Click here to switch to the map view.

The map label for this gene is 126698568

Identifier: 126698568

GI number: 126698568

Start: 1147604

End: 1148068

Strand: Direct

Name: 126698568

Synonym: CD0984

Alternate gene names: NA

Gene position: 1147604-1148068 (Clockwise)

Preceding gene: 126698567

Following gene: 126698569

Centisome position: 26.75

GC content: 31.61

Gene sequence:

>465_bases
ATGTCACTTAGAATAGGAGGGAATAGTTTGGGATATTTACACATATTAATTTTATCTATGGTTCCTGTAACAGAATTGAG
GGGAGCCATTCCTATAGGTATTGCAATGGGCTTAAATCCTATATGGGTTTATGTATTTAGTGTAATAGGTTCTACATTGG
TATCGATTCCCTTGATATTGACATTCAGACATGTATTACAATTTTTAAGAGGGAAGAAACTATTTAAAGGGATTGCTGAT
GTAATTGATAGAAAAATAAACTCAAGAATGAAGAAATTAAAAAGTGTTTCGATAATTGGTATAATACTATTTGTAGGTAT
ACCACTGCCAACTACAGGAACATGGACTGCATCTGCTATAGCTTCCATATTAAAAATGAGAATAAAAGATGCTTTTATGG
GAGTATTTCTTGGCAATTTGTTATCAGGGGTTATAGTTTCAGCTCTTTCTTTACATATAATATAA

Upstream 100 bases:

>100_bases
GACTCTAAGAGTGATTTACCAATGCTTTCATTGACTAAAAATGCATTTTTAGTTAGTAAAAAGGATGGTGAGGTTATAGA
GCAAATAAATTCATAACTTA

Downstream 100 bases:

>100_bases
AACTATCTAAGTAATATACTTGGATAGTTTTTTTATGAGTATGTGTGAAAAATTTTTAATAATAAATAAAAAATGAGATA
AAGTATTTAACTTCAGTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: Small Multi-Drug Export Protein; Small Multidrug Export Protein; Smr Small Multidrug Efflux Protein; Small Multidrug Export Protein QacE; Small Multi-Drug Export Family Transporter; Small Multi-Drug Exporter; Small-Multidrug Export Protein; PHP Domain-Containing Protein

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MSLRIGGNSLGYLHILILSMVPVTELRGAIPIGIAMGLNPIWVYVFSVIGSTLVSIPLILTFRHVLQFLRGKKLFKGIAD
VIDRKINSRMKKLKSVSIIGIILFVGIPLPTTGTWTASAIASILKMRIKDAFMGVFLGNLLSGVIVSALSLHII

Sequences:

>Translated_154_residues
MSLRIGGNSLGYLHILILSMVPVTELRGAIPIGIAMGLNPIWVYVFSVIGSTLVSIPLILTFRHVLQFLRGKKLFKGIAD
VIDRKINSRMKKLKSVSIIGIILFVGIPLPTTGTWTASAIASILKMRIKDAFMGVFLGNLLSGVIVSALSLHII
>Mature_153_residues
SLRIGGNSLGYLHILILSMVPVTELRGAIPIGIAMGLNPIWVYVFSVIGSTLVSIPLILTFRHVLQFLRGKKLFKGIADV
IDRKINSRMKKLKSVSIIGIILFVGIPLPTTGTWTASAIASILKMRIKDAFMGVFLGNLLSGVIVSALSLHII

Specific function: Unknown

COG id: COG2426

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16680; Mature: 16549

Theoretical pI: Translated: 11.72; Mature: 11.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRIGGNSLGYLHILILSMVPVTELRGAIPIGIAMGLNPIWVYVFSVIGSTLVSIPLIL
CEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
TFRHVLQFLRGKKLFKGIADVIDRKINSRMKKLKSVSIIGIILFVGIPLPTTGTWTASAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
ASILKMRIKDAFMGVFLGNLLSGVIVSALSLHII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLRIGGNSLGYLHILILSMVPVTELRGAIPIGIAMGLNPIWVYVFSVIGSTLVSIPLIL
EEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
TFRHVLQFLRGKKLFKGIADVIDRKINSRMKKLKSVSIIGIILFVGIPLPTTGTWTASAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
ASILKMRIKDAFMGVFLGNLLSGVIVSALSLHII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA