Definition | Clostridium difficile 630 chromosome, complete genome. |
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Accession | NC_009089 |
Length | 4,290,252 |
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The map label for this gene is 126698563
Identifier: 126698563
GI number: 126698563
Start: 1142981
End: 1143262
Strand: Direct
Name: 126698563
Synonym: CD0978
Alternate gene names: NA
Gene position: 1142981-1143262 (Clockwise)
Preceding gene: 126698562
Following gene: 126698564
Centisome position: 26.64
GC content: 22.34
Gene sequence:
>282_bases ATGAAAGAAAAGTATAAGTGGAGAAAAAGCACTACAGAGATTTTACTTGGAAGATTAGTAAAAATGAGAATATTAAAAAA GAAGAGAGTTGGTTTTCAATTAAACTATGAAGTATTAGTAACTAAAAAAGAATATTTAGATGTAATAAAAGAAGAAAAAG ATGTAAGTAAATATGATAATTTTTTTACACAAGTATTTACAACTATACATAAAAAAGAAGAAAAGACAGAGAAACAAATA AAAGTATTTATAGAAAGTATGCAGAAACTAGGAAAAAAATAA
Upstream 100 bases:
>100_bases ACAAGAGGTAGAAAGTAAATTACGCAGGGGCGAATTAATGTTGATGGAGTACATGTGAAGGGAAAAGTCTACTCTATCTA AAAAAGAAATAGAAGTAGCA
Downstream 100 bases:
>100_bases TTTTATATTTTTATATGTTAATAGAAAGAAGGGGATATTATGCTAAATAAAAAATTACCAGATTCAGAGTTCAAGATTAT GAAATACATATGGAATACTG
Product: phage regulatory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MKEKYKWRKSTTEILLGRLVKMRILKKKRVGFQLNYEVLVTKKEYLDVIKEEKDVSKYDNFFTQVFTTIHKKEEKTEKQI KVFIESMQKLGKK
Sequences:
>Translated_93_residues MKEKYKWRKSTTEILLGRLVKMRILKKKRVGFQLNYEVLVTKKEYLDVIKEEKDVSKYDNFFTQVFTTIHKKEEKTEKQI KVFIESMQKLGKK >Mature_93_residues MKEKYKWRKSTTEILLGRLVKMRILKKKRVGFQLNYEVLVTKKEYLDVIKEEKDVSKYDNFFTQVFTTIHKKEEKTEKQI KVFIESMQKLGKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11335; Mature: 11335
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKYKWRKSTTEILLGRLVKMRILKKKRVGFQLNYEVLVTKKEYLDVIKEEKDVSKYDN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHEEEEHHHHHHHHHHHHHHHHHHH FFTQVFTTIHKKEEKTEKQIKVFIESMQKLGKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKEKYKWRKSTTEILLGRLVKMRILKKKRVGFQLNYEVLVTKKEYLDVIKEEKDVSKYDN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHEEEEHHHHHHHHHHHHHHHHHHH FFTQVFTTIHKKEEKTEKQIKVFIESMQKLGKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA