Definition | Clostridium difficile 630 chromosome, complete genome. |
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Accession | NC_009089 |
Length | 4,290,252 |
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The map label for this gene is 126699214
Identifier: 126699214
GI number: 126699214
Start: 1863245
End: 1864060
Strand: Direct
Name: 126699214
Synonym: CD1610
Alternate gene names: NA
Gene position: 1863245-1864060 (Clockwise)
Preceding gene: 126699213
Following gene: 126699215
Centisome position: 43.43
GC content: 22.55
Gene sequence:
>816_bases TTGATGAAAGATTTAATAAGATTATTCGAATTTGAATTAAAAAGAAATATAAAGAATTATATATTTATAATAATTTGTTG TTGTTCTTTTGTAATTTTAAACATAGTAAAAAATTTAAATGACTATAATTACATAATAGAAAATGCAGTTAAAAGTGAAC AGTTAACAAAAATCGGAAATACGATAGAAACGGTAAATGTTACAGGTTTCTCAAGCTTTAGAAATATAATGGGTTCTACA GAATCGTGGTTTATGTTTGGTATAATTGCATGTATTTGCTATGCTTTTTTTATTTGGTATAGAGACTTTAATGGTAGAAG TAAATCTATATATACACTTATAATGCTACCTAAAAATAGAATCAATATTTATATATCTAAATTATTAAATATATTATTTC TAGTGTATAGCTATACAGTAGTACTTACAATATCTTTGTTTATTGCAAGTAAGTTGTTGCCTAGACATATGCTTGGTAAT GTCACAAACTATGGTTTTGTACAAGAAACAATATATGAGTTAAAAATGTTACTTCCATATAGCTTTGAAATACTATTTGT AGAGTATATATTTTTATTGATAGGATTTGTATCTGTAGTATTTACATCAATTCTTATAAATAAATCTATTTATAAAGTAA GCACTTTAATAAGTTTTCTATTTTTAGTTATAGAAATTTTAGTGTTTATAATTTCTATAGAATTTATTATACCTTACGAA TACAGTGATGTATTTACTGTTCTATATTCAAGTATAAACATATTTGTATGTAGTCTTATATCTAATAAACTTTTGAAGCA AAAGATTGACTTTTAG
Upstream 100 bases:
>100_bases TATATATAATAAATAAAAATTCTAAGGAAATTGTATATGAAGGAGAATTACAATTTAACAGTTCAAATAGTATGTTAGAA TTTGAAATAAAGTAGGTGAG
Downstream 100 bases:
>100_bases GAGGGATATTATGAAAGCAAAAAATATAGGAAAATATACAATATGTTTTATAATAGTATGTTTTTTAATGATTACTATGA CCTTAATATTGAGTTATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MMKDLIRLFEFELKRNIKNYIFIIICCCSFVILNIVKNLNDYNYIIENAVKSEQLTKIGNTIETVNVTGFSSFRNIMGST ESWFMFGIIACICYAFFIWYRDFNGRSKSIYTLIMLPKNRINIYISKLLNILFLVYSYTVVLTISLFIASKLLPRHMLGN VTNYGFVQETIYELKMLLPYSFEILFVEYIFLLIGFVSVVFTSILINKSIYKVSTLISFLFLVIEILVFIISIEFIIPYE YSDVFTVLYSSINIFVCSLISNKLLKQKIDF
Sequences:
>Translated_271_residues MMKDLIRLFEFELKRNIKNYIFIIICCCSFVILNIVKNLNDYNYIIENAVKSEQLTKIGNTIETVNVTGFSSFRNIMGST ESWFMFGIIACICYAFFIWYRDFNGRSKSIYTLIMLPKNRINIYISKLLNILFLVYSYTVVLTISLFIASKLLPRHMLGN VTNYGFVQETIYELKMLLPYSFEILFVEYIFLLIGFVSVVFTSILINKSIYKVSTLISFLFLVIEILVFIISIEFIIPYE YSDVFTVLYSSINIFVCSLISNKLLKQKIDF >Mature_271_residues MMKDLIRLFEFELKRNIKNYIFIIICCCSFVILNIVKNLNDYNYIIENAVKSEQLTKIGNTIETVNVTGFSSFRNIMGST ESWFMFGIIACICYAFFIWYRDFNGRSKSIYTLIMLPKNRINIYISKLLNILFLVYSYTVVLTISLFIASKLLPRHMLGN VTNYGFVQETIYELKMLLPYSFEILFVEYIFLLIGFVSVVFTSILINKSIYKVSTLISFLFLVIEILVFIISIEFIIPYE YSDVFTVLYSSINIFVCSLISNKLLKQKIDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31732; Mature: 31732
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKDLIRLFEFELKRNIKNYIFIIICCCSFVILNIVKNLNDYNYIIENAVKSEQLTKIGN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC TIETVNVTGFSSFRNIMGSTESWFMFGIIACICYAFFIWYRDFNGRSKSIYTLIMLPKNR CHHEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCH INIYISKLLNILFLVYSYTVVLTISLFIASKLLPRHMLGNVTNYGFVQETIYELKMLLPY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC SFEILFVEYIFLLIGFVSVVFTSILINKSIYKVSTLISFLFLVIEILVFIISIEFIIPYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC YSDVFTVLYSSINIFVCSLISNKLLKQKIDF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMKDLIRLFEFELKRNIKNYIFIIICCCSFVILNIVKNLNDYNYIIENAVKSEQLTKIGN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC TIETVNVTGFSSFRNIMGSTESWFMFGIIACICYAFFIWYRDFNGRSKSIYTLIMLPKNR CHHEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCH INIYISKLLNILFLVYSYTVVLTISLFIASKLLPRHMLGNVTNYGFVQETIYELKMLLPY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC SFEILFVEYIFLLIGFVSVVFTSILINKSIYKVSTLISFLFLVIEILVFIISIEFIIPYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC YSDVFTVLYSSINIFVCSLISNKLLKQKIDF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA