHNQEGNISFYLFLFSGLHETPYAEAMKDDLKLAREVQKRVLSKPLSANGIDIAGTYI
HHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
PSQELGGDMYAWYQIDNQRYGIFLMDVMGHGAAASLICMSVRSLLNGIIRKAIVPQAVFY
CHHHCCCCEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELNRHMRQLYHENGQMTYYFTAVYVLVDVKKRMIEYASAGHPPGFLFQPDGTVFELDRGC
HHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEECCCC
APIGLLPGLFVDSGQLRYESGATLVLYSDGAIEGEAGSVRQNIETFRDTLAPYVSLDERA
CCHHCCCCCEECCCCEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHH
LLACLRRHFIQKGSLRDDFSAVVAKLR
HHHHHHHHHHHCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 10632888 [H]