Definition | Clostridium difficile 630 chromosome, complete genome. |
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Accession | NC_009089 |
Length | 4,290,252 |
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The map label for this gene is 126698562
Identifier: 126698562
GI number: 126698562
Start: 1142224
End: 1142367
Strand: Direct
Name: 126698562
Synonym: CD0977A
Alternate gene names: NA
Gene position: 1142224-1142367 (Clockwise)
Preceding gene: 126698561
Following gene: 126698563
Centisome position: 26.62
GC content: 31.94
Gene sequence:
>144_bases ATGAGCGAATTTTTACTAGGAGTGTTAGCTAGTTTAACAGCTAGCTTTATTACATATATTATTTCCAGAAAAGTAAAAAG CCACTCTGGCAGGAGTGACTTTGAGCTTGATGTGAAAATCAAGCTTAATAAAAAACAACATTAA
Upstream 100 bases:
>100_bases TTATAATTAAAATGCAAGAATATATCTTGTAAGAAACTACAATCCAAGAGTGGAGCTTCATTTTCTACATTCCATCCCTT AAAAGGAAGGAGGTGGAGAA
Downstream 100 bases:
>100_bases TATTTAGTTAATGAAACTTCACTCTAGGCTAATAGATTGTAGTTTCTTTTTTTGTTTTTGATACGAATTTACATCTTTAT TATATCGCATTTTGAGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 47; Mature: 46
Protein sequence:
>47_residues MSEFLLGVLASLTASFITYIISRKVKSHSGRSDFELDVKIKLNKKQH
Sequences:
>Translated_47_residues MSEFLLGVLASLTASFITYIISRKVKSHSGRSDFELDVKIKLNKKQH >Mature_46_residues SEFLLGVLASLTASFITYIISRKVKSHSGRSDFELDVKIKLNKKQH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5337; Mature: 5206
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEFLLGVLASLTASFITYIISRKVKSHSGRSDFELDVKIKLNKKQH CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCC >Mature Secondary Structure SEFLLGVLASLTASFITYIISRKVKSHSGRSDFELDVKIKLNKKQH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA