Click here to switch to the map view.

The map label for this gene is ydaM [H]

Identifier: 126698614

GI number: 126698614

Start: 1202261

End: 1203517

Strand: Direct

Name: ydaM [H]

Synonym: CD1030

Alternate gene names: 126698614

Gene position: 1202261-1203517 (Clockwise)

Preceding gene: 126698613

Following gene: 126698615

Centisome position: 28.02

GC content: 26.57

Gene sequence:

>1257_bases
ATGAGAGATTTAAATGTATCAGAGTATTTGTTCGTATTTAGTTTGTTTAGTATATGGTCTTTATTGCTTATAAATATTAT
TTTAGCTATGGGTGGATATATATTTTATTTTAAAAACTTTGATAAAGAAATAAAAGAAATTGATGAATATCCTATGATAT
CAATACTTGTTCCTGCTCATAATGAAGCTAAAGTGATAGGTAGAACTGTGGAGTCTTTGCTATTACTTAATTATCCTAAG
AGTAAGATGGAACTTATTGTTATAAATGACAATTCTTCTGATAATAGTAAAGAAATTTTAGAAAATATAAAGGATAGGTA
CAACAATTATAATTTCACTATAATAAATACAGATAGTTTAACAGGTGGAAAAGGAAAGTCTAATGCATTAAATATTGGAT
ATACGATTTCAAAAGGAGATTTTATAGCTGTTTATGATGCAGATAACACACCAGATAAAAATGCACTTAGATATCTAGTA
CAAACTATAGTAATGAATGATGAATTAGGTGCTGTTATTGGGAAATTTAGGACTCGAAATAAAAATAAAAACCTATTAAC
CAAATTTATAAACATAGAAACATTAAGCTTTCAATGGATGTCACAAGCTGGTAGATGGCAACTTTTTAATCTATGTACAA
TACCAGGAACTAACTTTATATTGAGGAGAAGTATCATAGAAGAAATTGGAGGATGGGATAGTAAAGCAATTGCAGAAGAT
ACAGAAATAAGTTTTAGGATATATAAATTGGGATACAAGATAAAGCTTGTACCACAATCTATAACATGGGAACAAGAGCC
AGAAACTGTTAAGGTGTGGATAAAGCAACGTACTAGATGGGCAAAAGGGAATATATATGTATTAATGAAATATATAAAAA
ATATATTTAAACAGGGAAGAAATAAGATTGTGTTTGATATAGCTTACTTTTTTTCTGTATATTTTCTATTTTTAACATCT
GTAATTATATCTGATATTTTATTTGTTTTAAGTATATCTAAACTAGTAGAAATTTCTATTCCAATTAACTTTTTTCTAAT
ATGGATACTATCTTATCTTTTATTTATTATAGAAGTGAGTATAAGCCTTACTATAGAAAAAGGTGAAGCAACAATTGAAA
ATATATTCATAGTGGCAATAATGTATTTTACATACTCTCAACTATGGCTGTTTGTAGCTATAAAAGGAATGATAGAGTAT
CTAAAAGATATAATTTTTAAAAGAGAGGTTAAATGGTATAAAACAGAAAGATTTTGA

Upstream 100 bases:

>100_bases
GATTATATTTATATATTTTAAGAGAATAGATAAAAAGAAATTTTTAAAATAAAGGATTTTATATTAGAATCAATATTTTA
AAATATTTTAGGAGAAATTT

Downstream 100 bases:

>100_bases
TTCATGTACAGGAGGAATTAACATGAAAAAATTTATTATATCAATTATATCTTTAGTATTGTTTTTTTCAAATATATCAC
TTATATACAAAGTAAATGCT

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MRDLNVSEYLFVFSLFSIWSLLLINIILAMGGYIFYFKNFDKEIKEIDEYPMISILVPAHNEAKVIGRTVESLLLLNYPK
SKMELIVINDNSSDNSKEILENIKDRYNNYNFTIINTDSLTGGKGKSNALNIGYTISKGDFIAVYDADNTPDKNALRYLV
QTIVMNDELGAVIGKFRTRNKNKNLLTKFINIETLSFQWMSQAGRWQLFNLCTIPGTNFILRRSIIEEIGGWDSKAIAED
TEISFRIYKLGYKIKLVPQSITWEQEPETVKVWIKQRTRWAKGNIYVLMKYIKNIFKQGRNKIVFDIAYFFSVYFLFLTS
VIISDILFVLSISKLVEISIPINFFLIWILSYLLFIIEVSISLTIEKGEATIENIFIVAIMYFTYSQLWLFVAIKGMIEY
LKDIIFKREVKWYKTERF

Sequences:

>Translated_418_residues
MRDLNVSEYLFVFSLFSIWSLLLINIILAMGGYIFYFKNFDKEIKEIDEYPMISILVPAHNEAKVIGRTVESLLLLNYPK
SKMELIVINDNSSDNSKEILENIKDRYNNYNFTIINTDSLTGGKGKSNALNIGYTISKGDFIAVYDADNTPDKNALRYLV
QTIVMNDELGAVIGKFRTRNKNKNLLTKFINIETLSFQWMSQAGRWQLFNLCTIPGTNFILRRSIIEEIGGWDSKAIAED
TEISFRIYKLGYKIKLVPQSITWEQEPETVKVWIKQRTRWAKGNIYVLMKYIKNIFKQGRNKIVFDIAYFFSVYFLFLTS
VIISDILFVLSISKLVEISIPINFFLIWILSYLLFIIEVSISLTIEKGEATIENIFIVAIMYFTYSQLWLFVAIKGMIEY
LKDIIFKREVKWYKTERF
>Mature_418_residues
MRDLNVSEYLFVFSLFSIWSLLLINIILAMGGYIFYFKNFDKEIKEIDEYPMISILVPAHNEAKVIGRTVESLLLLNYPK
SKMELIVINDNSSDNSKEILENIKDRYNNYNFTIINTDSLTGGKGKSNALNIGYTISKGDFIAVYDADNTPDKNALRYLV
QTIVMNDELGAVIGKFRTRNKNKNLLTKFINIETLSFQWMSQAGRWQLFNLCTIPGTNFILRRSIIEEIGGWDSKAIAED
TEISFRIYKLGYKIKLVPQSITWEQEPETVKVWIKQRTRWAKGNIYVLMKYIKNIFKQGRNKIVFDIAYFFSVYFLFLTS
VIISDILFVLSISKLVEISIPINFFLIWILSYLLFIIEVSISLTIEKGEATIENIFIVAIMYFTYSQLWLFVAIKGMIEY
LKDIIFKREVKWYKTERF

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=334, Percent_Identity=25.4491017964072, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI87082284, Length=329, Percent_Identity=22.4924012158055, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 48829; Mature: 48829

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDLNVSEYLFVFSLFSIWSLLLINIILAMGGYIFYFKNFDKEIKEIDEYPMISILVPAH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCEEEEEECCC
NEAKVIGRTVESLLLLNYPKSKMELIVINDNSSDNSKEILENIKDRYNNYNFTIINTDSL
CCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCC
TGGKGKSNALNIGYTISKGDFIAVYDADNTPDKNALRYLVQTIVMNDELGAVIGKFRTRN
CCCCCCCCEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCC
KNKNLLTKFINIETLSFQWMSQAGRWQLFNLCTIPGTNFILRRSIIEEIGGWDSKAIAED
CCHHHHHHHEEEEEEEHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCC
TEISFRIYKLGYKIKLVPQSITWEQEPETVKVWIKQRTRWAKGNIYVLMKYIKNIFKQGR
CCEEEEEEEECEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
NKIVFDIAYFFSVYFLFLTSVIISDILFVLSISKLVEISIPINFFLIWILSYLLFIIEVS
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHEE
ISLTIEKGEATIENIFIVAIMYFTYSQLWLFVAIKGMIEYLKDIIFKREVKWYKTERF
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRDLNVSEYLFVFSLFSIWSLLLINIILAMGGYIFYFKNFDKEIKEIDEYPMISILVPAH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCEEEEEECCC
NEAKVIGRTVESLLLLNYPKSKMELIVINDNSSDNSKEILENIKDRYNNYNFTIINTDSL
CCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCC
TGGKGKSNALNIGYTISKGDFIAVYDADNTPDKNALRYLVQTIVMNDELGAVIGKFRTRN
CCCCCCCCEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCC
KNKNLLTKFINIETLSFQWMSQAGRWQLFNLCTIPGTNFILRRSIIEEIGGWDSKAIAED
CCHHHHHHHEEEEEEEHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCC
TEISFRIYKLGYKIKLVPQSITWEQEPETVKVWIKQRTRWAKGNIYVLMKYIKNIFKQGR
CCEEEEEEEECEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
NKIVFDIAYFFSVYFLFLTSVIISDILFVLSISKLVEISIPINFFLIWILSYLLFIIEVS
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHEE
ISLTIEKGEATIENIFIVAIMYFTYSQLWLFVAIKGMIEYLKDIIFKREVKWYKTERF
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]