Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698561

Identifier: 126698561

GI number: 126698561

Start: 1140823

End: 1141527

Strand: Direct

Name: 126698561

Synonym: CD0977

Alternate gene names: NA

Gene position: 1140823-1141527 (Clockwise)

Preceding gene: 126698560

Following gene: 126698562

Centisome position: 26.59

GC content: 27.66

Gene sequence:

>705_bases
ATGAGATTGAAATTTAAATCTAAAGAGAGTACTAGCAGGGAAAAACATCAGTCAGCAGAATCTCTAGCAAAGTTTATGTT
AAACAATAAATCGTTCTTAGGTATAACACTGTCAATATTAGATGAATGGAAAAATAATATTGATAGTAGTAAAATTGAGG
ATATTGTAAAAAATAATTTTAGATTTGAGGAATCTATAATTAAAGATAAGAACTATAAAGAGTTTATAAAATTATTAAAC
TCATTTTATAACGGAACAGAAGATGAGTTAAACGGTAGAAGAGGAAGATTTTTAGAGTTGATTTGGGATGTTGTAGGAAC
ATATAACGGAAAAGAATTTACACAAAAAATAGATGAGGCCATAGTGTTAGAAAATGAAGTGAAAATATCAGAAAAAGATA
TAGATATTGTCTATATAGGCGAAATTAAAGATAAAGGGATAGCAAATTTTATTGAAATGCACGAATGTAAAGCATCAGCA
AACACAACACTAAGAACTCCATTAAAACCAAAACATAGAGGAAAACTAGAACTGATGCAATCAGTAATTGAAATATCAGA
AACAGAAGAAATTAAATGTGATGGATTAATAATTACATTCAATGCTAACAAAAGAAGGCTTGAAAGAAAGCTAAAAAGCT
ATGGATTTGAATACTTTAAAATAATTCCTAGAGCAGAAATAGAGGAAAGAGTGTTTAATAAGTAA

Upstream 100 bases:

>100_bases
GTTCCAGTTAATATATGGCCTTATGCAAGAGAGATAATAAGTTCCATCACAACTCGTATTGGATATCCTGCTCTAGTAAT
TTCTCCATATAAGGCATAAT

Downstream 100 bases:

>100_bases
TTTACACTAATTTATACAAATTAATAGATACTAAAAGTACTCTTTTTGTAAGAGTGCTATTTTTTTGAAATTTATTAACA
TATAAACTATCAAGAACCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MRLKFKSKESTSREKHQSAESLAKFMLNNKSFLGITLSILDEWKNNIDSSKIEDIVKNNFRFEESIIKDKNYKEFIKLLN
SFYNGTEDELNGRRGRFLELIWDVVGTYNGKEFTQKIDEAIVLENEVKISEKDIDIVYIGEIKDKGIANFIEMHECKASA
NTTLRTPLKPKHRGKLELMQSVIEISETEEIKCDGLIITFNANKRRLERKLKSYGFEYFKIIPRAEIEERVFNK

Sequences:

>Translated_234_residues
MRLKFKSKESTSREKHQSAESLAKFMLNNKSFLGITLSILDEWKNNIDSSKIEDIVKNNFRFEESIIKDKNYKEFIKLLN
SFYNGTEDELNGRRGRFLELIWDVVGTYNGKEFTQKIDEAIVLENEVKISEKDIDIVYIGEIKDKGIANFIEMHECKASA
NTTLRTPLKPKHRGKLELMQSVIEISETEEIKCDGLIITFNANKRRLERKLKSYGFEYFKIIPRAEIEERVFNK
>Mature_234_residues
MRLKFKSKESTSREKHQSAESLAKFMLNNKSFLGITLSILDEWKNNIDSSKIEDIVKNNFRFEESIIKDKNYKEFIKLLN
SFYNGTEDELNGRRGRFLELIWDVVGTYNGKEFTQKIDEAIVLENEVKISEKDIDIVYIGEIKDKGIANFIEMHECKASA
NTTLRTPLKPKHRGKLELMQSVIEISETEEIKCDGLIITFNANKRRLERKLKSYGFEYFKIIPRAEIEERVFNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27432; Mature: 27432

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKFKSKESTSREKHQSAESLAKFMLNNKSFLGITLSILDEWKNNIDSSKIEDIVKNNF
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
RFEESIIKDKNYKEFIKLLNSFYNGTEDELNGRRGRFLELIWDVVGTYNGKEFTQKIDEA
CHHHHHHCCCCHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
IVLENEVKISEKDIDIVYIGEIKDKGIANFIEMHECKASANTTLRTPLKPKHRGKLELMQ
HHCCCCCEECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHH
SVIEISETEEIKCDGLIITFNANKRRLERKLKSYGFEYFKIIPRAEIEERVFNK
HHHHHCCCCCEEECCEEEEECCCHHHHHHHHHHCCCHHHHCCCCHHHHHHHCCC
>Mature Secondary Structure
MRLKFKSKESTSREKHQSAESLAKFMLNNKSFLGITLSILDEWKNNIDSSKIEDIVKNNF
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
RFEESIIKDKNYKEFIKLLNSFYNGTEDELNGRRGRFLELIWDVVGTYNGKEFTQKIDEA
CHHHHHHCCCCHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
IVLENEVKISEKDIDIVYIGEIKDKGIANFIEMHECKASANTTLRTPLKPKHRGKLELMQ
HHCCCCCEECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHH
SVIEISETEEIKCDGLIITFNANKRRLERKLKSYGFEYFKIIPRAEIEERVFNK
HHHHHCCCCCEEECCEEEEECCCHHHHHHHHHHCCCHHHHCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA