Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699216

Identifier: 126699216

GI number: 126699216

Start: 1865705

End: 1866886

Strand: Direct

Name: 126699216

Synonym: CD1612

Alternate gene names: NA

Gene position: 1865705-1866886 (Clockwise)

Preceding gene: 126699215

Following gene: 126699218

Centisome position: 43.49

GC content: 32.83

Gene sequence:

>1182_bases
ATGAACAAAAAATATATTAAAGCAGGGAATTTAATTGATGGAACCGGAAATAGTATTATGCAAAATAAGGGTATAATTAT
TGATGGAGATACTATAGTTGAAATTGAAGATATAAGAGATGATTTAAATGGATATGATGTGTACGATTACTTAGATAAAA
CTGTTATGCCAGGCATTATGAATTGTCATGTTCACTTGACAATGGAGCCAGTTGGAAATCCAAAGATATATTATGATAAT
GTATCAGATGTAGAGCTTGTAGTAAATACGATAAAACAACTTGATGCTTATTTGGATTCAGGAGTAACATATATTAGAAG
CTTAGGTTGTCCCAAATATGTGGATGTACAACTTAAAAATCTTATAGACAAAGGGTCTATAGATGGTCCTGGTATAGTTA
CTTCAGGTCCAGTTATATGTATGACAGGAGGGCATGGATATTATTTTGGTATTGAAAGTGATGGAGTGGATGAATGTAGA
AAATCAGCCAGAACAGTTTTAAAAAATGGAGTAGATTGTGTAAAGATAATGGCAACTGGAGGTGTAACAACTGATGGAGT
TGAGCCAGGGTCACCACAATTAACTTTGGAGGAAATGAAGGCTGCTGTAGATGAAGCTATAAAAGCAGGTAAAATAACTG
CCACACATGCACAAGGAAGAACTGGTATAAAAAATGCAGTGCTTGCAGGAATTACTTCTATAGAACATGGTGTTTATTTA
GATGATGAAATAATTGATTTGATGCTTGAAAGAGGAACTTACTTAGTTCCAACTGTGGCTGCACCATATTTTATTCTAAA
TGCAGGAAAAGAAAGTGGAATAACTGAAGCTACTCTTAGAAAGTGTGAGATTGTTGCCATTCCACACAAAGAGTCATTCC
TAAAAGCATATAAAAAAGGAATTAAAATTGCAGTTGGTTCTGATGCAGGAACTTCTTATAATGAACATGGAAAAACATAT
TATGAAATGAAACTAATGTCAGATTATGGTATGGATAATATGGATATAATAGTTGCTGCTACAAAAACAGCATCTGAACT
TTTAAGAATTGATAAAAATTATGGAACTCTAGAAAAAGGAAAGAAAGCAGATGTTATAGTTGTAAATGGAAATCCAGTAG
AGAATATAGACGTACTTGCAGATGTGTTAGCAGTATTTAAACTTGGTAAAAAAGTTAGATAA

Upstream 100 bases:

>100_bases
AAATTTGAAATAGAATGCTTATAGTGGTAAAATTAATTATTAGAATATTAGAAATAATAAATAAATAATACATTGTACTT
AAAAGGGGGAGAAATTTAAG

Downstream 100 bases:

>100_bases
ATAGTATAAAAATAAAAAAGAGTGTCTAAAGAAATTTTTAAATAATTATAGACACTCTTTTTTATTAGTAATAATTAAAT
CTTTTATACTTTAGAAAATA

Product: amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MNKKYIKAGNLIDGTGNSIMQNKGIIIDGDTIVEIEDIRDDLNGYDVYDYLDKTVMPGIMNCHVHLTMEPVGNPKIYYDN
VSDVELVVNTIKQLDAYLDSGVTYIRSLGCPKYVDVQLKNLIDKGSIDGPGIVTSGPVICMTGGHGYYFGIESDGVDECR
KSARTVLKNGVDCVKIMATGGVTTDGVEPGSPQLTLEEMKAAVDEAIKAGKITATHAQGRTGIKNAVLAGITSIEHGVYL
DDEIIDLMLERGTYLVPTVAAPYFILNAGKESGITEATLRKCEIVAIPHKESFLKAYKKGIKIAVGSDAGTSYNEHGKTY
YEMKLMSDYGMDNMDIIVAATKTASELLRIDKNYGTLEKGKKADVIVVNGNPVENIDVLADVLAVFKLGKKVR

Sequences:

