The gene/protein map for NC_009089 is currently unavailable.
Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699215

Identifier: 126699215

GI number: 126699215

Start: 1864071

End: 1865339

Strand: Direct

Name: 126699215

Synonym: CD1611

Alternate gene names: NA

Gene position: 1864071-1865339 (Clockwise)

Preceding gene: 126699214

Following gene: 126699216

Centisome position: 43.45

GC content: 22.62

Gene sequence:

>1269_bases
ATGAAAGCAAAAAATATAGGAAAATATACAATATGTTTTATAATAGTATGTTTTTTAATGATTACTATGACCTTAATATT
GAGTTATTTTAATAAGGATAAACTATCTGTAAAAACTTTAAAAGGCAATGTAAAAGATATAGGGAGAGTAAGTGTAGTAT
ATACACCTAATATAAGCAAATTTTCTTATGAGGAGGTAATTATAAGTAAAAATGGAGTAAGAAATAATACAAACCCAAAA
TCAAGAATTAGAAATGATTATTTAAATATTGACAAAAAATACAGTGACTTTGTTAATGATAAAGGAAAAGAATTTATATA
TAAAGATGATTTGAATATAGGAGAAGCGTATACCTCTGTTAAGTCTGATTTAGTACAAGGAATGAATGCTTTAAATGATT
GTATAAAGGTTTCAAATAAAAATTTAAAAAGTGGGGTAGAAGAAAATTTTGATATTAATTTAAATAAGTCTGATTTTAAA
GAAAATAGTTGGAAAACCTTATTTAACAAAATATATAAAGGTAATTTATATATGGTAATTAGTGAAACTAATATTTCAGG
TTCTAAAGTCAATAATATTTGTATATTAAAGATAGATATAAAAAATAAGTCTTATAAATTATTAAATAGATTTAATTTAG
GATTACAGAATGGAGAACAACAAAATATCAATGAAATTAAATTTTCTATTGGAAGTAAATTATACTTAGAAATAGTAAAT
AATAAAAGTAAAAATGGATATATTGAAGGACATGATAGTTACTCTAACTTTATTATATATGATATAGAAGATAACACTTT
TAATATAAGTAATAAATTTATGGATAATCTAAACAAAGAAAAGAATGCAAATCCAAAGGAGATTGGCTTATTAAGTAAAA
CTAAGCTAGATTATATGGTAAAAAACAATAAATTGAATCTTATAGTTACGGATATGAGTAATTCCATAACTAATCTTGTT
TATGATATTAATTCTAATGAGATTAAATTAGAAGATTATGAGATACTTGATTTAAAAGTAGATTATAATGAAGCATCATC
TGGAGTTAGGAAAGTTAAGCTACTGGATGATAAGATATATTCTATTTCAGGTATTAAGAACAGTATATCAGGAGAATTAA
AAGGATTTAAAGGGATTATTGATGTAGTCGGAACTAAGCCAGTAAAATTTCAAGTATTTGATATGAAACTTAAAAAGAAT
ATTTATGAAGCTGAGCTAATAAATGGAGATATAAGTTTACAAGAAAAGTTATTTTTTGTTGCAAATTAA

Upstream 100 bases:

>100_bases
GATGTATTTACTGTTCTATATTCAAGTATAAACATATTTGTATGTAGTCTTATATCTAATAAACTTTTGAAGCAAAAGAT
TGACTTTTAGGAGGGATATT

Downstream 100 bases:

>100_bases
GTGTTAGAATTAATTTTAGAACTTTAAACTTTTATATGTATCACAGATAAGTATAAGTAAGGGAGTGTCTCAAAGTAAAC
TTTTTAGCTCATGAGACACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MKAKNIGKYTICFIIVCFLMITMTLILSYFNKDKLSVKTLKGNVKDIGRVSVVYTPNISKFSYEEVIISKNGVRNNTNPK
SRIRNDYLNIDKKYSDFVNDKGKEFIYKDDLNIGEAYTSVKSDLVQGMNALNDCIKVSNKNLKSGVEENFDINLNKSDFK
ENSWKTLFNKIYKGNLYMVISETNISGSKVNNICILKIDIKNKSYKLLNRFNLGLQNGEQQNINEIKFSIGSKLYLEIVN
NKSKNGYIEGHDSYSNFIIYDIEDNTFNISNKFMDNLNKEKNANPKEIGLLSKTKLDYMVKNNKLNLIVTDMSNSITNLV
YDINSNEIKLEDYEILDLKVDYNEASSGVRKVKLLDDKIYSISGIKNSISGELKGFKGIIDVVGTKPVKFQVFDMKLKKN
IYEAELINGDISLQEKLFFVAN

Sequences:

>Translated_422_residues
MKAKNIGKYTICFIIVCFLMITMTLILSYFNKDKLSVKTLKGNVKDIGRVSVVYTPNISKFSYEEVIISKNGVRNNTNPK
SRIRNDYLNIDKKYSDFVNDKGKEFIYKDDLNIGEAYTSVKSDLVQGMNALNDCIKVSNKNLKSGVEENFDINLNKSDFK
ENSWKTLFNKIYKGNLYMVISETNISGSKVNNICILKIDIKNKSYKLLNRFNLGLQNGEQQNINEIKFSIGSKLYLEIVN
NKSKNGYIEGHDSYSNFIIYDIEDNTFNISNKFMDNLNKEKNANPKEIGLLSKTKLDYMVKNNKLNLIVTDMSNSITNLV
YDINSNEIKLEDYEILDLKVDYNEASSGVRKVKLLDDKIYSISGIKNSISGELKGFKGIIDVVGTKPVKFQVFDMKLKKN
IYEAELINGDISLQEKLFFVAN
>Mature_422_residues
MKAKNIGKYTICFIIVCFLMITMTLILSYFNKDKLSVKTLKGNVKDIGRVSVVYTPNISKFSYEEVIISKNGVRNNTNPK
SRIRNDYLNIDKKYSDFVNDKGKEFIYKDDLNIGEAYTSVKSDLVQGMNALNDCIKVSNKNLKSGVEENFDINLNKSDFK
ENSWKTLFNKIYKGNLYMVISETNISGSKVNNICILKIDIKNKSYKLLNRFNLGLQNGEQQNINEIKFSIGSKLYLEIVN
NKSKNGYIEGHDSYSNFIIYDIEDNTFNISNKFMDNLNKEKNANPKEIGLLSKTKLDYMVKNNKLNLIVTDMSNSITNLV
YDINSNEIKLEDYEILDLKVDYNEASSGVRKVKLLDDKIYSISGIKNSISGELKGFKGIIDVVGTKPVKFQVFDMKLKKN
IYEAELINGDISLQEKLFFVAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48239; Mature: 48239

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAKNIGKYTICFIIVCFLMITMTLILSYFNKDKLSVKTLKGNVKDIGRVSVVYTPNISK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCC
FSYEEVIISKNGVRNNTNPKSRIRNDYLNIDKKYSDFVNDKGKEFIYKDDLNIGEAYTSV
CCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHH
KSDLVQGMNALNDCIKVSNKNLKSGVEENFDINLNKSDFKENSWKTLFNKIYKGNLYMVI
HHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEECCHHHCCCCHHHHHHHHHHCCCEEEEE
SETNISGSKVNNICILKIDIKNKSYKLLNRFNLGLQNGEQQNINEIKFSIGSKLYLEIVN
EECCCCCCCCCCEEEEEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEEEEEEC
NKSKNGYIEGHDSYSNFIIYDIEDNTFNISNKFMDNLNKEKNANPKEIGLLSKTKLDYMV
CCCCCCEEECCCCCCCEEEEEECCCEEECHHHHHHCCCCCCCCCHHHCCEEECCCEEEEE
KNNKLNLIVTDMSNSITNLVYDINSNEIKLEDYEILDLKVDYNEASSGVRKVKLLDDKIY
ECCEEEEEEECCCCCCEEEEEECCCCEEEEECEEEEEEEEECCCCCCCCEEEEEECCCEE
SISGIKNSISGELKGFKGIIDVVGTKPVKFQVFDMKLKKNIYEAELINGDISLQEKLFFV
EECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEHHHCCCEEEEEECCCCEEEEEEEEE
AN
EC
>Mature Secondary Structure
MKAKNIGKYTICFIIVCFLMITMTLILSYFNKDKLSVKTLKGNVKDIGRVSVVYTPNISK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCC
FSYEEVIISKNGVRNNTNPKSRIRNDYLNIDKKYSDFVNDKGKEFIYKDDLNIGEAYTSV
CCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHH
KSDLVQGMNALNDCIKVSNKNLKSGVEENFDINLNKSDFKENSWKTLFNKIYKGNLYMVI
HHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEECCHHHCCCCHHHHHHHHHHCCCEEEEE
SETNISGSKVNNICILKIDIKNKSYKLLNRFNLGLQNGEQQNINEIKFSIGSKLYLEIVN
EECCCCCCCCCCEEEEEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEEEEEEC
NKSKNGYIEGHDSYSNFIIYDIEDNTFNISNKFMDNLNKEKNANPKEIGLLSKTKLDYMV
CCCCCCEEECCCCCCCEEEEEECCCEEECHHHHHHCCCCCCCCCHHHCCEEECCCEEEEE
KNNKLNLIVTDMSNSITNLVYDINSNEIKLEDYEILDLKVDYNEASSGVRKVKLLDDKIY
ECCEEEEEEECCCCCCEEEEEECCCCEEEEECEEEEEEEEECCCCCCCCEEEEEECCCEE
SISGIKNSISGELKGFKGIIDVVGTKPVKFQVFDMKLKKNIYEAELINGDISLQEKLFFV
EECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEHHHCCCEEEEEECCCCEEEEEEEEE
AN
EC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA