Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696042
Identifier: 126696042
GI number: 126696042
Start: 628263
End: 628832
Strand: Reverse
Name: 126696042
Synonym: P9301_07041
Alternate gene names: NA
Gene position: 628832-628263 (Counterclockwise)
Preceding gene: 126696043
Following gene: 126696039
Centisome position: 38.3
GC content: 31.4
Gene sequence:
>570_bases GTGAAGCTCAATAATAAGTTGATTAAAAAAAATCTTCGTAAAAAGAAATTTGAGAGAAAATCATTTTTCGAACAAGGATT TACATTCCTAGAGTTTATTATTGTTGTTTCTCTTCTTGGATTAACTGCGAGACTAATAGTTCCTCCTTTAAAAACATCGT TAAACAAATCAAGGCAAAAAGAAGCAAGTTTAATTGTCAATTCGATGCTCAAATCATCGCAATCATATTATGGCATTTAT GGATTTTTACCAAAAGATATAGGGCAGTTATCTAAATTCGCAAATTTTCAAAAATGTATCGCTAATCAAGCAGAAGAGAA GGGGAATATTGTTTGCAGAAATTCATTGCCAACAAAAGTTGAAAAACAAGATGAAATATTTTTCTCGCCATCAGGAAATT ATAAGGTCGAATTAAGAATTGGTGAAATAGAAAATGAAGGATCAATGTTTCTCGTAAAGGCCAATCCAAATGGTGGTTTA TTTGCGGAAGAAGGAAGTGCAGTAATAGGATGTTACAGTCCGATAAGTGGAATATCTCTTCTAAAAGAATATTCATCAAA AAAAGCTTGA
Upstream 100 bases:
>100_bases TTCAGTCTAAATTTAGAGAAAAATTTAGAAGTTTATGGAAACGGATCTGCCGTAACATCAATTTCCATTGCACCTTTTAA ATTTAAAACAAGATATATAA
Downstream 100 bases:
>100_bases TAGAGGTTCTAAGAATTACATAACTTGTGGAGTTGAAACAAAAATTGCTAGCGCTTCTTGTGAACTATATCCTAATGATC CAAAATGTACAGAGCCTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MKLNNKLIKKNLRKKKFERKSFFEQGFTFLEFIIVVSLLGLTARLIVPPLKTSLNKSRQKEASLIVNSMLKSSQSYYGIY GFLPKDIGQLSKFANFQKCIANQAEEKGNIVCRNSLPTKVEKQDEIFFSPSGNYKVELRIGEIENEGSMFLVKANPNGGL FAEEGSAVIGCYSPISGISLLKEYSSKKA
Sequences:
>Translated_189_residues MKLNNKLIKKNLRKKKFERKSFFEQGFTFLEFIIVVSLLGLTARLIVPPLKTSLNKSRQKEASLIVNSMLKSSQSYYGIY GFLPKDIGQLSKFANFQKCIANQAEEKGNIVCRNSLPTKVEKQDEIFFSPSGNYKVELRIGEIENEGSMFLVKANPNGGL FAEEGSAVIGCYSPISGISLLKEYSSKKA >Mature_189_residues MKLNNKLIKKNLRKKKFERKSFFEQGFTFLEFIIVVSLLGLTARLIVPPLKTSLNKSRQKEASLIVNSMLKSSQSYYGIY GFLPKDIGQLSKFANFQKCIANQAEEKGNIVCRNSLPTKVEKQDEIFFSPSGNYKVELRIGEIENEGSMFLVKANPNGGL FAEEGSAVIGCYSPISGISLLKEYSSKKA
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21163; Mature: 21163
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLNNKLIKKNLRKKKFERKSFFEQGFTFLEFIIVVSLLGLTARLIVPPLKTSLNKSRQK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH EASLIVNSMLKSSQSYYGIYGFLPKDIGQLSKFANFQKCIANQAEEKGNIVCRNSLPTKV HHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC EKQDEIFFSPSGNYKVELRIGEIENEGSMFLVKANPNGGLFAEEGSAVIGCYSPISGISL CCCCCEEECCCCCEEEEEEEECCCCCCCEEEEEECCCCCEEECCCCEEEEECCCHHHHHH LKEYSSKKA HHHHHHCCC >Mature Secondary Structure MKLNNKLIKKNLRKKKFERKSFFEQGFTFLEFIIVVSLLGLTARLIVPPLKTSLNKSRQK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH EASLIVNSMLKSSQSYYGIYGFLPKDIGQLSKFANFQKCIANQAEEKGNIVCRNSLPTKV HHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC EKQDEIFFSPSGNYKVELRIGEIENEGSMFLVKANPNGGLFAEEGSAVIGCYSPISGISL CCCCCEEECCCCCEEEEEEEECCCCCCCEEEEEECCCCCEEECCCCEEEEECCCHHHHHH LKEYSSKKA HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA