Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126447097
Identifier: 126447097
GI number: 126447097
Start: 1963756
End: 1964523
Strand: Reverse
Name: 126447097
Synonym: BMA10247_A2029
Alternate gene names: NA
Gene position: 1964523-1963756 (Counterclockwise)
Preceding gene: 126446263
Following gene: 126447851
Centisome position: 83.5
GC content: 70.05
Gene sequence:
>768_bases GTGCGGGGCGATGCGCGCCGTCGCCCCGTGCATTTCGCGTTTCATCATCATTTTCGAAAAGGACGACCGATGTCTGCCAC CGCACGACGCCCCCTGAAAACCGGCTTTCTCCTCGCGCCCGGCGTTGCCGTGATGGATCTGTTCGGCGCGCACGCCGTGT TCGGCTTCGCGCCGCAATCCGAACTGCACCTGCTTTGGAAGACGCGCGAGCCGATCTCCGCGCTGCCGCCGTTTCCGATC GCGGCGACGACGACCTTCGCCGATTGTCCGGACGAGCTCGACGCGTTCGTCGTCGGCGCGGTGCCGGCCGACGTGATCGC CGACGACGAGGTGATTGCATTCGTGCGCCGGCAGGCGAGCCGCGCGCGCTATGTGATCGGCATTTGCGGCGGCGTGCTGC TGCTCGGCGCGGCGGGCCTGCTGAACGGCCGCCGCGCGACGACCAACTTTCATGTGCTGGACGCGCTCGCCGAGCTCGGC GCGCGGCCCGTCGGCGGCGGCGAGGTCGTGATCGACGGCAACCTGTATACGGCCGGCCCCGCGACGGGCGGCTTCGAGGC GGCGCTGCTCGTGCTGGCCGAACTGCGTGGTGCCGAAGCGGCGAAGCACGTCGAGCTGACGATCGAATATCATCCGCGCG CGCCGTTCGGCGTCGGCACGCCGGCGCTCGCCGGCCCGGCGCTGACCAATGAAGTGCTGGCCGCGCACGCGTGGTTCTTC GATCCGTGCAAGGATGCCGCCAGGGCCGCATACGGGCGCGGGCGCTGA
Upstream 100 bases:
>100_bases AGACGAGGATGTAGACGATCAGGCGCATGGTTCAGGCGTTGGCGGAAACTGCAACCAGTTTGGCATAAGCGCCAATCGGT CGCGCGCTACGCTGATTGTC
Downstream 100 bases:
>100_bases AGGCGCGCCGCACGGCGTGCGCGACGCGGACTCGGGCGCGCGATCGGGCGGCCCGCGCGGCGGCGCGTTTTCGCGGGGAG CAAAGCGGGGCGTGGGCCCG
Product: putative isonitrile hydratase
Products: NA
Alternate protein names: ThiJ/PfpI Family Protein; ThiJ/PfpI Domain Protein; DJ-1/PfpI Family Protein; ThiJ/PfpI; ThiJ Family Protein; Isonitrile Hydratase; DJ-1/PfpI Family; Transcriptional Regulator; AraC Family Transcriptional Regulator; DJ-1/PfpI Superfamily Protein; Twin-Arginine Translocation Pathway Signal; Hydratase; ThiH/PfpI Family Amidotransferase; Intracellular Protease/Amidase; Thij/Pfpi Family Protein; Transcriptional Regulator Protein; ThiJ/PfpI Family Transcriptional Regulator Protein; Transcription Regulator Protein Thij/Pfpi
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MRGDARRRPVHFAFHHHFRKGRPMSATARRPLKTGFLLAPGVAVMDLFGAHAVFGFAPQSELHLLWKTREPISALPPFPI AATTTFADCPDELDAFVVGAVPADVIADDEVIAFVRRQASRARYVIGICGGVLLLGAAGLLNGRRATTNFHVLDALAELG ARPVGGGEVVIDGNLYTAGPATGGFEAALLVLAELRGAEAAKHVELTIEYHPRAPFGVGTPALAGPALTNEVLAAHAWFF DPCKDAARAAYGRGR
Sequences:
>Translated_255_residues MRGDARRRPVHFAFHHHFRKGRPMSATARRPLKTGFLLAPGVAVMDLFGAHAVFGFAPQSELHLLWKTREPISALPPFPI AATTTFADCPDELDAFVVGAVPADVIADDEVIAFVRRQASRARYVIGICGGVLLLGAAGLLNGRRATTNFHVLDALAELG ARPVGGGEVVIDGNLYTAGPATGGFEAALLVLAELRGAEAAKHVELTIEYHPRAPFGVGTPALAGPALTNEVLAAHAWFF DPCKDAARAAYGRGR >Mature_255_residues MRGDARRRPVHFAFHHHFRKGRPMSATARRPLKTGFLLAPGVAVMDLFGAHAVFGFAPQSELHLLWKTREPISALPPFPI AATTTFADCPDELDAFVVGAVPADVIADDEVIAFVRRQASRARYVIGICGGVLLLGAAGLLNGRRATTNFHVLDALAELG ARPVGGGEVVIDGNLYTAGPATGGFEAALLVLAELRGAEAAKHVELTIEYHPRAPFGVGTPALAGPALTNEVLAAHAWFF DPCKDAARAAYGRGR
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27016; Mature: 27016
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGDARRRPVHFAFHHHFRKGRPMSATARRPLKTGFLLAPGVAVMDLFGAHAVFGFAPQS CCCCCCCCCEEHHHHHHHHCCCCCCHHHCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCC ELHLLWKTREPISALPPFPIAATTTFADCPDELDAFVVGAVPADVIADDEVIAFVRRQAS CEEEEEECCCCHHHCCCCCCEECCCCCCCCHHHCEEEEECCCCCHHCCHHHHHHHHHHHH RARYVIGICGGVLLLGAAGLLNGRRATTNFHVLDALAELGARPVGGGEVVIDGNLYTAGP CCEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCEEECCC ATGGFEAALLVLAELRGAEAAKHVELTIEYHPRAPFGVGTPALAGPALTNEVLAAHAWFF CCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHC DPCKDAARAAYGRGR CHHHHHHHHHCCCCC >Mature Secondary Structure MRGDARRRPVHFAFHHHFRKGRPMSATARRPLKTGFLLAPGVAVMDLFGAHAVFGFAPQS CCCCCCCCCEEHHHHHHHHCCCCCCHHHCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCC ELHLLWKTREPISALPPFPIAATTTFADCPDELDAFVVGAVPADVIADDEVIAFVRRQAS CEEEEEECCCCHHHCCCCCCEECCCCCCCCHHHCEEEEECCCCCHHCCHHHHHHHHHHHH RARYVIGICGGVLLLGAAGLLNGRRATTNFHVLDALAELGARPVGGGEVVIDGNLYTAGP CCEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCEEECCC ATGGFEAALLVLAELRGAEAAKHVELTIEYHPRAPFGVGTPALAGPALTNEVLAAHAWFF CCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHC DPCKDAARAAYGRGR CHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA