Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696043
Identifier: 126696043
GI number: 126696043
Start: 628819
End: 629640
Strand: Reverse
Name: 126696043
Synonym: P9301_07051
Alternate gene names: NA
Gene position: 629640-628819 (Counterclockwise)
Preceding gene: 126696044
Following gene: 126696042
Centisome position: 38.35
GC content: 28.95
Gene sequence:
>822_bases ATGAGAAAGATATCGATATTAAATTTATTTATTGGTTATTTTATTCTTCTTGCATGGAATTTTAATAAACCTGTTTATTC ATCAGCAAGAATTTTAAATTGTAATGGTGCTATTCCCCGAAAAACTGCATGCCTTATTAGAGCTAACTCATTTAAAGCAA CAATCAGAAGAATTGATGTGTGTCAAAGTAATCCTTTCCCAAATTATCGAAGCTCTCCCGATTTTAGTGGGGCAAAATGT ATAAATTTATTAAATAGTGAGCTTTCTAGTCAAAATGATCTCAATGAAAATAAGAAATTTTATCTTTCAGAAGATATGAA TATTAAAAAAGGTGGATATAGTTTTATATCAATAATATTTAAGAATAACTTTACTGTTTCTGGTAAGTATAAATCTGGCA ATTATTTTTGGGCTACTAGCAAAGAAGGGCCTACAAAAGTCATCCAATCAAAAAGTAATATATCAATTCCCAAAGAATTT AATACGAAGCTTACTAATTGGAGAGGAGAAAAAAATATCGATAATAAGTATTGCGTAAATAACGGAGGTACTACCTCAAG ATGCGATCTTCAATATAACGGATTTAAAATGACCGGAATAGGAATGGATTCAAACTTTATTGAAGCTTCTGGAAATAGAA CGAAATATATGTTTTTTGTTTCTGAGCTATCTCCAATAGTTAATTTAAATCAAAATGCAGAAGGATATTTCAGTCTAAAT TTAGAGAAAAATTTAGAAGTTTATGGAAACGGATCTGCCGTAACATCAATTTCCATTGCACCTTTTAAATTTAAAACAAG ATATATAAGTGAAGCTCAATAA
Upstream 100 bases:
>100_bases AGAGGTAAATGCATTTGGATTGATCCTAAATTAGGTATAAGATATTAATCATTGTTATTAGACATAATTTTAAAAAGATT CACCTAAAGAACTTTTAATT
Downstream 100 bases:
>100_bases TAAGTTGATTAAAAAAAATCTTCGTAAAAAGAAATTTGAGAGAAAATCATTTTTCGAACAAGGATTTACATTCCTAGAGT TTATTATTGTTGTTTCTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MRKISILNLFIGYFILLAWNFNKPVYSSARILNCNGAIPRKTACLIRANSFKATIRRIDVCQSNPFPNYRSSPDFSGAKC INLLNSELSSQNDLNENKKFYLSEDMNIKKGGYSFISIIFKNNFTVSGKYKSGNYFWATSKEGPTKVIQSKSNISIPKEF NTKLTNWRGEKNIDNKYCVNNGGTTSRCDLQYNGFKMTGIGMDSNFIEASGNRTKYMFFVSELSPIVNLNQNAEGYFSLN LEKNLEVYGNGSAVTSISIAPFKFKTRYISEAQ
Sequences:
>Translated_273_residues MRKISILNLFIGYFILLAWNFNKPVYSSARILNCNGAIPRKTACLIRANSFKATIRRIDVCQSNPFPNYRSSPDFSGAKC INLLNSELSSQNDLNENKKFYLSEDMNIKKGGYSFISIIFKNNFTVSGKYKSGNYFWATSKEGPTKVIQSKSNISIPKEF NTKLTNWRGEKNIDNKYCVNNGGTTSRCDLQYNGFKMTGIGMDSNFIEASGNRTKYMFFVSELSPIVNLNQNAEGYFSLN LEKNLEVYGNGSAVTSISIAPFKFKTRYISEAQ >Mature_273_residues MRKISILNLFIGYFILLAWNFNKPVYSSARILNCNGAIPRKTACLIRANSFKATIRRIDVCQSNPFPNYRSSPDFSGAKC INLLNSELSSQNDLNENKKFYLSEDMNIKKGGYSFISIIFKNNFTVSGKYKSGNYFWATSKEGPTKVIQSKSNISIPKEF NTKLTNWRGEKNIDNKYCVNNGGTTSRCDLQYNGFKMTGIGMDSNFIEASGNRTKYMFFVSELSPIVNLNQNAEGYFSLN LEKNLEVYGNGSAVTSISIAPFKFKTRYISEAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30849; Mature: 30849
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKISILNLFIGYFILLAWNFNKPVYSSARILNCNGAIPRKTACLIRANSFKATIRRIDV CCEEHHHHHHHHHHEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEEECCHHEEHHEEEH CQSNPFPNYRSSPDFSGAKCINLLNSELSSQNDLNENKKFYLSEDMNIKKGGYSFISIIF HCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEECCCCCEEEEEEE KNNFTVSGKYKSGNYFWATSKEGPTKVIQSKSNISIPKEFNTKLTNWRGEKNIDNKYCVN ECCEEEEEEEECCCEEEEECCCCCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEC NGGTTSRCDLQYNGFKMTGIGMDSNFIEASGNRTKYMFFVSELSPIVNLNQNAEGYFSLN CCCCCEEEEEEECCEEEEEECCCCCEEECCCCCEEEEEEEECCCCEEECCCCCCEEEEEE LEKNLEVYGNGSAVTSISIAPFKFKTRYISEAQ EECCEEEEECCCEEEEEEECCEEEEEEECCCCC >Mature Secondary Structure MRKISILNLFIGYFILLAWNFNKPVYSSARILNCNGAIPRKTACLIRANSFKATIRRIDV CCEEHHHHHHHHHHEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEEECCHHEEHHEEEH CQSNPFPNYRSSPDFSGAKCINLLNSELSSQNDLNENKKFYLSEDMNIKKGGYSFISIIF HCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEECCCCCEEEEEEE KNNFTVSGKYKSGNYFWATSKEGPTKVIQSKSNISIPKEFNTKLTNWRGEKNIDNKYCVN ECCEEEEEEEECCCEEEEECCCCCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEC NGGTTSRCDLQYNGFKMTGIGMDSNFIEASGNRTKYMFFVSELSPIVNLNQNAEGYFSLN CCCCCEEEEEEECCEEEEEECCCCCEEECCCCCEEEEEEEECCCCEEECCCCCCEEEEEE LEKNLEVYGNGSAVTSISIAPFKFKTRYISEAQ EECCEEEEECCCEEEEEEECCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA