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The map label for this gene is ydaL [H]

Identifier: 126698613

GI number: 126698613

Start: 1200530

End: 1202212

Strand: Direct

Name: ydaL [H]

Synonym: CD1029

Alternate gene names: 126698613

Gene position: 1200530-1202212 (Clockwise)

Preceding gene: 126698612

Following gene: 126698614

Centisome position: 27.98

GC content: 24.3

Gene sequence:

>1683_bases
TTGAAGAGGAACTTCAATATGATGTTTAAAATATTTAATAAAAGTCTATTAAAATTAGTAGTTGTATTATCAATAGTACT
GACAATATCAAATTTTAGCTTATCTTCATATGCATCAGAAATTACTTCCAGCACAGATAAGGTATTAATCATATATGATT
CTAAGAAAGAAACAGCTTATAATAGAGATATTTTAAATATTATGAGGACTCTATTGGGAAGATTTAGTTCAGATATAGAG
CTATTAAAATTGAGTAACTATGATGGTGAGATAAATAAAAATTATTACAGTCATATATTTATTTTAGGAATCAATGAAAA
CTCATATAATAATGATAAAAACACTAAAAACTTGATTAGTTCCTTAAATTCATATAAAGGAACTATATGTTGGTTAGGAT
ATGGTATAGAAAATCTTTTGGAACATAAAAAATACAATTTAGACTATGTAGGAAAAACAAACAATATAGTTAGTGTAAAT
TATAGAGGTAAATCATATAACTTGGATGAACATTATGTTTTTAACATTGTAGAATCAAAAGATACAAGTAATAAAGTAAT
AGGAAGTATTAATGATACCTTAAATAAGTATCCATATATAATAAATGATAAAAATCTTTTTTATGTATCAAAATTAGATT
TAGATGGAGTTTTATTTTATATATTTTGCGATTCACTTAATGATATTTTTAATATTAAGACGTTTGATAAAGGACGTATA
TTTGTAAGAATAGAAGATGTACATGCTTTTAGAGAACCAAAAAATCTTGTAGAGATAGCGGATTATTTAAGTAGTAAGAA
TATACCATTTACGATTGCATTAATACCAGCATATGTAAATCCTAAAAATCATAAGGTAATAACTTTATCAGAAAGCCCTG
AAATTGTCAAAGCAATAAAATATATGCAAGATAAAGGTGGAACTGTGATATTGCATGGATATACTCATCAATACAAGAAA
GAAGAAGTTTCTGGAGAAGGGTATGAATTTTGGGATGGTAAAAAAGATGAACCCTTAAAAGAAAATATGAAGATATTTGT
CAAAGATAGAGTTTTGAATGGTCTTAGAGTATGTATAGAGAATGGAATTTATCCTCTTGCATTTGAAGCGCCACATTATG
CAATGGAATCAGAGGGATATAAAGAATTAAAAAAATATTTTTCTACTTATATGGGGCAACATCAAAATAATGATAAAAAA
TTTAGCACAAATACATATCCTTATATTATTAGGGATACAGAAGAGTTTAATATATTTATACCCGAAAATTTAGGATATAT
AGACCCAGAAGATAAGTTTACTTTTCAAAATATAAAAGAAAATTTAGATAAATTATCCATTGTAAGAGGTTTTAGTGGAG
GGTTCTTCTTTCATTCATATTTAAACATAGAGTATCTAAAAAACACAATAGAATATTTAGAAAAACAGAATATAGAATTT
ATGAATTTAAGAGATTTTAATAATTGGGTAAAAGTTGATGAAATACAAATAAGAAATAGTGGAGATGAAATTATAGTCAA
CTATGATAAGGACTTAGATGAAATAACTAAAAGTGATACTAGATTTAAATCCATATCCAATATTAGTAAAGTTTTAATAT
TCATAGTATCTATAAGTGTTTTAATATTTGTGATTATATTTATATATTTTAAGAGAATAGATAAAAAGAAATTTTTAAAA
TAA

Upstream 100 bases:

>100_bases
GATTTAAACAATAGGGGAAAATATGTAAATATAGATGTCAAAATTGCATTTTTACAATATAAGAGTAGTTTTGGAGATAG
TATAAATTTTAAGAATATAG

Downstream 100 bases:

>100_bases
AGGATTTTATATTAGAATCAATATTTTAAAATATTTTAGGAGAAATTTATGAGAGATTTAAATGTATCAGAGTATTTGTT
CGTATTTAGTTTGTTTAGTA

Product: cell wall anchored protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 560; Mature: 560

Protein sequence:

>560_residues
MKRNFNMMFKIFNKSLLKLVVVLSIVLTISNFSLSSYASEITSSTDKVLIIYDSKKETAYNRDILNIMRTLLGRFSSDIE
LLKLSNYDGEINKNYYSHIFILGINENSYNNDKNTKNLISSLNSYKGTICWLGYGIENLLEHKKYNLDYVGKTNNIVSVN
YRGKSYNLDEHYVFNIVESKDTSNKVIGSINDTLNKYPYIINDKNLFYVSKLDLDGVLFYIFCDSLNDIFNIKTFDKGRI
FVRIEDVHAFREPKNLVEIADYLSSKNIPFTIALIPAYVNPKNHKVITLSESPEIVKAIKYMQDKGGTVILHGYTHQYKK
EEVSGEGYEFWDGKKDEPLKENMKIFVKDRVLNGLRVCIENGIYPLAFEAPHYAMESEGYKELKKYFSTYMGQHQNNDKK
FSTNTYPYIIRDTEEFNIFIPENLGYIDPEDKFTFQNIKENLDKLSIVRGFSGGFFFHSYLNIEYLKNTIEYLEKQNIEF
MNLRDFNNWVKVDEIQIRNSGDEIIVNYDKDLDEITKSDTRFKSISNISKVLIFIVSISVLIFVIIFIYFKRIDKKKFLK

Sequences:

>Translated_560_residues
MKRNFNMMFKIFNKSLLKLVVVLSIVLTISNFSLSSYASEITSSTDKVLIIYDSKKETAYNRDILNIMRTLLGRFSSDIE
LLKLSNYDGEINKNYYSHIFILGINENSYNNDKNTKNLISSLNSYKGTICWLGYGIENLLEHKKYNLDYVGKTNNIVSVN
YRGKSYNLDEHYVFNIVESKDTSNKVIGSINDTLNKYPYIINDKNLFYVSKLDLDGVLFYIFCDSLNDIFNIKTFDKGRI
FVRIEDVHAFREPKNLVEIADYLSSKNIPFTIALIPAYVNPKNHKVITLSESPEIVKAIKYMQDKGGTVILHGYTHQYKK
EEVSGEGYEFWDGKKDEPLKENMKIFVKDRVLNGLRVCIENGIYPLAFEAPHYAMESEGYKELKKYFSTYMGQHQNNDKK
FSTNTYPYIIRDTEEFNIFIPENLGYIDPEDKFTFQNIKENLDKLSIVRGFSGGFFFHSYLNIEYLKNTIEYLEKQNIEF
MNLRDFNNWVKVDEIQIRNSGDEIIVNYDKDLDEITKSDTRFKSISNISKVLIFIVSISVLIFVIIFIYFKRIDKKKFLK
>Mature_560_residues
MKRNFNMMFKIFNKSLLKLVVVLSIVLTISNFSLSSYASEITSSTDKVLIIYDSKKETAYNRDILNIMRTLLGRFSSDIE
LLKLSNYDGEINKNYYSHIFILGINENSYNNDKNTKNLISSLNSYKGTICWLGYGIENLLEHKKYNLDYVGKTNNIVSVN
YRGKSYNLDEHYVFNIVESKDTSNKVIGSINDTLNKYPYIINDKNLFYVSKLDLDGVLFYIFCDSLNDIFNIKTFDKGRI
FVRIEDVHAFREPKNLVEIADYLSSKNIPFTIALIPAYVNPKNHKVITLSESPEIVKAIKYMQDKGGTVILHGYTHQYKK
EEVSGEGYEFWDGKKDEPLKENMKIFVKDRVLNGLRVCIENGIYPLAFEAPHYAMESEGYKELKKYFSTYMGQHQNNDKK
FSTNTYPYIIRDTEEFNIFIPENLGYIDPEDKFTFQNIKENLDKLSIVRGFSGGFFFHSYLNIEYLKNTIEYLEKQNIEF
MNLRDFNNWVKVDEIQIRNSGDEIIVNYDKDLDEITKSDTRFKSISNISKVLIFIVSISVLIFVIIFIYFKRIDKKKFLK

Specific function: Unknown

COG id: COG5298

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass type I membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018763 [H]

Pfam domain/function: PF10096 DUF2334 [H]

EC number: NA

Molecular weight: Translated: 65492; Mature: 65492

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRNFNMMFKIFNKSLLKLVVVLSIVLTISNFSLSSYASEITSSTDKVLIIYDSKKETAY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCCCHH
NRDILNIMRTLLGRFSSDIELLKLSNYDGEINKNYYSHIFILGINENSYNNDKNTKNLIS
HHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHH
SLNSYKGTICWLGYGIENLLEHKKYNLDYVGKTNNIVSVNYRGKSYNLDEHYVFNIVESK
HHHCCCCEEEEEECCHHHHHHHHCCCCEEECCCCCEEEEEECCCCCCCCCCEEEEEEECC
DTSNKVIGSINDTLNKYPYIINDKNLFYVSKLDLDGVLFYIFCDSLNDIFNIKTFDKGRI
CCCCCEEECHHHHHHHCCEEECCCCEEEEEEECCCCEEEEEEECCCCHHEEEEEECCCEE
FVRIEDVHAFREPKNLVEIADYLSSKNIPFTIALIPAYVNPKNHKVITLSESPEIVKAIK
EEEEECHHHHHCCHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCEEEEECCCCHHHHHHH
YMQDKGGTVILHGYTHQYKKEEVSGEGYEFWDGKKDEPLKENMKIFVKDRVLNGLRVCIE
HHHCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHCCEEEEHHHHHHHHHHHHH
NGIYPLAFEAPHYAMESEGYKELKKYFSTYMGQHQNNDKKFSTNTYPYIIRDTEEFNIFI
CCCEEEEECCCCCHHCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCEEEECCCEEEEEE
PENLGYIDPEDKFTFQNIKENLDKLSIVRGFSGGFFFHSYLNIEYLKNTIEYLEKQNIEF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCEE
MNLRDFNNWVKVDEIQIRNSGDEIIVNYDKDLDEITKSDTRFKSISNISKVLIFIVSISV
EEECCCCCCEEEEEEEEECCCCEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LIFVIIFIYFKRIDKKKFLK
HHHHHHHHHHHHHCHHHCCC
>Mature Secondary Structure
MKRNFNMMFKIFNKSLLKLVVVLSIVLTISNFSLSSYASEITSSTDKVLIIYDSKKETAY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCCCHH
NRDILNIMRTLLGRFSSDIELLKLSNYDGEINKNYYSHIFILGINENSYNNDKNTKNLIS
HHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHH
SLNSYKGTICWLGYGIENLLEHKKYNLDYVGKTNNIVSVNYRGKSYNLDEHYVFNIVESK
HHHCCCCEEEEEECCHHHHHHHHCCCCEEECCCCCEEEEEECCCCCCCCCCEEEEEEECC
DTSNKVIGSINDTLNKYPYIINDKNLFYVSKLDLDGVLFYIFCDSLNDIFNIKTFDKGRI
CCCCCEEECHHHHHHHCCEEECCCCEEEEEEECCCCEEEEEEECCCCHHEEEEEECCCEE
FVRIEDVHAFREPKNLVEIADYLSSKNIPFTIALIPAYVNPKNHKVITLSESPEIVKAIK
EEEEECHHHHHCCHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCEEEEECCCCHHHHHHH
YMQDKGGTVILHGYTHQYKKEEVSGEGYEFWDGKKDEPLKENMKIFVKDRVLNGLRVCIE
HHHCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHCCEEEEHHHHHHHHHHHHH
NGIYPLAFEAPHYAMESEGYKELKKYFSTYMGQHQNNDKKFSTNTYPYIIRDTEEFNIFI
CCCEEEEECCCCCHHCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCEEEECCCEEEEEE
PENLGYIDPEDKFTFQNIKENLDKLSIVRGFSGGFFFHSYLNIEYLKNTIEYLEKQNIEF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCEE
MNLRDFNNWVKVDEIQIRNSGDEIIVNYDKDLDEITKSDTRFKSISNISKVLIFIVSISV
EEECCCCCCEEEEEEEEECCCCEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LIFVIIFIYFKRIDKKKFLK
HHHHHHHHHHHHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]