The gene/protein map for NC_009089 is currently unavailable.
Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698566

Identifier: 126698566

GI number: 126698566

Start: 1146049

End: 1146936

Strand: Direct

Name: 126698566

Synonym: CD0982

Alternate gene names: NA

Gene position: 1146049-1146936 (Clockwise)

Preceding gene: 126698565

Following gene: 126698567

Centisome position: 26.71

GC content: 25.0

Gene sequence:

>888_bases
ATGAAACAGACCAATACAAGTATAAGGCTTCTTACTAAAATTTCAGATTATATAAAGTTAATGAGAATAAAGCAATATAT
AAAGAATTTCTTTGTATTTTCAGCTATAATTTTTTCAAACAACATACTAAATATAAATTTATTTTTAAATACGTTTATTG
CGTTTGTGTGTTTTTGCCTAATGTCATCATCAGTATATGCACTGAATGATGCTATAGACATGGATAAAGATAAAAAACAT
CCTAAAAAATGTAATAGACCAGTGGCAAGTGGAAGAATAAGCAAAAAAAGTGCTAATATACTATTTGTAGTATTAGCTTT
AACTTCAGTCTGTTTATCAACAGTTGTTAGTTTTAATCTTTCTATAATTCTCAGTCTCTATTTGATAAACAATATATTAT
ATTCTCTTAAACTAAAGAATATAATACTATTAGATGTGTTTTCAATATCTCTTGGTTTTATACTTAGGGTTTATGCAGGA
TGTGTAGCCATAAGTGTTAGTTTATCAAATTGGATAATTTTATGTACATTTTTCTTATCTCTGTACTTAGCTCTTGGAAA
ACGTAAAAAAGAAATAGAAACTCTAAGAGATGATGCAGTTGAACATAGAAAAATATTGGAAGATTATGACATAGAAAATC
TAAATCAAATGATGATAGTTATATTAAGTTCTACAATTGTATGTTATGCATTGTATTCTACAAGTAATCCAGAAAAGCCA
CATATGATATTTACAACAATATTTGTAGTTTATGGTGTACTTAGATATAATTATATAATTAACACTACAAATGAAAATAA
TCCTACTGATATTGTCCTAAAAGATAATGCTTTAAAAATAAACGTAATCTTATGGATAATTACATGTTTAATAATATTGA
TTTTTTAG

Upstream 100 bases:

>100_bases
ACTATAGTAATCAGTAATGTCAATGGATTTATAGAAATTTTAAACATAGGGATAAAATCATATCCTGTTTAAAAAATAAT
ATTGAAAGGGTAGTAAGTTT

Downstream 100 bases:

>100_bases
TGATATTTTTAGTGATAGGATGGGGAAATACTTATGAAAAAAAGTGTATTATTACTTGATGTAGATTATACTGTTATAAA
TACTGATAGCATGATAGATT

Product: phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MKQTNTSIRLLTKISDYIKLMRIKQYIKNFFVFSAIIFSNNILNINLFLNTFIAFVCFCLMSSSVYALNDAIDMDKDKKH
PKKCNRPVASGRISKKSANILFVVLALTSVCLSTVVSFNLSIILSLYLINNILYSLKLKNIILLDVFSISLGFILRVYAG
CVAISVSLSNWIILCTFFLSLYLALGKRKKEIETLRDDAVEHRKILEDYDIENLNQMMIVILSSTIVCYALYSTSNPEKP
HMIFTTIFVVYGVLRYNYIINTTNENNPTDIVLKDNALKINVILWIITCLIILIF

Sequences:

>Translated_295_residues
MKQTNTSIRLLTKISDYIKLMRIKQYIKNFFVFSAIIFSNNILNINLFLNTFIAFVCFCLMSSSVYALNDAIDMDKDKKH
PKKCNRPVASGRISKKSANILFVVLALTSVCLSTVVSFNLSIILSLYLINNILYSLKLKNIILLDVFSISLGFILRVYAG
CVAISVSLSNWIILCTFFLSLYLALGKRKKEIETLRDDAVEHRKILEDYDIENLNQMMIVILSSTIVCYALYSTSNPEKP
HMIFTTIFVVYGVLRYNYIINTTNENNPTDIVLKDNALKINVILWIITCLIILIF
>Mature_295_residues
MKQTNTSIRLLTKISDYIKLMRIKQYIKNFFVFSAIIFSNNILNINLFLNTFIAFVCFCLMSSSVYALNDAIDMDKDKKH
PKKCNRPVASGRISKKSANILFVVLALTSVCLSTVVSFNLSIILSLYLINNILYSLKLKNIILLDVFSISLGFILRVYAG
CVAISVSLSNWIILCTFFLSLYLALGKRKKEIETLRDDAVEHRKILEDYDIENLNQMMIVILSSTIVCYALYSTSNPEKP
HMIFTTIFVVYGVLRYNYIINTTNENNPTDIVLKDNALKINVILWIITCLIILIF

Specific function: Possible permease/transporter [H]

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR000537 [H]

Pfam domain/function: PF01040 UbiA [H]

EC number: NA

Molecular weight: Translated: 33726; Mature: 33726

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQTNTSIRLLTKISDYIKLMRIKQYIKNFFVFSAIIFSNNILNINLFLNTFIAFVCFCL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHH
MSSSVYALNDAIDMDKDKKHPKKCNRPVASGRISKKSANILFVVLALTSVCLSTVVSFNL
HCCCCEEEHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SIILSLYLINNILYSLKLKNIILLDVFSISLGFILRVYAGCVAISVSLSNWIILCTFFLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHH
LYLALGKRKKEIETLRDDAVEHRKILEDYDIENLNQMMIVILSSTIVCYALYSTSNPEKP
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCC
HMIFTTIFVVYGVLRYNYIINTTNENNPTDIVLKDNALKINVILWIITCLIILIF
HHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEECCCEEHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKQTNTSIRLLTKISDYIKLMRIKQYIKNFFVFSAIIFSNNILNINLFLNTFIAFVCFCL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHH
MSSSVYALNDAIDMDKDKKHPKKCNRPVASGRISKKSANILFVVLALTSVCLSTVVSFNL
HCCCCEEEHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SIILSLYLINNILYSLKLKNIILLDVFSISLGFILRVYAGCVAISVSLSNWIILCTFFLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHH
LYLALGKRKKEIETLRDDAVEHRKILEDYDIENLNQMMIVILSSTIVCYALYSTSNPEKP
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCC
HMIFTTIFVVYGVLRYNYIINTTNENNPTDIVLKDNALKINVILWIITCLIILIF
HHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEECCCEEHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]