Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696044
Identifier: 126696044
GI number: 126696044
Start: 629693
End: 630178
Strand: Reverse
Name: 126696044
Synonym: P9301_07061
Alternate gene names: NA
Gene position: 630178-629693 (Counterclockwise)
Preceding gene: 126696045
Following gene: 126696043
Centisome position: 38.38
GC content: 20.78
Gene sequence:
>486_bases TTGAATAGATACAATTCTTCGAAACTAATAAATAAAAATAAATTATGTTTATTTTTTTTATTTTTTATAATTGGATGTTC AAAAAATACTCCAATAGTATTTGAAGATTTTCAAGCTTTAAGATGCGAATTGAATTTCAAAGAAAAAAATTATAATGATT ATGTCTTTAATATAAATACTGGTTTTTTACATTACTATGATGAAATTAAAGATGAGTTTTTACCAATAAGTGAAAGATTA GAATCAGGTATTTTTATCGAAAACAGTAGTGAGATTTTTTCTGTAATTCAAAAAAATAATTTACTGATAACTAAGATTGA ATACTACAAAGACTTAAATAAAAATCAAAAGTTCATCAAAAATCTAAACATAATTAATTTAAAAACATTAACAGCAAGAA GTATATTTAAAAATAAAAATGGCGAATATGTTGTAAAGAGAGGTAAATGCATTTGGATTGATCCTAAATTAGGTATAAGA TATTAA
Upstream 100 bases:
>100_bases CTATAAGAGCACAAAAAAAACTATTAATACTTCAGAAGGAAGGTTGGAATAAAATAAATGAATCATATAAGGTAGCTTAA AATTCTAAATTATTGAAAAA
Downstream 100 bases:
>100_bases TCATTGTTATTAGACATAATTTTAAAAAGATTCACCTAAAGAACTTTTAATTATGAGAAAGATATCGATATTAAATTTAT TTATTGGTTATTTTATTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MNRYNSSKLINKNKLCLFFLFFIIGCSKNTPIVFEDFQALRCELNFKEKNYNDYVFNINTGFLHYYDEIKDEFLPISERL ESGIFIENSSEIFSVIQKNNLLITKIEYYKDLNKNQKFIKNLNIINLKTLTARSIFKNKNGEYVVKRGKCIWIDPKLGIR Y
Sequences:
>Translated_161_residues MNRYNSSKLINKNKLCLFFLFFIIGCSKNTPIVFEDFQALRCELNFKEKNYNDYVFNINTGFLHYYDEIKDEFLPISERL ESGIFIENSSEIFSVIQKNNLLITKIEYYKDLNKNQKFIKNLNIINLKTLTARSIFKNKNGEYVVKRGKCIWIDPKLGIR Y >Mature_161_residues MNRYNSSKLINKNKLCLFFLFFIIGCSKNTPIVFEDFQALRCELNFKEKNYNDYVFNINTGFLHYYDEIKDEFLPISERL ESGIFIENSSEIFSVIQKNNLLITKIEYYKDLNKNQKFIKNLNIINLKTLTARSIFKNKNGEYVVKRGKCIWIDPKLGIR Y
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19199; Mature: 19199
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRYNSSKLINKNKLCLFFLFFIIGCSKNTPIVFEDFQALRCELNFKEKNYNDYVFNINT CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCEEEEEEEEECCCCCCCEEEEECC GFLHYYDEIKDEFLPISERLESGIFIENSSEIFSVIQKNNLLITKIEYYKDLNKNQKFIK CEEEHHHHHHHHCCCHHHHHHCCEEEECCHHHHHHHHCCCEEEEEEHHHHCCCCCHHHHH NLNIINLKTLTARSIFKNKNGEYVVKRGKCIWIDPKLGIRY CCCEEEEEHHHHHHHHHCCCCCEEEECCCEEEECCCCCCCC >Mature Secondary Structure MNRYNSSKLINKNKLCLFFLFFIIGCSKNTPIVFEDFQALRCELNFKEKNYNDYVFNINT CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCEEEEEEEEECCCCCCCEEEEECC GFLHYYDEIKDEFLPISERLESGIFIENSSEIFSVIQKNNLLITKIEYYKDLNKNQKFIK CEEEHHHHHHHHCCCHHHHHHCCEEEECCHHHHHHHHCCCEEEEEEHHHHCCCCCHHHHH NLNIINLKTLTARSIFKNKNGEYVVKRGKCIWIDPKLGIRY CCCEEEEEHHHHHHHHHCCCCCEEEECCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA