Click here to switch to the map view.

The map label for this gene is etfA [H]

Identifier: 126446814

GI number: 126446814

Start: 1898915

End: 1900087

Strand: Reverse

Name: etfA [H]

Synonym: BMA10247_A1974

Alternate gene names: 126446814

Gene position: 1900087-1898915 (Counterclockwise)

Preceding gene: 126447501

Following gene: 126446398

Centisome position: 80.76

GC content: 72.38

Gene sequence:

>1173_bases
ATGACCACGCTCAAACGAATCGATCCGCGCCGGCCGTTCGTCGTGACCGCAGCGGGATTGAAACGCATCACGCTCGGCGA
GACGGGCGGCGCGCCCGGCGACGCCGCGTCGTGGCGGCCGCATGCGCACGGCGCGGCGGCCGCCAGGCCGGTGCGCGTCG
TGCGCGACGCGCGGCGCGTGTTCCTCGTGGCCGCGCACAGCGAGCGCGGCGCGCTCGACGACCACGCGCGGCAGACGCTC
GCGGCGGCCGCGCTGCTCGCCGATGCGCAGACCGAAGTCGCGCTCGTCGTGTTCGGTGAACTGAACGACGATGCGGGCGC
GTTCGGCGCGGACACGCTCGTCGTGCTGCGCGATTTCGACCGTCGCGCGTTCGCGCCCGAGCGCGAGCTCGACGCGCTGC
GCGCGTGCGCGGCCGCGCTCTCGCCGCAGCACGTGTTCATCCCGGACAACGCGACGGGCGACGGTGATCTCGGCCGCCGT
TACGCGGCGGCGGCGAATGCGAGCGTCGCGACGCAGGTCGTCGAAATCGCGGCGGACCACGTCGGCGTGTACGTCGACGC
GAAGCGCGGCTTCGCGACGCGCACGCTGCCCGATGTCGTGCTGCTCGCGCCGAACGCGGTCGATCCGACACTGCCGTTCG
TCGGCGCGGCGCGCACGCTTGCCGCCCCGGATGCGCGCGCCGCCGGCGACGGCGGTGACGCTCGCTATCGCGACTTCGGC
CTCGAAGAGATCGACGCCGCGCAAGTCGCGCTTGAGGAGGCCGACTTCATCGTGTCGGCCGGCAACGGCGTGACCGACAT
CGCCGCGTTCGAGACGCTTGCGGCGACGTTCGGCGCGGCGATCGGCGCGAGCCGCGTCGCGGTCGACAACGGCCACTTCA
CGCGCGACAAGCAGGTGGGCGCGACGGGCAAGACCGTCGATGCGAGCATCTACATCGCGTTCGGGATTTCGGGCGCGGTT
CAGCATCTGCAAGGGATCAAGGATTGCCGCCACGTGATCGCGGTGAACCTGGACGGCAGCGCGCCGATCGCCAAGCGCGC
GAACCTGACGATCGTCGGCGATGCGCAGGCGACGATCGCGGCGCTGATCGAAGCGGTGAACGCGGCCCGCGCCGCGCAGC
CGCGAGCGGGCGCCGTATCGAACGAGCGCGAGTACATGGGAGCCGCCGCATGA

Upstream 100 bases:

>100_bases
GGCTGCCCGAACTGCACCGCGATGCTCGAAGGCGTCGTCGGCCCGCGGCCCGACGTGCTCGACGTCGCCGAACTCGTCGC
CGCTTCGCTGGAGTGAACCG

Downstream 100 bases:

>100_bases
ACGCGAATCGCAAGCTCGCCAGCATCGCGGTGCTGGTGTCGGTCGGACGCCATTCGGTATCGGGCGTGCCGCGCTACAGC
CGCAACGACGCGGCCGCGCT

Product: putative electron transfer flavoprotein, subunit alpha

Products: NA

Alternate protein names: Alpha-ETF; Electron transfer flavoprotein large subunit; ETFLS [H]

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MTTLKRIDPRRPFVVTAAGLKRITLGETGGAPGDAASWRPHAHGAAAARPVRVVRDARRVFLVAAHSERGALDDHARQTL
AAAALLADAQTEVALVVFGELNDDAGAFGADTLVVLRDFDRRAFAPERELDALRACAAALSPQHVFIPDNATGDGDLGRR
YAAAANASVATQVVEIAADHVGVYVDAKRGFATRTLPDVVLLAPNAVDPTLPFVGAARTLAAPDARAAGDGGDARYRDFG
LEEIDAAQVALEEADFIVSAGNGVTDIAAFETLAATFGAAIGASRVAVDNGHFTRDKQVGATGKTVDASIYIAFGISGAV
QHLQGIKDCRHVIAVNLDGSAPIAKRANLTIVGDAQATIAALIEAVNAARAAQPRAGAVSNEREYMGAAA

Sequences:

>Translated_390_residues
MTTLKRIDPRRPFVVTAAGLKRITLGETGGAPGDAASWRPHAHGAAAARPVRVVRDARRVFLVAAHSERGALDDHARQTL
AAAALLADAQTEVALVVFGELNDDAGAFGADTLVVLRDFDRRAFAPERELDALRACAAALSPQHVFIPDNATGDGDLGRR
YAAAANASVATQVVEIAADHVGVYVDAKRGFATRTLPDVVLLAPNAVDPTLPFVGAARTLAAPDARAAGDGGDARYRDFG
LEEIDAAQVALEEADFIVSAGNGVTDIAAFETLAATFGAAIGASRVAVDNGHFTRDKQVGATGKTVDASIYIAFGISGAV
QHLQGIKDCRHVIAVNLDGSAPIAKRANLTIVGDAQATIAALIEAVNAARAAQPRAGAVSNEREYMGAAA
>Mature_389_residues
TTLKRIDPRRPFVVTAAGLKRITLGETGGAPGDAASWRPHAHGAAAARPVRVVRDARRVFLVAAHSERGALDDHARQTLA
AAALLADAQTEVALVVFGELNDDAGAFGADTLVVLRDFDRRAFAPERELDALRACAAALSPQHVFIPDNATGDGDLGRRY
AAAANASVATQVVEIAADHVGVYVDAKRGFATRTLPDVVLLAPNAVDPTLPFVGAARTLAAPDARAAGDGGDARYRDFGL
EEIDAAQVALEEADFIVSAGNGVTDIAAFETLAATFGAAIGASRVAVDNGHFTRDKQVGATGKTVDASIYIAFGISGAVQ
HLQGIKDCRHVIAVNLDGSAPIAKRANLTIVGDAQATIAALIEAVNAARAAQPRAGAVSNEREYMGAAA

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2025

COG function: function code C; Electron transfer flavoprotein, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF alpha-subunit/fixB family [H]

Homologues:

Organism=Homo sapiens, GI189181759, Length=120, Percent_Identity=43.3333333333333, Blast_Score=89, Evalue=8e-18,
Organism=Homo sapiens, GI4503607, Length=120, Percent_Identity=43.3333333333333, Blast_Score=89, Evalue=9e-18,
Organism=Escherichia coli, GI1787990, Length=126, Percent_Identity=31.7460317460317, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1786226, Length=122, Percent_Identity=34.4262295081967, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17506929, Length=127, Percent_Identity=43.3070866141732, Blast_Score=89, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6325261, Length=120, Percent_Identity=41.6666666666667, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI17136898, Length=107, Percent_Identity=49.5327102803738, Blast_Score=93, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24652801, Length=107, Percent_Identity=49.5327102803738, Blast_Score=93, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001308
- InterPro:   IPR014730
- InterPro:   IPR014731
- InterPro:   IPR018206
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF; PF00766 ETF_alpha [H]

EC number: NA

Molecular weight: Translated: 40276; Mature: 40144

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: PS00696 ETF_ALPHA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLKRIDPRRPFVVTAAGLKRITLGETGGAPGDAASWRPHAHGAAAARPVRVVRDARRV
CCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEE
FLVAAHSERGALDDHARQTLAAAALLADAQTEVALVVFGELNDDAGAFGADTLVVLRDFD
EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCC
RRAFAPERELDALRACAAALSPQHVFIPDNATGDGDLGRRYAAAANASVATQVVEIAADH
HHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHH
VGVYVDAKRGFATRTLPDVVLLAPNAVDPTLPFVGAARTLAAPDARAAGDGGDARYRDFG
EEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHCC
LEEIDAAQVALEEADFIVSAGNGVTDIAAFETLAATFGAAIGASRVAVDNGHFTRDKQVG
CCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCC
ATGKTVDASIYIAFGISGAVQHLQGIKDCRHVIAVNLDGSAPIAKRANLTIVGDAQATIA
CCCCEEEEEEEEEECCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEEEECCHHHHH
ALIEAVNAARAAQPRAGAVSNEREYMGAAA
HHHHHHHHHHHCCCCCCCCCCCHHHCCCCC
>Mature Secondary Structure 
TTLKRIDPRRPFVVTAAGLKRITLGETGGAPGDAASWRPHAHGAAAARPVRVVRDARRV
CCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEE
FLVAAHSERGALDDHARQTLAAAALLADAQTEVALVVFGELNDDAGAFGADTLVVLRDFD
EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCC
RRAFAPERELDALRACAAALSPQHVFIPDNATGDGDLGRRYAAAANASVATQVVEIAADH
HHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHH
VGVYVDAKRGFATRTLPDVVLLAPNAVDPTLPFVGAARTLAAPDARAAGDGGDARYRDFG
EEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHCC
LEEIDAAQVALEEADFIVSAGNGVTDIAAFETLAATFGAAIGASRVAVDNGHFTRDKQVG
CCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCC
ATGKTVDASIYIAFGISGAVQHLQGIKDCRHVIAVNLDGSAPIAKRANLTIVGDAQATIA
CCCCEEEEEEEEEECCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEEEECCHHHHH
ALIEAVNAARAAQPRAGAVSNEREYMGAAA
HHHHHHHHHHHCCCCCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA