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The map label for this gene is fadF [H]

Identifier: 126447501

GI number: 126447501

Start: 1900092

End: 1902017

Strand: Reverse

Name: fadF [H]

Synonym: BMA10247_A1975

Alternate gene names: 126447501

Gene position: 1902017-1900092 (Counterclockwise)

Preceding gene: 126445991

Following gene: 126446814

Centisome position: 80.84

GC content: 70.61

Gene sequence:

>1926_bases
ATGAATCCGGCCATCCTGATTACCGCGCTGCTGTGGCTGTCGGTCGCGGGCCTCGCGTTCGCGGTCGCGAAACGCTCGGC
GTACTGGCGGCTCGGCCGCGCGACCACACCCGGCGCGTTCGGGCTCGCGAACCTGCTGGCGATTCCGAAGCGTTATTTCG
TCGATCTGCACCACGTCGTCGCGCGTGACCCGTACATCGCGAAGACGCACGTCGCGACGGCGGGCGGCGCGCTCGCCGCG
CTCGCGCTCGTGTTCGTCAACTACGGGCTCGCGATCTATTCGCCGTGGCTCGACAGGCTGATCCTGCTCGCGGCGCTCGC
GATGCTCGTCGGCGTGGTGTTCGTCTGGCGCCGCCGCCATGCGAAGGCGGTGCCCGCGCGGTTGTCGCGCGGCCCATGGA
ATACGCTGCCGTGGCTGCTCGGCGCGTTCGCGCTCGGCCTCGTGCTGTTCATGCTGGTGCCGGCGGCGGCGATGTCGGGC
GCGTTCGCGCTGCTCTGCGCGGCGTTGATCGGCGCCGGCGCGTTCGCGATGACGGTGGGAGCGGCCAAGGGCGGGCCGAT
GAAGCACGCGATCGCGGGCTTGCTGCATCTCGCGTTCCATCCTCGTCAGGAGCGCTTCGCGGCGACGCGCGACGCGTACA
CCGGCGACGGCGGCGCGACACCGCCGACCGCGCTGAAGCCGTCCGATGTCGAGCGCGACGAGTACGGCGTCGCGAAGCCG
GCCGAATTCCGCTGGAACCAGTTGCTGAGCTTCGATGCATGCGTGCAGTGCGGCAAATGCGAGGCGGCGTGCCCCGCGTT
CGCGTCGGGCCAGCCGCTCAATCCGAAGAAGCTGATCCAGGATCTCGTCGTCGGAATGGCGGGCGGCACCGATGCCGCGT
ATGCGGGCAGCCCGACGCCCGGCATCCCGGTCGGCGCGCACGGCGGCGATCCGCAGCGGCCGATCGTGTCGTCGCTGATC
GAGGCCGACACGCTGTGGTCGTGCACGACGTGCCGGGCGTGCGTGCAGGAGTGCCCGATGCTGATCGAGCACGTGGATGC
GATCGTCGACATGCGCCGCAACCAGGCGCTCGTGCACGGCGCGGTGCCGGGCAAGGGCGCGCAGGTGCTCGCGAACCTGC
GCGAGACAGGCACGATGGGCGGCTACGACACGGCCGCGCGCTATGACTGGTCGGTCGATCTGGGCGCGCCCGTCGCGCAG
CCGGGGCGCCCCGTCGACGTGCTGATCGTCGCGGGCGAGGGCGCGTTCGACATGCGCTACCAGCGCACGCTGCGCGCACT
CGTGAAGGTGCTCAATCATGCGGGCGTCGATTACGCGGTGCTCGGCCGCGCGGAAACCGACACGGGCGACGTCGCGCGCC
GGCTCGGCGACGAGGCGACGTTCCAGCAGATGGCCAGGCGCCTGATCGACACGCTCGGCGCGCTGTCGTTCAAGCAGATC
GTGACGGCCGATCCACACGTGATGCACAGCCTGCGCAACGAATATCGCGCGCTCGGCGGCCGTTACGCGGTCAAGCATCA
CACGACGTTCGTCGCCGAGCTCGCGGCGGCAGGCAAGATCAAGCCGCAGGCGGCGGACGCGCTGCGCGAGAAGCGCATGA
CATATCACGATCCGTGCTATCTGGGCCGCTACAACGGCGAGACCGAAGCGCCGCGCAAGCTGCTGAAGACGATCGGCATT
CAGATCGTCGAGATGGAGCGGCACGGCATGCGCGGCCGCTGCTGCGGCGGTGGCGGCGGCGCGCCGCTCACCGACATTCC
GGGCAGGCAGCGGATTCCCGACATCCGGATCGCCGACGCGCGCGCGGTGGGCGCGGACGTCGTCGCGGTCGGCTGCCCGA
ACTGCACCGCGATGCTCGAAGGCGTCGTCGGCCCGCGGCCCGACGTGCTCGACGTCGCCGAACTCGTCGCCGCTTCGCTG
GAGTGA

Upstream 100 bases:

>100_bases
ACGGCCGCTTCCTGCTGTTTCGCGTCGGCGATTGCATCTCGATGCACAACATCCACGGCGCGATCTATGACGCGCTGCGC
CTCGTGAAGGATTTCTGACG

Downstream 100 bases:

>100_bases
ACCGATGACCACGCTCAAACGAATCGATCCGCGCCGGCCGTTCGTCGTGACCGCAGCGGGATTGAAACGCATCACGCTCG
GCGAGACGGGCGGCGCGCCC

Product: iron-sulfur cluster binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 641; Mature: 641

Protein sequence:

>641_residues
MNPAILITALLWLSVAGLAFAVAKRSAYWRLGRATTPGAFGLANLLAIPKRYFVDLHHVVARDPYIAKTHVATAGGALAA
LALVFVNYGLAIYSPWLDRLILLAALAMLVGVVFVWRRRHAKAVPARLSRGPWNTLPWLLGAFALGLVLFMLVPAAAMSG
AFALLCAALIGAGAFAMTVGAAKGGPMKHAIAGLLHLAFHPRQERFAATRDAYTGDGGATPPTALKPSDVERDEYGVAKP
AEFRWNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVVGMAGGTDAAYAGSPTPGIPVGAHGGDPQRPIVSSLI
EADTLWSCTTCRACVQECPMLIEHVDAIVDMRRNQALVHGAVPGKGAQVLANLRETGTMGGYDTAARYDWSVDLGAPVAQ
PGRPVDVLIVAGEGAFDMRYQRTLRALVKVLNHAGVDYAVLGRAETDTGDVARRLGDEATFQQMARRLIDTLGALSFKQI
VTADPHVMHSLRNEYRALGGRYAVKHHTTFVAELAAAGKIKPQAADALREKRMTYHDPCYLGRYNGETEAPRKLLKTIGI
QIVEMERHGMRGRCCGGGGGAPLTDIPGRQRIPDIRIADARAVGADVVAVGCPNCTAMLEGVVGPRPDVLDVAELVAASL
E

Sequences:

>Translated_641_residues
MNPAILITALLWLSVAGLAFAVAKRSAYWRLGRATTPGAFGLANLLAIPKRYFVDLHHVVARDPYIAKTHVATAGGALAA
LALVFVNYGLAIYSPWLDRLILLAALAMLVGVVFVWRRRHAKAVPARLSRGPWNTLPWLLGAFALGLVLFMLVPAAAMSG
AFALLCAALIGAGAFAMTVGAAKGGPMKHAIAGLLHLAFHPRQERFAATRDAYTGDGGATPPTALKPSDVERDEYGVAKP
AEFRWNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVVGMAGGTDAAYAGSPTPGIPVGAHGGDPQRPIVSSLI
EADTLWSCTTCRACVQECPMLIEHVDAIVDMRRNQALVHGAVPGKGAQVLANLRETGTMGGYDTAARYDWSVDLGAPVAQ
PGRPVDVLIVAGEGAFDMRYQRTLRALVKVLNHAGVDYAVLGRAETDTGDVARRLGDEATFQQMARRLIDTLGALSFKQI
VTADPHVMHSLRNEYRALGGRYAVKHHTTFVAELAAAGKIKPQAADALREKRMTYHDPCYLGRYNGETEAPRKLLKTIGI
QIVEMERHGMRGRCCGGGGGAPLTDIPGRQRIPDIRIADARAVGADVVAVGCPNCTAMLEGVVGPRPDVLDVAELVAASL
E
>Mature_641_residues
MNPAILITALLWLSVAGLAFAVAKRSAYWRLGRATTPGAFGLANLLAIPKRYFVDLHHVVARDPYIAKTHVATAGGALAA
LALVFVNYGLAIYSPWLDRLILLAALAMLVGVVFVWRRRHAKAVPARLSRGPWNTLPWLLGAFALGLVLFMLVPAAAMSG
AFALLCAALIGAGAFAMTVGAAKGGPMKHAIAGLLHLAFHPRQERFAATRDAYTGDGGATPPTALKPSDVERDEYGVAKP
AEFRWNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVVGMAGGTDAAYAGSPTPGIPVGAHGGDPQRPIVSSLI
EADTLWSCTTCRACVQECPMLIEHVDAIVDMRRNQALVHGAVPGKGAQVLANLRETGTMGGYDTAARYDWSVDLGAPVAQ
PGRPVDVLIVAGEGAFDMRYQRTLRALVKVLNHAGVDYAVLGRAETDTGDVARRLGDEATFQQMARRLIDTLGALSFKQI
VTADPHVMHSLRNEYRALGGRYAVKHHTTFVAELAAAGKIKPQAADALREKRMTYHDPCYLGRYNGETEAPRKLLKTIGI
QIVEMERHGMRGRCCGGGGGAPLTDIPGRQRIPDIRIADARAVGADVVAVGCPNCTAMLEGVVGPRPDVLDVAELVAASL
E

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 68113; Mature: 68113

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: PS00198 4FE4S_FERREDOXIN ; PS01047 HMA_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPAILITALLWLSVAGLAFAVAKRSAYWRLGRATTPGAFGLANLLAIPKRYFVDLHHVV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ARDPYIAKTHVATAGGALAALALVFVNYGLAIYSPWLDRLILLAALAMLVGVVFVWRRRH
HCCCCEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKAVPARLSRGPWNTLPWLLGAFALGLVLFMLVPAAAMSGAFALLCAALIGAGAFAMTVG
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC
AAKGGPMKHAIAGLLHLAFHPRQERFAATRDAYTGDGGATPPTALKPSDVERDEYGVAKP
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AEFRWNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVVGMAGGTDAAYAGSPTP
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
GIPVGAHGGDPQRPIVSSLIEADTLWSCTTCRACVQECPMLIEHVDAIVDMRRNQALVHG
CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC
AVPGKGAQVLANLRETGTMGGYDTAARYDWSVDLGAPVAQPGRPVDVLIVAGEGAFDMRY
CCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHH
QRTLRALVKVLNHAGVDYAVLGRAETDTGDVARRLGDEATFQQMARRLIDTLGALSFKQI
HHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VTADPHVMHSLRNEYRALGGRYAVKHHTTFVAELAAAGKIKPQAADALREKRMTYHDPCY
HCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCE
LGRYNGETEAPRKLLKTIGIQIVEMERHGMRGRCCGGGGGAPLTDIPGRQRIPDIRIADA
EECCCCCCHHHHHHHHHHCCEEEEEHHCCCCCEECCCCCCCCCCCCCCCCCCCCCEEECC
RAVGADVVAVGCPNCTAMLEGVVGPRPDVLDVAELVAASLE
HHCCCCEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MNPAILITALLWLSVAGLAFAVAKRSAYWRLGRATTPGAFGLANLLAIPKRYFVDLHHVV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ARDPYIAKTHVATAGGALAALALVFVNYGLAIYSPWLDRLILLAALAMLVGVVFVWRRRH
HCCCCEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKAVPARLSRGPWNTLPWLLGAFALGLVLFMLVPAAAMSGAFALLCAALIGAGAFAMTVG
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC
AAKGGPMKHAIAGLLHLAFHPRQERFAATRDAYTGDGGATPPTALKPSDVERDEYGVAKP
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AEFRWNQLLSFDACVQCGKCEAACPAFASGQPLNPKKLIQDLVVGMAGGTDAAYAGSPTP
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
GIPVGAHGGDPQRPIVSSLIEADTLWSCTTCRACVQECPMLIEHVDAIVDMRRNQALVHG
CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC
AVPGKGAQVLANLRETGTMGGYDTAARYDWSVDLGAPVAQPGRPVDVLIVAGEGAFDMRY
CCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHH
QRTLRALVKVLNHAGVDYAVLGRAETDTGDVARRLGDEATFQQMARRLIDTLGALSFKQI
HHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VTADPHVMHSLRNEYRALGGRYAVKHHTTFVAELAAAGKIKPQAADALREKRMTYHDPCY
HCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCE
LGRYNGETEAPRKLLKTIGIQIVEMERHGMRGRCCGGGGGAPLTDIPGRQRIPDIRIADA
EECCCCCCHHHHHHHHHHCCEEEEEHHCCCCCEECCCCCCCCCCCCCCCCCCCCCEEECC
RAVGADVVAVGCPNCTAMLEGVVGPRPDVLDVAELVAASLE
HHCCCCEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]