Definition | Clostridium difficile 630 chromosome, complete genome. |
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Accession | NC_009089 |
Length | 4,290,252 |
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The map label for this gene is 126698567
Identifier: 126698567
GI number: 126698567
Start: 1146970
End: 1147599
Strand: Direct
Name: 126698567
Synonym: CD0983
Alternate gene names: NA
Gene position: 1146970-1147599 (Clockwise)
Preceding gene: 126698566
Following gene: 126698568
Centisome position: 26.73
GC content: 24.44
Gene sequence:
>630_bases ATGAAAAAAAGTGTATTATTACTTGATGTAGATTATACTGTTATAAATACTGATAGCATGATAGATTTTTTTATTTACTC TTTAAAAAATAAAACCTTTAAAACTATTATAAAGTTACCATACATTATTTTTATTCTATTTATGTATTTAATTAGAATGA TACCTTTGAAGAAGGCAAAAGAGGCAATCTTTTATCCAATAGTAGATTTTAGTGAAGAAGATTTAAAAAAGTTTTTTGAT GATTGCATAATGAAAAAAATTAACGAATCTATGAAAAAGGTTATTTACAAAAATAAAGAAGAAGATAATGTTATAATTAT GATAACTGCATCTCCATATGCATATATGAAATATTTTAAGTATTATGGTCTTGCAGACGAGGTTATAGGCACGGAGTTTT TTTATGAAAATTCAAGATATAAAAATAAATTCATTGGAGAAAACTGTAAGGGAATTGAAAAAGTAAAAAGAATAAAGGCT GTATTAGGTAAACTTGGGATAGAGATTGATTATGAAAATTCATATGCATATTCAGACTCTAAGAGTGATTTACCAATGCT TTCATTGACTAAAAATGCATTTTTAGTTAGTAAAAAGGATGGTGAGGTTATAGAGCAAATAAATTCATAA
Upstream 100 bases:
>100_bases AGATAATGCTTTAAAAATAAACGTAATCTTATGGATAATTACATGTTTAATAATATTGATTTTTTAGTGATATTTTTAGT GATAGGATGGGGAAATACTT
Downstream 100 bases:
>100_bases CTTAATGTCACTTAGAATAGGAGGGAATAGTTTGGGATATTTACACATATTAATTTTATCTATGGTTCCTGTAACAGAAT TGAGGGGAGCCATTCCTATA
Product: hydrolase
Products: NA
Alternate protein names: HAD Family Hydrolase; HAD-Superfamily Subfamily IB Hydrolase TIGR; Phosphoserine Phosphatase; Hydrolase; HAD-Superfamily Hydrolase Subfamily IB; HAD-Superfamily Hydrolase; Phosphoserine Phosphatase-Like Protein; Phosphoserine Phosphatase Family Protein; HAD Hydrolase Family IB
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MKKSVLLLDVDYTVINTDSMIDFFIYSLKNKTFKTIIKLPYIIFILFMYLIRMIPLKKAKEAIFYPIVDFSEEDLKKFFD DCIMKKINESMKKVIYKNKEEDNVIIMITASPYAYMKYFKYYGLADEVIGTEFFYENSRYKNKFIGENCKGIEKVKRIKA VLGKLGIEIDYENSYAYSDSKSDLPMLSLTKNAFLVSKKDGEVIEQINS
Sequences:
>Translated_209_residues MKKSVLLLDVDYTVINTDSMIDFFIYSLKNKTFKTIIKLPYIIFILFMYLIRMIPLKKAKEAIFYPIVDFSEEDLKKFFD DCIMKKINESMKKVIYKNKEEDNVIIMITASPYAYMKYFKYYGLADEVIGTEFFYENSRYKNKFIGENCKGIEKVKRIKA VLGKLGIEIDYENSYAYSDSKSDLPMLSLTKNAFLVSKKDGEVIEQINS >Mature_209_residues MKKSVLLLDVDYTVINTDSMIDFFIYSLKNKTFKTIIKLPYIIFILFMYLIRMIPLKKAKEAIFYPIVDFSEEDLKKFFD DCIMKKINESMKKVIYKNKEEDNVIIMITASPYAYMKYFKYYGLADEVIGTEFFYENSRYKNKFIGENCKGIEKVKRIKA VLGKLGIEIDYENSYAYSDSKSDLPMLSLTKNAFLVSKKDGEVIEQINS
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24545; Mature: 24545
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSVLLLDVDYTVINTDSMIDFFIYSLKNKTFKTIIKLPYIIFILFMYLIRMIPLKKAK CCCCEEEEECCEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH EAIFYPIVDFSEEDLKKFFDDCIMKKINESMKKVIYKNKEEDNVIIMITASPYAYMKYFK HHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHH YYGLADEVIGTEFFYENSRYKNKFIGENCKGIEKVKRIKAVLGKLGIEIDYENSYAYSDS HHCCHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCEEEECCCEEECCC KSDLPMLSLTKNAFLVSKKDGEVIEQINS CCCCCEEEECCCEEEEECCCCHHHHHHCC >Mature Secondary Structure MKKSVLLLDVDYTVINTDSMIDFFIYSLKNKTFKTIIKLPYIIFILFMYLIRMIPLKKAK CCCCEEEEECCEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH EAIFYPIVDFSEEDLKKFFDDCIMKKINESMKKVIYKNKEEDNVIIMITASPYAYMKYFK HHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHH YYGLADEVIGTEFFYENSRYKNKFIGENCKGIEKVKRIKAVLGKLGIEIDYENSYAYSDS HHCCHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCEEEECCCEEECCC KSDLPMLSLTKNAFLVSKKDGEVIEQINS CCCCCEEEECCCEEEEECCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA