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The map label for this gene is rpe [H]

Identifier: 126447297

GI number: 126447297

Start: 1840151

End: 1840846

Strand: Direct

Name: rpe [H]

Synonym: BMA10247_A1908

Alternate gene names: 126447297

Gene position: 1840151-1840846 (Clockwise)

Preceding gene: 126446935

Following gene: 126447367

Centisome position: 78.21

GC content: 66.95

Gene sequence:

>696_bases
ATGACGCAATTCCGCATCGCCCCCAGCATTCTGTCGGCCGATTTCGCGCGGCTCGGCGAAGAAGTCCGCAATGTCGTCGC
CGCCGGCGCCGACTGGATCCACTTCGACGTGATGGACAACCACTACGTGCCGAACCTGACGATCGGCCCGCTCGTCTGCG
AGGCGATCCGCCCGCACGTGCAGGTGCCGATCGACGTGCACCTGATGGTGCGTCCGGTCGACCGGATCGTGCCGGATTTC
GCGAAGGCGGGCGCGAACCTGATCAGCTTTCACCCGGAAGCGTCGGATCACATCGACCGCACGCTCGGCCTGATCCGCGA
TCACGGCTGCAAGGCGGGCCTCGTGTTCAACCCGGCGACGCCGCTCAATTACCTCGATCACGTGATGGATCGCGTCGATC
TCGTGCTGATCATGTCGGTGAACCCCGGCTTCGGCGGCCAGTCGTTCATTCCCGAGGCGCTCAACAAGCTGCGCGAAGCC
CGCGCGCGCATCGACGCGTACACCGCGCGCACCGGCCGCGAGATCCATCTGGAGATCGACGGCGGCGTGAAGGCCGAGAA
CATCGCCGAGATCGCCGCGGCGGGCGCCGATACGTTCGTCGCGGGCTCGGCGATCTTCGGCAAGCCCGACTATCGGCAGG
TGATCGGCGAGATGCGCGACGCGCTCGCCACCGTCGGGCGCGCGTGCGCACGATGA

Upstream 100 bases:

>100_bases
TTCTGCTTGATGAGGCCCCGGCCCGCAACCGGCCGGCGCGTGCCGCGGCGGTAGAATGACGTTTTTCCGTCTTGCAACGC
ACCCCACGCGCCCTCCTCTC

Downstream 100 bases:

>100_bases
CGACGTCGCCTCTCAATGGCGCGCCGCGCATCGAAGCGGCGCTCATCGATCTCGACGGCACGATGGTCGATACCGCAGAC
GATTTCACGGCCGGCCTGAA

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MTQFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQVPIDVHLMVRPVDRIVPDF
AKAGANLISFHPEASDHIDRTLGLIRDHGCKAGLVFNPATPLNYLDHVMDRVDLVLIMSVNPGFGGQSFIPEALNKLREA
RARIDAYTARTGREIHLEIDGGVKAENIAEIAAAGADTFVAGSAIFGKPDYRQVIGEMRDALATVGRACAR

Sequences:

>Translated_231_residues
MTQFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQVPIDVHLMVRPVDRIVPDF
AKAGANLISFHPEASDHIDRTLGLIRDHGCKAGLVFNPATPLNYLDHVMDRVDLVLIMSVNPGFGGQSFIPEALNKLREA
RARIDAYTARTGREIHLEIDGGVKAENIAEIAAAGADTFVAGSAIFGKPDYRQVIGEMRDALATVGRACAR
>Mature_230_residues
TQFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQVPIDVHLMVRPVDRIVPDFA
KAGANLISFHPEASDHIDRTLGLIRDHGCKAGLVFNPATPLNYLDHVMDRVDLVLIMSVNPGFGGQSFIPEALNKLREAR
ARIDAYTARTGREIHLEIDGGVKAENIAEIAAAGADTFVAGSAIFGKPDYRQVIGEMRDALATVGRACAR

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=225, Percent_Identity=37.7777777777778, Blast_Score=158, Evalue=4e-39,
Organism=Homo sapiens, GI219879828, Length=218, Percent_Identity=37.6146788990826, Blast_Score=149, Evalue=2e-36,
Organism=Homo sapiens, GI24307923, Length=180, Percent_Identity=30.5555555555556, Blast_Score=94, Evalue=1e-19,
Organism=Escherichia coli, GI1789788, Length=226, Percent_Identity=70.353982300885, Blast_Score=333, Evalue=8e-93,
Organism=Escherichia coli, GI1790523, Length=202, Percent_Identity=38.1188118811881, Blast_Score=155, Evalue=1e-39,
Organism=Escherichia coli, GI1790754, Length=211, Percent_Identity=29.8578199052133, Blast_Score=96, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17552948, Length=229, Percent_Identity=38.8646288209607, Blast_Score=157, Evalue=5e-39,
Organism=Saccharomyces cerevisiae, GI6322341, Length=241, Percent_Identity=36.5145228215768, Blast_Score=162, Evalue=5e-41,
Organism=Drosophila melanogaster, GI24586301, Length=221, Percent_Identity=36.1990950226244, Blast_Score=151, Evalue=4e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 25139; Mature: 25008

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHV
CCCEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCE
QVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEASDHIDRTLGLIRDHGCKAGLVFNPAT
ECCEEEEEEEECHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCEEECCCC
PLNYLDHVMDRVDLVLIMSVNPGFGGQSFIPEALNKLREARARIDAYTARTGREIHLEID
HHHHHHHHHHHHCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
GGVKAENIAEIAAAGADTFVAGSAIFGKPDYRQVIGEMRDALATVGRACAR
CCCCHHHHHHHHHCCCCHHEECCHHCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TQFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHV
CCEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCE
QVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEASDHIDRTLGLIRDHGCKAGLVFNPAT
ECCEEEEEEEECHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCEEECCCC
PLNYLDHVMDRVDLVLIMSVNPGFGGQSFIPEALNKLREARARIDAYTARTGREIHLEID
HHHHHHHHHHHHCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
GGVKAENIAEIAAAGADTFVAGSAIFGKPDYRQVIGEMRDALATVGRACAR
CCCCHHHHHHHHHCCCCHHEECCHHCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]