>Translated_393_residues
MNKKYIKAGNLIDGTGNSIMQNKGIIIDGDTIVEIEDIRDDLNGYDVYDYLDKTVMPGIMNCHVHLTMEPVGNPKIYYDN
VSDVELVVNTIKQLDAYLDSGVTYIRSLGCPKYVDVQLKNLIDKGSIDGPGIVTSGPVICMTGGHGYYFGIESDGVDECR
KSARTVLKNGVDCVKIMATGGVTTDGVEPGSPQLTLEEMKAAVDEAIKAGKITATHAQGRTGIKNAVLAGITSIEHGVYL
DDEIIDLMLERGTYLVPTVAAPYFILNAGKESGITEATLRKCEIVAIPHKESFLKAYKKGIKIAVGSDAGTSYNEHGKTY
YEMKLMSDYGMDNMDIIVAATKTASELLRIDKNYGTLEKGKKADVIVVNGNPVENIDVLADVLAVFKLGKKVR
>Mature_393_residues
MNKKYIKAGNLIDGTGNSIMQNKGIIIDGDTIVEIEDIRDDLNGYDVYDYLDKTVMPGIMNCHVHLTMEPVGNPKIYYDN
VSDVELVVNTIKQLDAYLDSGVTYIRSLGCPKYVDVQLKNLIDKGSIDGPGIVTSGPVICMTGGHGYYFGIESDGVDECR
KSARTVLKNGVDCVKIMATGGVTTDGVEPGSPQLTLEEMKAAVDEAIKAGKITATHAQGRTGIKNAVLAGITSIEHGVYL
DDEIIDLMLERGTYLVPTVAAPYFILNAGKESGITEATLRKCEIVAIPHKESFLKAYKKGIKIAVGSDAGTSYNEHGKTY
YEMKLMSDYGMDNMDIIVAATKTASELLRIDKNYGTLEKGKKADVIVVNGNPVENIDVLADVLAVFKLGKKVR

Specific function: Unknown

COG id: COG1228

COG function: function code Q; Imidazolonepropionase and related amidohydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To S.coelicolor SCO1861 [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322248, Length=322, Percent_Identity=31.055900621118, Blast_Score=122, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006680 [H]

Pfam domain/function: PF01979 Amidohydro_1 [H]

EC number: NA

Molecular weight: Translated: 42549; Mature: 42549

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKYIKAGNLIDGTGNSIMQNKGIIIDGDTIVEIEDIRDDLNGYDVYDYLDKTVMPGIM
CCCCEEECCCEECCCCCCCCCCCCEEECCCEEEEEEHHHHCCCCCCHHHHHHHHHCCCEE
NCHVHLTMEPVGNPKIYYDNVSDVELVVNTIKQLDAYLDSGVTYIRSLGCPKYVDVQLKN
EEEEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEHHHHHH
LIDKGSIDGPGIVTSGPVICMTGGHGYYFGIESDGVDECRKSARTVLKNGVDCVKIMATG
HHHCCCCCCCCEEECCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECC
GVTTDGVEPGSPQLTLEEMKAAVDEAIKAGKITATHAQGRTGIKNAVLAGITSIEHGVYL
CCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEE
DDEIIDLMLERGTYLVPTVAAPYFILNAGKESGITEATLRKCEIVAIPHKESFLKAYKKG
CHHHHHHHHHCCCEEEEHHHCCEEEEECCCCCCCCHHHHCEEEEEEECCHHHHHHHHHCC
IKIAVGSDAGTSYNEHGKTYYEMKLMSDYGMDNMDIIVAATKTASELLRIDKNYGTLEKG
CEEEECCCCCCCCCCCCCEEEEEEEEHHCCCCCCEEEEEECHHHHHHHHHCCCCCCCCCC
KKADVIVVNGNPVENIDVLADVLAVFKLGKKVR
CCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNKKYIKAGNLIDGTGNSIMQNKGIIIDGDTIVEIEDIRDDLNGYDVYDYLDKTVMPGIM
CCCCEEECCCEECCCCCCCCCCCCEEECCCEEEEEEHHHHCCCCCCHHHHHHHHHCCCEE
NCHVHLTMEPVGNPKIYYDNVSDVELVVNTIKQLDAYLDSGVTYIRSLGCPKYVDVQLKN
EEEEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEHHHHHH
LIDKGSIDGPGIVTSGPVICMTGGHGYYFGIESDGVDECRKSARTVLKNGVDCVKIMATG
HHHCCCCCCCCEEECCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECC
GVTTDGVEPGSPQLTLEEMKAAVDEAIKAGKITATHAQGRTGIKNAVLAGITSIEHGVYL
CCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEE
DDEIIDLMLERGTYLVPTVAAPYFILNAGKESGITEATLRKCEIVAIPHKESFLKAYKKG
CHHHHHHHHHCCCEEEEHHHCCEEEEECCCCCCCCHHHHCEEEEEEECCHHHHHHHHHCC
IKIAVGSDAGTSYNEHGKTYYEMKLMSDYGMDNMDIIVAATKTASELLRIDKNYGTLEKG
CEEEECCCCCCCCCCCCCEEEEEEEEHHCCCCCCEEEEEECHHHHHHHHHCCCCCCCCCC
KKADVIVVNGNPVENIDVLADVLAVFKLGKKVR
CCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]