The gene/protein map for NC_009089 is currently unavailable.
Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

Click here to switch to the map view.

The map label for this gene is 126698564

Identifier: 126698564

GI number: 126698564

Start: 1143302

End: 1143688

Strand: Direct

Name: 126698564

Synonym: CD0979

Alternate gene names: NA

Gene position: 1143302-1143688 (Clockwise)

Preceding gene: 126698563

Following gene: 126698565

Centisome position: 26.65

GC content: 25.06

Gene sequence:

>387_bases
ATGCTAAATAAAAAATTACCAGATTCAGAGTTCAAGATTATGAAATACATATGGAATACTGGTTATAAAACTGTAATATC
AAAAGATGTGGCAGATGAAATGGAAAAAATATATAAATGGAAACAAACTACAACACTAACACTTTTATTAAGGTTAACTA
AAAGAGGTTTTTTAGCTTCTCAAAAAATAGGTAAACACACACATTATACAATATTAATAAAAGAAAAAGAATACTTAAAA
TCAGAAACTAAAAAACTATTTGGAGGTTTACATAATAATCCTTTATCACAGTTAATATCAAAATTACATGATAAAGAAGA
GGTAAGTATTGATAAAATAGATGCGCTTGAAAAATGGTTAAGAAGTTTGCAAGAAGATGAAGAATAA

Upstream 100 bases:

>100_bases
AAAGACAGAGAAACAAATAAAAGTATTTATAGAAAGTATGCAGAAACTAGGAAAAAAATAATTTTATATTTTTATATGTT
AATAGAAAGAAGGGGATATT

Downstream 100 bases:

>100_bases
GAATATGCCAAAAGGTAGCACTCAATAGTAGCTACCTTTTTGTGGATAAAGCTGGGGATAAACTGTGGAAAAGTTATATA
AAAATTGTGGATAAAATGTT

Product: phage regulatory protein

Products: NA

Alternate protein names: Beta-Lactamase Repressor; Transcriptional Repressor CopY Family; Phage Regulatory Protein; Transcriptional Repressor

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MLNKKLPDSEFKIMKYIWNTGYKTVISKDVADEMEKIYKWKQTTTLTLLLRLTKRGFLASQKIGKHTHYTILIKEKEYLK
SETKKLFGGLHNNPLSQLISKLHDKEEVSIDKIDALEKWLRSLQEDEE

Sequences:

>Translated_128_residues
MLNKKLPDSEFKIMKYIWNTGYKTVISKDVADEMEKIYKWKQTTTLTLLLRLTKRGFLASQKIGKHTHYTILIKEKEYLK
SETKKLFGGLHNNPLSQLISKLHDKEEVSIDKIDALEKWLRSLQEDEE
>Mature_128_residues
MLNKKLPDSEFKIMKYIWNTGYKTVISKDVADEMEKIYKWKQTTTLTLLLRLTKRGFLASQKIGKHTHYTILIKEKEYLK
SETKKLFGGLHNNPLSQLISKLHDKEEVSIDKIDALEKWLRSLQEDEE

Specific function: Unknown

COG id: COG3682

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15127; Mature: 15127

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKKLPDSEFKIMKYIWNTGYKTVISKDVADEMEKIYKWKQTTTLTLLLRLTKRGFLAS
CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKIGKHTHYTILIKEKEYLKSETKKLFGGLHNNPLSQLISKLHDKEEVSIDKIDALEKWL
HHHCCCCEEEEEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHCCCHHHHHHHHHHH
RSLQEDEE
HHHHCCCC
>Mature Secondary Structure
MLNKKLPDSEFKIMKYIWNTGYKTVISKDVADEMEKIYKWKQTTTLTLLLRLTKRGFLAS
CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKIGKHTHYTILIKEKEYLKSETKKLFGGLHNNPLSQLISKLHDKEEVSIDKIDALEKWL
HHHCCCCEEEEEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHCCCHHHHHHHHHHH
RSLQEDEE
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA